Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00331
(676 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction... 33 0.25
U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction... 33 0.25
U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction... 33 0.25
AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical ... 31 0.57
Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical pr... 30 1.7
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 1.7
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 30 1.7
L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting... 30 1.7
L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting... 30 1.7
L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting... 30 1.7
AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical ... 29 2.3
Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical pr... 29 3.0
AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical ... 29 3.0
U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical p... 29 4.0
U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical p... 28 5.3
U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical pr... 28 5.3
U13019-16|AAK84569.1| 311|Caenorhabditis elegans Serpentine rec... 28 5.3
AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical ... 28 7.0
AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical... 28 7.0
AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like p... 28 7.0
AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolo... 28 7.0
U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical pr... 27 9.2
AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical ... 27 9.2
>U39650-3|AAK39188.1| 1148|Caenorhabditis elegans Apical junction
molecule protein1, isoform c protein.
Length = 1148
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 251
P+ R R + TST+ +G G EP +T T+ NG S+ +++P P
Sbjct: 1050 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1099
>U39650-2|AAM51517.1| 1439|Caenorhabditis elegans Apical junction
molecule protein1, isoform d protein.
Length = 1439
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 251
P+ R R + TST+ +G G EP +T T+ NG S+ +++P P
Sbjct: 1009 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1058
>U39650-1|AAK39187.1| 1480|Caenorhabditis elegans Apical junction
molecule protein1, isoform a protein.
Length = 1480
Score = 32.7 bits (71), Expect = 0.25
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVAT-NGQSTPKESPEP 251
P+ R R + TST+ +G G EP +T T+ NG S+ +++P P
Sbjct: 1050 PDWYRENRPQGQTAQTSTYRYGNGVEPMSTTTTTTTVINGTSSHQQAPPP 1099
>AL031629-6|CAA20980.2| 948|Caenorhabditis elegans Hypothetical
protein Y106G6D.7 protein.
Length = 948
Score = 31.5 bits (68), Expect = 0.57
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 3/105 (2%)
Frame = +3
Query: 6 RAP-FNVGLNDGARLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDE 182
+AP FN N G + + P T++ ++ PP+TGR+ + P+ + F Q
Sbjct: 294 KAPEFNNDFNGGNKFNQ--FPPRNAQSTDLSENRAAPPQTGRKTLMPTPQAPF---QNAP 348
Query: 183 PKATNGTSVATNGQSTPKESPEPQSSRRHLLQ--QSALPKPTVQS 311
TNG S N P ++ P + R+ Q+ +P P +Q+
Sbjct: 349 APFTNGPSDDVN---RPFQTGPPGNLGRNGPPPFQAGVPPPVIQN 390
>Z82083-3|CAB04971.1| 756|Caenorhabditis elegans Hypothetical
protein ZK1010.5 protein.
Length = 756
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/68 (25%), Positives = 28/68 (41%)
Frame = +3
Query: 108 EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSA 287
EP T A+P T + P + + + PK +PEP + + Q +A
Sbjct: 557 EPLSTASTALPDETTDAPEEPATEVPNPQPPSPPSPEPEPEPKSTPEPVTDGPNESQSTA 616
Query: 288 LPKPTVQS 311
LP+ T +
Sbjct: 617 LPQQTTDA 624
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/61 (37%), Positives = 31/61 (50%), Gaps = 5/61 (8%)
Frame = +3
Query: 102 EPEPP---RT--GRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRR 266
+PEPP RT G RA PP+ATST+ G G A++ + P + P P +S
Sbjct: 128 KPEPPTMPRTIQGFRAPPPAATSTYRPPHGSN-YDNYGREPASSRRPYPPQQP-PSTSAP 185
Query: 267 H 269
H
Sbjct: 186 H 186
>Z96047-4|CAB09414.1| 796|Caenorhabditis elegans Hypothetical
protein DY3.5 protein.
Length = 796
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/73 (21%), Positives = 30/73 (41%)
Frame = +3
Query: 81 HTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSS 260
H ++ + P + VPP + +T + +G P + +A + PK P P +
Sbjct: 590 HGSVISQQQVVPPRPVQPVPPMSVATVT--RGPPPPTRPASVIAPSSSVVPKSQPRPSPT 647
Query: 261 RRHLLQQSALPKP 299
R + + P P
Sbjct: 648 TRPPTRATIRPTP 660
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/77 (29%), Positives = 36/77 (46%), Gaps = 6/77 (7%)
Frame = +3
Query: 87 NIFDSEPEPPRTGRRAVPP---SATSTFSHGQGDEP--KATNGTSVATNGQSTPKESPEP 251
N F +P PP + RRA PP ++ S DE + + + + N P+E P
Sbjct: 14 NRFRKQPPPPPSPRRAPPPPPHRKPASLSPPPDDENTIRPPSSSESSENIPEEPQELITP 73
Query: 252 QSSRRHL-LQQSALPKP 299
++RR L + + PKP
Sbjct: 74 NTTRRSLGPKPTVAPKP 90
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
Frame = +3
Query: 63 RPPG---GGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 233
RPP GGH N D +PP++ + P ++TST + T T+ T +T
Sbjct: 34 RPPSSYHGGHHNDDDCTTKPPKS--TSTPSTSTSTPT--TTTTTTTTTTTTPTTTTTTTT 89
Query: 234 KESPEPQSSR 263
+PEP +++
Sbjct: 90 TTTPEPTTTK 99
>L15188-6|AAA27950.2| 1132|Caenorhabditis elegans Gex interacting
protein protein8, isoform a protein.
Length = 1132
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 LSSRVLRPPGGGHTNIFDSEP--EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 218
LS ++L GGH F P + P T + PP T + D+ + N + +
Sbjct: 647 LSPKIL---SGGHKPDFPPVPRIQKPSTSSQPPPPEPMDT-KENESDDGEEDNDI-LEID 701
Query: 219 GQSTPKESPEPQSSRRHLLQQSAL 290
P + P P SS HL+ S++
Sbjct: 702 VDEPPAKRPTPTSSSSHLIGSSSV 725
>L15188-5|AAA27949.3| 1780|Caenorhabditis elegans Gex interacting
protein protein8, isoform b protein.
Length = 1780
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 LSSRVLRPPGGGHTNIFDSEP--EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 218
LS ++L GGH F P + P T + PP T + D+ + N + +
Sbjct: 647 LSPKIL---SGGHKPDFPPVPRIQKPSTSSQPPPPEPMDT-KENESDDGEEDNDI-LEID 701
Query: 219 GQSTPKESPEPQSSRRHLLQQSAL 290
P + P P SS HL+ S++
Sbjct: 702 VDEPPAKRPTPTSSSSHLIGSSSV 725
>L15188-4|AAM22026.1| 1697|Caenorhabditis elegans Gex interacting
protein protein8, isoform c protein.
Length = 1697
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/84 (27%), Positives = 36/84 (42%), Gaps = 2/84 (2%)
Frame = +3
Query: 45 LSSRVLRPPGGGHTNIFDSEP--EPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATN 218
LS ++L GGH F P + P T + PP T + D+ + N + +
Sbjct: 647 LSPKIL---SGGHKPDFPPVPRIQKPSTSSQPPPPEPMDT-KENESDDGEEDNDI-LEID 701
Query: 219 GQSTPKESPEPQSSRRHLLQQSAL 290
P + P P SS HL+ S++
Sbjct: 702 VDEPPAKRPTPTSSSSHLIGSSSV 725
>AF125969-1|AAD14762.2| 1484|Caenorhabditis elegans Hypothetical
protein Y38C9A.1 protein.
Length = 1484
Score = 29.5 bits (63), Expect = 2.3
Identities = 12/54 (22%), Positives = 30/54 (55%)
Frame = +3
Query: 153 STFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSALPKPTVQSE 314
+TF + D+ N ++ + +STP +P ++++H ++Q + T++S+
Sbjct: 889 NTFKRKKRDDGMFDNCVEISLSTRSTPSPAPGEATAKQHHIKQYRVKSSTLRSD 942
>Z48716-1|CAA88601.1| 482|Caenorhabditis elegans Hypothetical
protein F59B10.2 protein.
Length = 482
Score = 29.1 bits (62), Expect = 3.0
Identities = 13/57 (22%), Positives = 32/57 (56%)
Frame = +3
Query: 96 DSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRR 266
+S+ E + + A+S+ ++G E + ++ +S +T + TPK+ +PQ +++
Sbjct: 244 ESKSESQVSSSKTSTSKASSSKAYGSDFESEKSSSSSASTISKVTPKKLDKPQKTKK 300
>Z47072-2|CAA87369.3| 1317|Caenorhabditis elegans Hypothetical
protein F26C11.3 protein.
Length = 1317
Score = 29.1 bits (62), Expect = 3.0
Identities = 20/63 (31%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Frame = +3
Query: 75 GGH-TNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEP 251
GGH T+ F + E P T + +ATST S + TS NG +T + P
Sbjct: 423 GGHSTSTFGTTSETPET---STDFTATSTSSSSDSSTQSSNAQTSTIENGSTTTNFTSAP 479
Query: 252 QSS 260
+S
Sbjct: 480 STS 482
>AC006797-1|AAF60743.1| 1079|Caenorhabditis elegans Hypothetical
protein Y51B11A.1 protein.
Length = 1079
Score = 29.1 bits (62), Expect = 3.0
Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 8/90 (8%)
Frame = +3
Query: 66 PPGGGHTNIFDSEPEPPRTGRRAVPPSA-------TSTFSHGQGDEPKATNGTSVATNGQ 224
PP T + + P T R P S+ T+T EP +++ T V T
Sbjct: 341 PPSSSTTPVQTTTTTAPETTRTEPPSSSTTPVQNTTTTAPETTSTEPPSSSTTPVQTTTT 400
Query: 225 STPK-ESPEPQSSRRHLLQQSALPKPTVQS 311
+ P+ S EP SS +Q + + P S
Sbjct: 401 TAPETTSTEPPSSSTTPVQTTTITAPETTS 430
>U58755-10|AAB00699.1| 2761|Caenorhabditis elegans Hypothetical
protein C34D4.14 protein.
Length = 2761
Score = 28.7 bits (61), Expect = 4.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 177 DEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQSALP 293
DE + T+G SVA+ GQ+ ES + Q+ L A+P
Sbjct: 1718 DERQKTSGPSVASTGQAASAESLQHQTPSLENLLARAMP 1756
>U29380-10|AAO38582.1| 454|Caenorhabditis elegans Hypothetical
protein ZK546.14b protein.
Length = 454
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/71 (21%), Positives = 27/71 (38%)
Frame = +3
Query: 102 EPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQ 281
E + P ++ S+ G+EP+ NG A + ST +E P + + Q
Sbjct: 129 ETDEPVAKKQKKEESSDDDEDSEDGEEPEGNNGAVEAEDSDSTDEEEETPSKPNKTVAQS 188
Query: 282 SALPKPTVQSE 314
+ + E
Sbjct: 189 TLKSNGKIDKE 199
>U29380-9|AAA68745.1| 472|Caenorhabditis elegans Hypothetical
protein ZK546.14a protein.
Length = 472
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/71 (21%), Positives = 27/71 (38%)
Frame = +3
Query: 102 EPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPEPQSSRRHLLQQ 281
E + P ++ S+ G+EP+ NG A + ST +E P + + Q
Sbjct: 147 ETDEPVAKKQKKEESSDDDEDSEDGEEPEGNNGAVEAEDSDSTDEEEETPSKPNKTVAQS 206
Query: 282 SALPKPTVQSE 314
+ + E
Sbjct: 207 TLKSNGKIDKE 217
>U13019-16|AAK84569.1| 311|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 6 protein.
Length = 311
Score = 28.3 bits (60), Expect = 5.3
Identities = 16/33 (48%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Frame = +2
Query: 410 LAVSLYNQIFD---FHLTHIMSQICIEAKFFLR 499
LA+SL N FD + LT + QIC FFLR
Sbjct: 66 LALSLLNLFFDIFYYRLTLFVPQICESFSFFLR 98
>AL132860-5|CAB60515.1| 798|Caenorhabditis elegans Hypothetical
protein Y56A3A.6 protein.
Length = 798
Score = 27.9 bits (59), Expect = 7.0
Identities = 18/46 (39%), Positives = 22/46 (47%)
Frame = +3
Query: 111 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPE 248
PP T R + PPSATS+ DE T G+ V T + E E
Sbjct: 66 PPGTVRASFPPSATSSVVSDGSDE---TAGSVVVTRKSNIVLEDEE 108
>AL031630-13|CAA20992.1| 814|Caenorhabditis elegans Hypothetical
protein Y38H6C.14 protein.
Length = 814
Score = 27.9 bits (59), Expect = 7.0
Identities = 22/86 (25%), Positives = 35/86 (40%), Gaps = 1/86 (1%)
Frame = +3
Query: 42 RLSSRVLRPPGGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNG 221
+ R+ G G + S+ + GRR+ S + TF +G E + +G
Sbjct: 709 KFEERMKSAKGRGIERV-QSQEKQQSIGRRSSEVSGSGTFVVDKGYEESFESEDKSEKSG 767
Query: 222 QSTPKESPE-PQSSRRHLLQQSALPK 296
STP ES +S +S+ PK
Sbjct: 768 SSTPSESGSGSESENESRSSRSSKPK 793
>AF300704-1|AAG24400.1| 622|Caenorhabditis elegans incenp-like
protein ICP-1 protein.
Length = 622
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST-PKESPEPQSSRRHLLQQS 284
P + R + P+A ST + G+G K + ++GQ T P P + S LQ++
Sbjct: 303 PNKAASRKIFPTAESTSTPGRGPAKKGKVEILIGSDGQKTAPVAQPTVELSPSRELQRN 361
>AC025716-5|AAK39616.1| 622|Caenorhabditis elegans Incenp homolog
protein 1 protein.
Length = 622
Score = 27.9 bits (59), Expect = 7.0
Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 1/59 (1%)
Frame = +3
Query: 111 PPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQST-PKESPEPQSSRRHLLQQS 284
P + R + P+A ST + G+G K + ++GQ T P P + S LQ++
Sbjct: 303 PNKAASRKIFPTAESTSTPGRGPAKKGKVEILIGSDGQKTAPVAQPTVELSPSRELQRN 361
>U10402-8|AAA19070.2| 1024|Caenorhabditis elegans Hypothetical protein
C34E10.8 protein.
Length = 1024
Score = 27.5 bits (58), Expect = 9.2
Identities = 13/43 (30%), Positives = 19/43 (44%)
Frame = +3
Query: 105 PEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTP 233
P P RA +A SH + + P A+ +S A+ Q P
Sbjct: 925 PTPSGRTPRAAAIAANQAISHSKPNVPSASTSSSAASTDQENP 967
>AL132863-1|CAB60573.1| 477|Caenorhabditis elegans Hypothetical
protein Y37H2A.1 protein.
Length = 477
Score = 27.5 bits (58), Expect = 9.2
Identities = 22/66 (33%), Positives = 27/66 (40%), Gaps = 2/66 (3%)
Frame = +3
Query: 72 GGGHTNIFDSEPEPPRTGRRAVPPSATSTFSHGQGDEPKATNGTSVATNGQSTPKESPE- 248
GG + S P PP RR + P S P GT+ +TNG P + P
Sbjct: 85 GGAAPTMHHSRPPPPPLDRRPMSPQNAS--------RPLPVRGTNYSTNG-DWPDQRPTI 135
Query: 249 -PQSSR 263
QSSR
Sbjct: 136 IQQSSR 141
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,976,720
Number of Sequences: 27780
Number of extensions: 311721
Number of successful extensions: 1236
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1060
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1228
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1529108810
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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