Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00333
         (815 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.1  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.1  
AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.     22   6.7  
AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase ...    22   6.7  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    22   6.7  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 22  YNV*CGVNNFFFKTNHPNTDN 84
           YN       +++  NHPN++N
Sbjct: 350 YNYPNPQQQYYYNKNHPNSEN 370


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +1

Query: 22  YNV*CGVNNFFFKTNHPNTDN 84
           YN       +++  NHPN++N
Sbjct: 298 YNYPNPQQQYYYNKNHPNSEN 318


>AY884065-1|AAX84206.1|  697|Tribolium castaneum laccase 1 protein.
          Length = 697

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/22 (31%), Positives = 12/22 (54%)
 Frame = +3

Query: 291 RLNGSFKPYVENTPRRNRPSRK 356
           R +G+F P++   P  + P  K
Sbjct: 185 RSDGTFGPFIVRVPEEDNPHAK 206


>AY295879-1|AAQ62692.1| 1464|Tribolium castaneum chitin synthase
           protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 633 IFDGVPETPKVGTEISNS 686
           +FD  P  P VG+E+  +
Sbjct: 34  VFDDPPREPTVGSEVKRT 51


>AY291477-1|AAQ55061.1| 1464|Tribolium castaneum chitin synthase
           CHS2 protein.
          Length = 1464

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 633 IFDGVPETPKVGTEISNS 686
           +FD  P  P VG+E+  +
Sbjct: 34  VFDDPPREPTVGSEVKRT 51


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 9/21 (42%), Positives = 10/21 (47%)
 Frame = +2

Query: 41  LTIFFLKPTIQIPTTNTYLRS 103
           L IFF+ P    PT   Y  S
Sbjct: 22  LNIFFITPWYDFPTNQKYYPS 42


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 183,428
Number of Sequences: 336
Number of extensions: 3799
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)