Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00327
(508 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal ... 112 3e-25
AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p pro... 112 3e-25
AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-P... 112 3e-25
AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-P... 112 3e-25
BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p pro... 69 4e-12
AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-P... 30 2.1
BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p pro... 29 4.8
AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ank... 29 4.8
AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-P... 29 4.8
AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-P... 29 4.8
>X89659-1|CAA61806.1| 151|Drosophila melanogaster 40S ribosomal
protein S12 protein.
Length = 151
Score = 112 bits (269), Expect = 3e-25
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2
Query: 257 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 436
NEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+KD+L+
Sbjct: 89 NEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 148
Score = 106 bits (254), Expect = 2e-23
Identities = 59/121 (48%), Positives = 78/121 (64%), Gaps = 1/121 (0%)
Frame = +3
Query: 27 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCV 203
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+
Sbjct: 12 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCI 70
Query: 204 LAENCDEAAYKKLVQALATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSS 383
LAE+ DE YKKLV AL + R+ + K L ++ + + K+ V+
Sbjct: 71 LAESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVI 130
Query: 384 K 386
K
Sbjct: 131 K 131
>AY058531-1|AAL13760.1| 139|Drosophila melanogaster LD23808p
protein.
Length = 139
Score = 112 bits (269), Expect = 3e-25
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2
Query: 257 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 436
NEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+KD+L+
Sbjct: 77 NEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 104 bits (249), Expect = 8e-23
Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +3
Query: 30 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 206
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 207 AENCDEAAYKKLVQALATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 386
AE+ DE YKKLV AL + R+ + K L ++ + + K+ V+ K
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
>AE014296-2235|AAN11844.2| 139|Drosophila melanogaster CG11271-PC,
isoform C protein.
Length = 139
Score = 112 bits (269), Expect = 3e-25
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2
Query: 257 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 436
NEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+KD+L+
Sbjct: 77 NEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 104 bits (249), Expect = 8e-23
Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +3
Query: 30 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 206
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 207 AENCDEAAYKKLVQALATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 386
AE+ DE YKKLV AL + R+ + K L ++ + + K+ V+ K
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
>AE014296-2234|AAN11845.1| 139|Drosophila melanogaster CG11271-PB,
isoform B protein.
Length = 139
Score = 112 bits (269), Expect = 3e-25
Identities = 47/60 (78%), Positives = 57/60 (95%)
Frame = +2
Query: 257 NEHQIPLVKVDNNKKLGEWAGLCKIDKDGKARKIVGCSCVVIKDFGEETPALDVLKDYLK 436
NEHQIPL++VD++KKLGEW+GLCKIDK+GK RK+ GCS VVIKDFGEETPALDV+KD+L+
Sbjct: 77 NEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIKDFGEETPALDVVKDHLR 136
Score = 104 bits (249), Expect = 8e-23
Identities = 58/120 (48%), Positives = 77/120 (64%), Gaps = 1/120 (0%)
Frame = +3
Query: 30 MADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDKRQAVLCVL 206
MADV+V+VP+ P+L G MD+N ALQEVLK +LI GLVHG+H+A KALDKRQAVLC+L
Sbjct: 1 MADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLVHGIHQACKALDKRQAVLCIL 59
Query: 207 AENCDEAAYKKLVQALATNIRFHWSRLTTTKSLENGLVSARLTRMARQGKLSAAPVLSSK 386
AE+ DE YKKLV AL + R+ + K L ++ + + K+ V+ K
Sbjct: 60 AESFDEPNYKKLVTALCNEHQIPLIRVDSHKKLGEWSGLCKIDKEGKPRKVCGCSVVVIK 119
>BT001803-1|AAN71558.1| 127|Drosophila melanogaster RH29995p
protein.
Length = 127
Score = 68.9 bits (161), Expect = 4e-12
Identities = 34/53 (64%), Positives = 43/53 (81%), Gaps = 1/53 (1%)
Frame = +3
Query: 27 TMADVEVEVPTN-PILSGNNMDVNVALQEVLKTALIHGGLVHGLHEAAKALDK 182
TMADV+V+VP+ P+L G MD+N ALQEVLK +LI GL+HG+H+A KALDK
Sbjct: 16 TMADVDVDVPSAAPVLDGA-MDINTALQEVLKKSLIADGLIHGIHQACKALDK 67
>AE014134-756|AAN10358.4| 23015|Drosophila melanogaster CG33196-PB
protein.
Length = 23015
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/37 (29%), Positives = 21/37 (56%)
Frame = -3
Query: 338 PCQSCRDQPILQAFCCCQP*PVESDVRCQSLNKFLVC 228
P +SC +P+ + CQP P + +C+ +N+ +C
Sbjct: 14838 PYRSCVPEPVKEYVNPCQPSPCGPNSQCREVNEQAIC 14874
Score = 27.9 bits (59), Expect = 8.3
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Frame = -3
Query: 341 HPCQSCRDQPILQAFC-CCQP*PVESDVRCQSLNKFLVCGFIT 216
+P Q CR+ P L A C+P P +C+ +N VC +T
Sbjct: 10686 NPSQFCREIPRLPAPVEPCRPSPCGPYSQCREVNGHAVCSCVT 10728
>BT011112-1|AAR82779.1| 2851|Drosophila melanogaster LD31436p
protein.
Length = 2851
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 406 SVGCAQGLPQVVELILRCNANPY 474
S+ CA G VVEL+L+ NA+P+
Sbjct: 423 SLACAGGHQSVVELLLKNNADPF 445
>AF425651-1|AAL65911.1| 4001|Drosophila melanogaster multiple ankyrin
repeat singleKH domain protein protein.
Length = 4001
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 406 SVGCAQGLPQVVELILRCNANPY 474
S+ CA G VVEL+L+ NA+P+
Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009
>AE014297-3507|AAO41601.1| 4001|Drosophila melanogaster CG33106-PB,
isoform B protein.
Length = 4001
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 406 SVGCAQGLPQVVELILRCNANPY 474
S+ CA G VVEL+L+ NA+P+
Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009
>AE014297-3506|AAO41600.1| 4001|Drosophila melanogaster CG33106-PA,
isoform A protein.
Length = 4001
Score = 28.7 bits (61), Expect = 4.8
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +1
Query: 406 SVGCAQGLPQVVELILRCNANPY 474
S+ CA G VVEL+L+ NA+P+
Sbjct: 987 SLACAGGHQSVVELLLKNNADPF 1009
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,010,816
Number of Sequences: 53049
Number of extensions: 465938
Number of successful extensions: 1341
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1237
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1341
length of database: 24,988,368
effective HSP length: 80
effective length of database: 20,744,448
effective search space used: 1825511424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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