Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00331
(676 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_1147 - 34447519-34448042,34448126-34449092,34449458-344496... 34 0.12
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.21
03_06_0519 - 34481751-34482722 32 0.36
04_04_0751 - 27769616-27769684,27769795-27769917,27769998-277707... 31 0.64
01_05_0564 + 23312419-23312987,23314652-23314751,23314832-233150... 31 0.64
07_03_1748 - 29195037-29195427,29195552-29195679,29195810-291959... 31 1.1
06_03_0927 + 26015956-26018230,26018323-26018471,26018550-260186... 30 1.5
09_01_0112 + 1737438-1737777,1738441-1738511,1738974-1739052,174... 30 1.9
01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872 30 1.9
01_01_1130 + 8959909-8960396,8960588-8960638,8960736-8960827,896... 30 1.9
10_08_0271 - 16382655-16384451 29 2.6
01_01_0219 + 1863478-1864041,1864459-1865109 29 2.6
07_03_1136 + 24218601-24218734,24218769-24219906 29 3.4
04_03_1002 - 21617339-21617362,21618476-21618565,21618755-216194... 29 3.4
02_02_0208 + 7856215-7856622 29 3.4
01_01_1064 + 8393519-8394475 29 3.4
09_06_0172 + 21329904-21331512,21331595-21331740,21332333-213325... 29 4.5
04_03_1019 + 21759368-21760546 29 4.5
01_07_0046 - 40714701-40714763,40715266-40715343,40716398-407164... 29 4.5
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 28 5.9
05_01_0361 - 2824728-2826043,2826288-2826507,2827616-2827702,282... 28 5.9
03_02_0155 - 5974118-5974173,5974242-5974314,5974393-5974500,597... 28 5.9
01_06_1683 - 39134826-39135664,39136202-39136278,39136391-391364... 28 5.9
01_05_0754 + 24933860-24934031,24936035-24936104,24936192-249363... 28 5.9
01_01_0668 - 5109476-5110112,5110196-5110439,5110519-5110917,511... 28 5.9
01_01_0079 - 603019-603129,603302-603367,603489-603554,603681-60... 28 5.9
10_01_0129 + 1535823-1537196 28 7.8
09_04_0684 - 19442335-19442990,19443774-19443839,19443935-194440... 28 7.8
05_05_0298 - 23926266-23926442,23926573-23926632,23926822-239270... 28 7.8
05_04_0002 + 17031662-17032264 28 7.8
03_03_0142 + 14800317-14801240 28 7.8
03_02_0816 + 11487811-11488708,11488835-11489235 28 7.8
03_02_0308 - 7297228-7298008,7298495-7298576,7298612-7298669,729... 28 7.8
01_01_0907 + 7128397-7128497,7129944-7130022,7130470-7130568,713... 28 7.8
>02_05_1147 -
34447519-34448042,34448126-34449092,34449458-34449657,
34449867-34450051,34450130-34450228,34450316-34450357,
34450516-34450860,34450956-34451101,34451213-34451296,
34451424-34451502,34451596-34451675,34451824-34451875,
34451992-34452026
Length = 945
Score = 33.9 bits (74), Expect = 0.12
Identities = 19/53 (35%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = +3
Query: 108 EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQS--TPKESPEPQSS 260
+ P+ G A P A STF H Q P ATN +++ N + P + P+P S
Sbjct: 586 QAPQAG--APYPQAASTFPHSQASHPAATNPSTIPQNVATPFAPLQMPQPVPS 636
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 33.1 bits (72), Expect = 0.21
Identities = 20/63 (31%), Positives = 25/63 (39%), Gaps = 1/63 (1%)
Frame = +3
Query: 66 PPGGGHTNIFDSEPEPPRTGRRAV-PPSATSTFSHGQGDEPKATNGTSVATNGQSTPKES 242
PP G N F + P PP R + P+ +T S G P + TNG P
Sbjct: 653 PPAPGIGNKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAP 712
Query: 243 PEP 251
P P
Sbjct: 713 PPP 715
>03_06_0519 - 34481751-34482722
Length = 323
Score = 32.3 bits (70), Expect = 0.36
Identities = 16/45 (35%), Positives = 23/45 (51%)
Frame = +1
Query: 55 GCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEMSRK 189
G APP ++ T + RS R GA P H A+ S+T+ S +
Sbjct: 28 GAEAPPATSSSTPTTARRSKRLAGAPPDHPAEAGPSSTNARRSSR 72
>04_04_0751 -
27769616-27769684,27769795-27769917,27769998-27770770,
27771407-27771773,27772104-27772217,27772307-27772403,
27772968-27773088,27773168-27773252,27773349-27773498,
27773630-27773746,27773819-27773905,27773981-27774049,
27774125-27774181,27774266-27774349,27774477-27774513,
27774721-27774869,27776053-27776538,27776743-27776886,
27776961-27777509,27778332-27778526,27779226-27779310,
27779570-27779670,27779689-27780360,27781101-27781433,
27781957-27782038,27782258-27782334,27782713-27782817,
27783810-27783944,27784437-27785159,27785882-27786663,
27787480-27789187
Length = 2891
Score = 31.5 bits (68), Expect = 0.64
Identities = 24/63 (38%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 96 DSEPEPPRTGRRA-----VPPSATSTFSHGQGDEPKATNGTSVA-TNGQSTPKESPEPQS 257
DS PEPP G+ + P A + G +P + GTSVA T +S P SP P
Sbjct: 10 DSSPEPPPPGQDSDEQFSAVPLADEVRAEGSELDPDTSAGTSVAVTPARSEP--SPPPPR 67
Query: 258 SRR 266
RR
Sbjct: 68 RRR 70
>01_05_0564 +
23312419-23312987,23314652-23314751,23314832-23315055,
23315212-23316041,23316161-23316275,23316786-23316905,
23317410-23317450,23317546-23317595,23317684-23317719,
23317836-23317856
Length = 701
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = +3
Query: 108 EPPRTGRRAVPPS--ATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQS 257
+ PR+G ++ S A ST +HGQ + G + +N QST P++
Sbjct: 410 QSPRSGGTSLNSSGFAASTVNHGQSSVVRTQGGNGIPSNNQSTSSLHQNPRA 461
>07_03_1748 -
29195037-29195427,29195552-29195679,29195810-29195938,
29196334-29196412,29196508-29196671,29196754-29196936,
29197021-29197146,29197237-29197328,29197412-29197508,
29198013-29198339
Length = 571
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = +3
Query: 135 VPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQS 257
+PP+ +T S D P T TS ++ S+P SP +S
Sbjct: 60 IPPARAATPSSQADDVPTTTTATSPPSSAPSSPPSSPPAES 100
>06_03_0927 +
26015956-26018230,26018323-26018471,26018550-26018618,
26018701-26018853,26018927-26019090,26019207-26019354,
26020348-26020470,26020560-26020647,26020781-26020950
Length = 1112
Score = 30.3 bits (65), Expect = 1.5
Identities = 14/58 (24%), Positives = 24/58 (41%)
Frame = +3
Query: 132 AVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSALPKPTV 305
A PP FS+ P +A ++ P+ +P+P+++R P P V
Sbjct: 203 AAPPPLVDVFSNAAAPAPVPVKPQEIAAEVRAPPQANPQPEAARYRQPLSQLPPLPPV 260
>09_01_0112 +
1737438-1737777,1738441-1738511,1738974-1739052,
1741559-1741641,1741733-1741784,1742038-1742105,
1742279-1742345,1742426-1742505,1742576-1742640,
1742785-1742847,1743271-1743427,1743511-1743588,
1743677-1744219,1744321-1744497,1744534-1744788,
1745270-1745329,1745874-1745888,1746123-1746135,
1746819-1746934
Length = 793
Score = 29.9 bits (64), Expect = 1.9
Identities = 19/61 (31%), Positives = 29/61 (47%)
Frame = +3
Query: 111 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSAL 290
PP + + P SA F++ D P A G++V T+ T P+ S L Q+A+
Sbjct: 337 PPDSWHPSSPRSAPHQFNNFGSDNPMAPKGSTV-TSTTDTATFRPQMFSGNGSLSSQTAV 395
Query: 291 P 293
P
Sbjct: 396 P 396
>01_06_0333 + 28528413-28529364,28529504-28529539,28529800-28530872
Length = 686
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/43 (34%), Positives = 19/43 (44%)
Frame = +3
Query: 39 ARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSH 167
A L +R RPP GG T + + P+ P AT F H
Sbjct: 171 ASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDH 213
>01_01_1130 +
8959909-8960396,8960588-8960638,8960736-8960827,
8960964-8961054,8961877-8961937,8962172-8962216,
8962318-8962391,8962565-8962637,8963288-8963345,
8963398-8963468,8963801-8963837,8964040-8964128,
8964207-8964263,8964366-8964449,8964529-8964627,
8964765-8964869,8965145-8965216,8965308-8965497,
8965810-8966207
Length = 744
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/55 (30%), Positives = 25/55 (45%), Gaps = 2/55 (3%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPK-ATNGTSVATNGQSTPKES-PEPQSSR 263
P PP G PPS+ + E + + + TSV G++ P P P S+R
Sbjct: 87 PPPPTNGTLTPPPSSAPSGGRATSSEARESPHATSVDDGGRAPPPPPLPRPTSAR 141
>10_08_0271 - 16382655-16384451
Length = 598
Score = 29.5 bits (63), Expect = 2.6
Identities = 23/77 (29%), Positives = 30/77 (38%), Gaps = 10/77 (12%)
Frame = +3
Query: 42 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVP----------PSATSTFSHGQGDEPKA 191
R +S V R GGG T+ P PP G A P PS +T H + A
Sbjct: 64 RKASPVDRGGGGGGTSFSGHSPSPPDAGGSAKPESPHDSGVKAPSELTTVEHTKQPSEPA 123
Query: 192 TNGTSVATNGQSTPKES 242
+ GT G+ + S
Sbjct: 124 STGTESDDGGKPSSASS 140
>01_01_0219 + 1863478-1864041,1864459-1865109
Length = 404
Score = 29.5 bits (63), Expect = 2.6
Identities = 16/46 (34%), Positives = 23/46 (50%)
Frame = -1
Query: 157 VLVALGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPT 20
+L +L ++ RP++ S S VWPPP ST +P PT
Sbjct: 46 MLHSLVPSSSRPIMQPSPSPETPCVWPPPLPSSTPTPAPSPPSTPT 91
>07_03_1136 + 24218601-24218734,24218769-24219906
Length = 423
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/33 (51%), Positives = 17/33 (51%)
Frame = -1
Query: 142 GGTARRPVLGGSGSESKMLVWPPPGGRSTLLDR 44
GG A R VLGG G L PP GGR L R
Sbjct: 140 GGGAPRRVLGGGGGGGA-LARPPGGGRGGALGR 171
>04_03_1002 -
21617339-21617362,21618476-21618565,21618755-21619432,
21619536-21619772,21619849-21619896,21619995-21620045,
21620301-21620426,21620557-21620697,21621165-21621401,
21622467-21622571,21622812-21622982,21623306-21623380,
21623754-21623936,21624151-21624297,21624365-21624472,
21624605-21624709,21625109-21625213,21625322-21625381,
21625512-21625579,21625876-21625954,21626208-21626267,
21626445-21626498,21626834-21626886,21627405-21627494,
21628265-21628362,21628464-21628852
Length = 1193
Score = 29.1 bits (62), Expect = 3.4
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 3/74 (4%)
Frame = +3
Query: 51 SRVLRPPGGGHTNIFDSEPEPPRT---GRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 221
SR GGG + P P RT GR + P S++S G+ P +++ T
Sbjct: 17 SRRTSAAGGGAGVAAAAHPPPARTSSGGRPSTPSSSSSAAGGGRPTTPSSSSAGGRPTTP 76
Query: 222 QSTPKESPEPQSSR 263
+ S P S R
Sbjct: 77 SAAFARSTTPSSGR 90
>02_02_0208 + 7856215-7856622
Length = 135
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/67 (29%), Positives = 26/67 (38%), Gaps = 1/67 (1%)
Frame = +3
Query: 72 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATN-GTSVATNGQSTPKESPE 248
G G + EP PP T P + F+ +A GTSV N S+ +
Sbjct: 68 GSGVLKLAPGEPAPPTT--TPTIPLGINNFTASAAQALQAGRIGTSVLANASSSHRSGHH 125
Query: 249 PQSSRRH 269
S RRH
Sbjct: 126 GSSKRRH 132
>01_01_1064 + 8393519-8394475
Length = 318
Score = 29.1 bits (62), Expect = 3.4
Identities = 18/68 (26%), Positives = 32/68 (47%)
Frame = +3
Query: 111 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSAL 290
PPR R A PP + + + A++ +S +T+ S+ S +S+RR + + L
Sbjct: 155 PPRRARSASPPRSPHLAKIAEPSDSFASSSSS-STSTSSSSSSSSSAKSTRRRISLRDLL 213
Query: 291 PKPTVQSE 314
T S+
Sbjct: 214 LGSTANSD 221
>09_06_0172 +
21329904-21331512,21331595-21331740,21332333-21332556,
21333689-21334448
Length = 912
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/39 (35%), Positives = 17/39 (43%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 221
P PP A PP S + +G G P G +VA G
Sbjct: 167 PPPPYGSGYAPPPPYGSGYGYGYGPAPDYGGGMAVANGG 205
>04_03_1019 + 21759368-21760546
Length = 392
Score = 28.7 bits (61), Expect = 4.5
Identities = 14/31 (45%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Frame = +3
Query: 171 QGDEPKATNG-TSVATNGQSTPKESPEPQSS 260
QG E T+G TS +T+G S P SP P ++
Sbjct: 247 QGSEILPTSGATSSSTSGHSVPSPSPSPSAA 277
>01_07_0046 -
40714701-40714763,40715266-40715343,40716398-40716462,
40717075-40717201,40717279-40717319,40717621-40717690,
40718070-40718191,40719047-40719107,40719182-40719292,
40719387-40719461,40719815-40719842,40719929-40719978,
40720228-40720290,40720385-40720426,40720562-40720631,
40720663-40720713,40721857-40722041,40722374-40722775
Length = 567
Score = 28.7 bits (61), Expect = 4.5
Identities = 19/42 (45%), Positives = 23/42 (54%)
Frame = -1
Query: 145 LGGTARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPT 20
LG TAR P S + + +V PPP RST R A + RPT
Sbjct: 124 LGRTARSP----SPALGRNIVEPPPTVRSTSAGRPAVASRPT 161
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/76 (26%), Positives = 35/76 (46%), Gaps = 3/76 (3%)
Frame = +3
Query: 69 PGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESP- 245
PGG +++FDS P PP A PS++++ + P A + + P
Sbjct: 204 PGGFISSLFDSMP-PPTLDTAAAEPSSSASAERREPPPPAPDEHQPSAAAREVAEGKRPA 262
Query: 246 --EPQSSRRHLLQQSA 287
E ++RR + Q++A
Sbjct: 263 AAEAATTRRAMTQKAA 278
>05_01_0361 -
2824728-2826043,2826288-2826507,2827616-2827702,
2827726-2827980,2828704-2828733
Length = 635
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 4/65 (6%)
Frame = +3
Query: 114 PRTGRRAVPPSATSTFSHGQGDEPKATNGTSVA----TNGQSTPKESPEPQSSRRHLLQQ 281
PR G P S++ H D+ + ++A TNG TP++ + QSS R ++
Sbjct: 199 PRVGE---PSSSSCPPDHDDDDQEQIIVARTLASLNQTNGGKTPQQKEKQQSSNRPSSRR 255
Query: 282 SALPK 296
+ PK
Sbjct: 256 PSYPK 260
>03_02_0155 -
5974118-5974173,5974242-5974314,5974393-5974500,
5975189-5976914,5977065-5977620,5978008-5978485
Length = 998
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 2/49 (4%)
Frame = +3
Query: 99 SEPEPPRTGRRAVPPSATSTFSHGQ--GDEPKATNGTSVATNGQSTPKE 239
S P PP + VPPS T+ + GQ EP+ G + G E
Sbjct: 94 SPPPPPPSSPPPVPPSPTAAPTTGQSWNSEPERKEGATATDVGHDVKTE 142
>01_06_1683 -
39134826-39135664,39136202-39136278,39136391-39136441,
39136581-39136654,39136782-39136870,39137152-39137234,
39138067-39138241,39138348-39138501
Length = 513
Score = 28.3 bits (60), Expect = 5.9
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = +1
Query: 4 HEHHSTLASMTELVYQAGCSAPPVVATL 87
H HHS A+ + +QA + PP A L
Sbjct: 315 HHHHSAAAAWPTIAFQAAAAPPPHAAGL 342
>01_05_0754 +
24933860-24934031,24936035-24936104,24936192-24936316,
24936539-24936677,24936926-24937022,24937105-24937170,
24937478-24937616,24938149-24938258,24938355-24938459,
24938579-24938686
Length = 376
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/62 (25%), Positives = 26/62 (41%)
Frame = +1
Query: 1 RHEHHSTLASMTELVYQAGCSAPPVVATLTSSIPNRSHRGPGAVPFHQAQRALSATDKEM 180
RH+ +++ + ++ G A VV + + S PG P+H R S E
Sbjct: 169 RHDFYNSATEVVLTIFAKGVPAENVVVDFGEQMLSVSIEVPGEEPYHFQPRLFSKIIPEK 228
Query: 181 SR 186
SR
Sbjct: 229 SR 230
>01_01_0668 -
5109476-5110112,5110196-5110439,5110519-5110917,
5111390-5111668,5111886-5112257,5112371-5112475,
5112832-5112909,5112990-5113199,5113287-5113406,
5113508-5113606,5113685-5113750,5113914-5114141,
5114216-5114521,5115324-5115381
Length = 1066
Score = 28.3 bits (60), Expect = 5.9
Identities = 19/55 (34%), Positives = 25/55 (45%)
Frame = +3
Query: 99 SEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSR 263
S PP T A P ATS+ HG+G PK G + P + P++SR
Sbjct: 318 SHDRPPSTV--AAPKPATSSRYHGRGGAPK--KGEHLPFAPSYPPSHAQGPENSR 368
>01_01_0079 -
603019-603129,603302-603367,603489-603554,603681-603824,
603932-604429
Length = 294
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/55 (25%), Positives = 22/55 (40%)
Frame = +3
Query: 99 SEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSR 263
S+P PP +RA P Q + N + A++ +P SP P +
Sbjct: 153 SKPPPPAAKKRACPSGEARAAGKKQCRKGSKPNKAASASSPSPSPSPSPSPNKEQ 207
>10_01_0129 + 1535823-1537196
Length = 457
Score = 27.9 bits (59), Expect = 7.8
Identities = 16/43 (37%), Positives = 19/43 (44%)
Frame = -1
Query: 136 TARRPVLGGSGSESKMLVWPPPGGRSTLLDRRAPSLRPTLNGA 8
+ RR GG G PPGG S L R S RP +G+
Sbjct: 5 SGRRLAAGGGGGGGGAPRGSPPGGGSPLNSSRRSSRRPRPSGS 47
>09_04_0684 -
19442335-19442990,19443774-19443839,19443935-19444032,
19444787-19445157
Length = 396
Score = 27.9 bits (59), Expect = 7.8
Identities = 24/76 (31%), Positives = 30/76 (39%)
Frame = +3
Query: 66 PPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESP 245
PPG G F+S P P G+ VPP H QG+ P + N Q +P
Sbjct: 240 PPGQG----FNSPPPP---GQGPVPPRDAPPMHHAQGNVPPPPPPNAGPPNYQ---PHAP 289
Query: 246 EPQSSRRHLLQQSALP 293
PQ + QQ P
Sbjct: 290 NPQGYTNY--QQGGAP 303
>05_05_0298 -
23926266-23926442,23926573-23926632,23926822-23927029,
23927471-23927703,23928806-23928860,23928943-23929649
Length = 479
Score = 27.9 bits (59), Expect = 7.8
Identities = 10/33 (30%), Positives = 19/33 (57%)
Frame = +2
Query: 401 PHPLAVSLYNQIFDFHLTHIMSQICIEAKFFLR 499
PHP ++L++ D H H++ ++C + F R
Sbjct: 96 PHPNVINLHDVYEDVHGVHLVLELCSGGELFDR 128
>05_04_0002 + 17031662-17032264
Length = 200
Score = 27.9 bits (59), Expect = 7.8
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +3
Query: 120 TGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 233
+G+R P S+TST + G GD+ + +S +++ ++P
Sbjct: 54 SGKRGPPTSSTSTMASG-GDDDEEEGASSSSSSADTSP 90
>03_03_0142 + 14800317-14801240
Length = 307
Score = 27.9 bits (59), Expect = 7.8
Identities = 14/35 (40%), Positives = 18/35 (51%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSV 209
P P R G A P+A +T G E +T GTS+
Sbjct: 198 PPPARKGLSACNPAAATTTPGGAAAESASTAGTSL 232
>03_02_0816 + 11487811-11488708,11488835-11489235
Length = 432
Score = 27.9 bits (59), Expect = 7.8
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 5/71 (7%)
Frame = +1
Query: 61 SAPPVVATLTSSIPNRSHRGPGAV--PFHQAQ---RALSATDKEMSRKRPTALQ*RPTVS 225
+APPVV T S P + P A P Q Q + + + R+R PT++
Sbjct: 52 AAPPVVCTPPSPPPPFRQKVPVATYSPSSQGQPPQQQMHPAPTPVRRRRSCDAPRSPTIA 111
Query: 226 PLLRRARSHSP 258
P RRA SP
Sbjct: 112 PEHRRASCDSP 122
>03_02_0308 -
7297228-7298008,7298495-7298576,7298612-7298669,
7298723-7298835,7298924-7299034,7299480-7299597,
7299706-7299809,7300570-7300665,7301806-7302307
Length = 654
Score = 27.9 bits (59), Expect = 7.8
Identities = 21/67 (31%), Positives = 28/67 (41%)
Frame = +3
Query: 57 VLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPK 236
V PPG GH + P T ++ +ST S K+T+ NG +PK
Sbjct: 545 VFLPPGSGH-----ALPHQMMTASQSPAEPISSTDSSAYVHN-KSTSTMGEMANGDVSPK 598
Query: 237 ESPEPQS 257
SP QS
Sbjct: 599 SSPAKQS 605
>01_01_0907 +
7128397-7128497,7129944-7130022,7130470-7130568,
7130654-7130767,7130960-7131102,7131716-7131797,
7132425-7132510,7132879-7133112,7134684-7135162,
7135309-7136027
Length = 711
Score = 27.9 bits (59), Expect = 7.8
Identities = 15/58 (25%), Positives = 24/58 (41%)
Frame = +3
Query: 141 PSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSALPKPTVQSE 314
P + +G P + TS NGQ +P Q + + Q ALP P +++
Sbjct: 430 PQQVGLYPNGGAVNPGTSYPTSSGWNGQIANNATPPAQQTVNYDEQSGALPPPPWEAQ 487
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,801,434
Number of Sequences: 37544
Number of extensions: 416020
Number of successful extensions: 1833
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 1691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1822
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1714968940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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