BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= wdS00334 (686 letters) Database: bee 438 sequences; 146,343 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chlor... 25 0.51 AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 24 1.6 AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly pro... 23 3.6 DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride... 22 4.8 DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride... 22 4.8 DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride... 22 4.8 DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride... 22 4.8 EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 22 6.3 DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein p... 22 6.3 AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.3 Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 21 8.3 D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. 21 8.3 AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly pro... 21 8.3 AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly pro... 21 8.3 AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly pro... 21 8.3 >DQ667188-1|ABG75740.1| 383|Apis mellifera histamine-gated chloride channel protein. Length = 383 Score = 25.4 bits (53), Expect = 0.51 Identities = 8/22 (36%), Positives = 14/22 (63%) Frame = -2 Query: 535 DSQLCFLLLHHTFHNVQQLIFI 470 D+Q+C +++ H Q L+FI Sbjct: 142 DTQICSMMIESLSHTTQDLVFI 163 >AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. Length = 80 Score = 23.8 bits (49), Expect = 1.6 Identities = 12/24 (50%), Positives = 15/24 (62%) Frame = -3 Query: 405 DTSLQANLVRSAKFLHNVDLPTPG 334 DTS A+LVR+A N+D P G Sbjct: 38 DTSHFASLVRNASVSGNLDAPEGG 61 >AF004842-1|AAD01205.1| 598|Apis mellifera major royal jelly protein MRJP5 protein. Length = 598 Score = 22.6 bits (46), Expect = 3.6 Identities = 7/12 (58%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 DE +H++TSN F Sbjct: 221 DESFHRLTSNTF 232 >DQ667192-1|ABG75744.1| 489|Apis mellifera pH-sensitive chloride channel variant 4 protein. Length = 489 Score = 22.2 bits (45), Expect = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 481 LIFIQKRALIFRIIFIQAIVFL 416 LIF + RA F +FI I+ + Sbjct: 294 LIFTRDRAFYFTTVFIPGIILV 315 >DQ667191-1|ABG75743.1| 475|Apis mellifera pH-sensitive chloride channel variant 3 protein. Length = 475 Score = 22.2 bits (45), Expect = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 481 LIFIQKRALIFRIIFIQAIVFL 416 LIF + RA F +FI I+ + Sbjct: 263 LIFTRDRAFYFTTVFIPGIILV 284 >DQ667190-1|ABG75742.1| 509|Apis mellifera pH-sensitive chloride channel variant 1 protein. Length = 509 Score = 22.2 bits (45), Expect = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 481 LIFIQKRALIFRIIFIQAIVFL 416 LIF + RA F +FI I+ + Sbjct: 314 LIFTRDRAFYFTTVFIPGIILV 335 >DQ667189-1|ABG75741.1| 458|Apis mellifera pH-sensitive chloride channel protein. Length = 458 Score = 22.2 bits (45), Expect = 4.8 Identities = 9/22 (40%), Positives = 13/22 (59%) Frame = -2 Query: 481 LIFIQKRALIFRIIFIQAIVFL 416 LIF + RA F +FI I+ + Sbjct: 263 LIFTRDRAFYFTTVFIPGIILV 284 >EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. Length = 570 Score = 21.8 bits (44), Expect = 6.3 Identities = 8/28 (28%), Positives = 15/28 (53%) Frame = +3 Query: 375 TELNSLGGMYQISPKNTIAWMNMILNIN 458 +E+N G+Y K+T+ W L ++ Sbjct: 7 SEINPKEGLYDEGGKHTVHWFRKGLRLH 34 >DQ257415-1|ABB81846.1| 430|Apis mellifera yellow-like protein protein. Length = 430 Score = 21.8 bits (44), Expect = 6.3 Identities = 14/33 (42%), Positives = 20/33 (60%) Frame = +2 Query: 260 SSSFTKYQIKMNSGRTLPNVLVTGTPGVGKSTL 358 S+ T Y+I +S L VL TGT G+G +T+ Sbjct: 125 SAITTAYRIHADSCDRLW-VLDTGTIGIGNTTI 156 >AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter transporter-1A protein. Length = 203 Score = 21.8 bits (44), Expect = 6.3 Identities = 7/23 (30%), Positives = 12/23 (52%) Frame = +2 Query: 377 RTKFAWRDVSNIAQEHNCLDEYD 445 R++ W +N NC++ YD Sbjct: 93 RSELPWGSCNNYWNTKNCVNPYD 115 >Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP57-1 protein. Length = 544 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 D+ +H++TSN F Sbjct: 223 DDSFHRLTSNTF 234 >D79207-1|BAA23639.1| 432|Apis mellifera milk protein protein. Length = 432 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 D+ +H++TSN F Sbjct: 220 DDSFHRLTSNTF 231 >AF388203-1|AAM73637.1| 432|Apis mellifera major royal jelly protein MRJP1 protein. Length = 432 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 D+ +H++TSN F Sbjct: 220 DDSFHRLTSNTF 231 >AF000633-1|AAC61895.1| 432|Apis mellifera major royal jelly protein MRJP1 protein. Length = 432 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 D+ +H++TSN F Sbjct: 220 DDSFHRLTSNTF 231 >AF000632-1|AAC61894.1| 452|Apis mellifera major royal jelly protein MRJP2 protein. Length = 452 Score = 21.4 bits (43), Expect = 8.3 Identities = 6/12 (50%), Positives = 10/12 (83%) Frame = -3 Query: 264 DERYHKITSNNF 229 D+ +H++TSN F Sbjct: 218 DDSFHRLTSNTF 229 Database: bee Posted date: Oct 23, 2007 1:17 PM Number of letters in database: 146,343 Number of sequences in database: 438 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 196,886 Number of Sequences: 438 Number of extensions: 4740 Number of successful extensions: 16 Number of sequences better than 10.0: 15 Number of HSP's better than 10.0 without gapping: 16 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 16 length of database: 146,343 effective HSP length: 56 effective length of database: 121,815 effective search space used: 20952180 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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