Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00328
         (756 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    25   2.5  
DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormo...    25   3.3  
AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled ...    25   3.3  

>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 25.0 bits (52), Expect = 2.5
 Identities = 14/32 (43%), Positives = 16/32 (50%)
 Frame = +1

Query: 493  PSRPNFLKVK*EPQSNRSSLQLGTRGADSAPT 588
            PS P       EP+S  S    GT GA +APT
Sbjct: 1490 PSVPPATTTDLEPESGVSEAPPGTDGAAAAPT 1521


>DQ396551-1|ABD60146.1|  354|Anopheles gambiae adipokinetic hormone
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 562 FPTVVNFYCFGALI*LLRSWGETGPRQSKASRALTLHCDIVHKRHEALLRI 410
           FP +V  YC+G++      +  T PR  ++ R  ++  D++ +     LR+
Sbjct: 223 FPLIVILYCYGSI--YYEIFSRTNPRNLESFRRSSI--DVLGRAKRKTLRM 269


>AY298745-1|AAQ63187.1|  354|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 354

 Score = 24.6 bits (51), Expect = 3.3
 Identities = 13/51 (25%), Positives = 26/51 (50%)
 Frame = -3

Query: 562 FPTVVNFYCFGALI*LLRSWGETGPRQSKASRALTLHCDIVHKRHEALLRI 410
           FP +V  YC+G++      +  T PR  ++ R  ++  D++ +     LR+
Sbjct: 223 FPLIVILYCYGSI--YYEIFSRTNPRNLESFRRSSI--DVLGRAKRKTLRM 269


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 458,647
Number of Sequences: 2352
Number of extensions: 6870
Number of successful extensions: 16
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 78170964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)