Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00320
(602 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_03_0408 - 20485027-20486598 33 0.17
03_02_0292 + 7151885-7152613 32 0.30
03_05_0211 - 22020515-22020687,22020801-22020831,22022060-220221... 31 0.53
11_06_0767 + 27121761-27123335,27123701-27123910,27124843-271249... 31 0.70
10_02_0023 + 4306350-4306908,4308429-4308814,4308917-4308991,430... 31 0.70
05_03_0318 - 12292969-12293222,12293305-12293898,12297102-122974... 31 0.70
02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050 31 0.93
10_06_0001 - 9366721-9367293 30 1.2
04_04_1076 - 30639835-30640898,30641613-30641915,30642008-306420... 29 2.8
01_01_0471 - 3467275-3467351,3467526-3467895,3468258-3468555,346... 29 2.8
07_03_0059 + 12901191-12901316,12901333-12901452,12901891-129021... 29 3.7
07_01_0922 - 7756210-7756808,7756864-7757302 29 3.7
06_03_0006 - 15306302-15306805,15307758-15307893,15308909-153090... 29 3.7
12_01_0464 + 3635551-3635836,3635984-3636246 28 5.0
08_02_0348 - 16075103-16075492,16076170-16076469 28 5.0
07_03_0601 - 19872780-19873099,19873148-19873151,19874196-198743... 28 5.0
04_04_0326 - 24407201-24407374,24407397-24407460,24408266-244086... 28 5.0
04_01_0559 - 7175828-7176195,7176262-7176973,7178028-7178201,717... 28 5.0
02_03_0093 - 15120951-15121344,15121658-15121953,15122119-151224... 28 5.0
01_05_0261 - 20135258-20135725 28 5.0
01_04_0137 + 16522157-16522601,16522658-16522712,16523655-165238... 28 5.0
01_06_1195 - 35319709-35319887,35320001-35320397 26 6.3
11_01_0528 - 4148737-4149483,4149618-4150147,4150238-4150736,415... 28 6.5
03_06_0153 - 32024787-32024892,32024997-32025079,32025159-320259... 28 6.5
01_05_0116 - 18294960-18295078,18295967-18296102,18297167-182972... 28 6.5
01_01_0051 + 389051-389623 28 6.5
08_02_1175 + 24927153-24927698,24928640-24929185 27 8.7
06_03_1362 + 29571324-29571564,29571746-29571921,29571972-295722... 27 8.7
06_03_0750 - 24140988-24141037,24141108-24141345,24142158-241422... 27 8.7
03_02_0594 - 9695616-9696042,9696646-9697260,9697410-9697717,970... 27 8.7
>06_03_0408 - 20485027-20486598
Length = 523
Score = 33.1 bits (72), Expect = 0.17
Identities = 16/43 (37%), Positives = 21/43 (48%)
Frame = -2
Query: 217 VRRDVKERVADVDSGVVVGELDEVMGVVGGRVLGPVAALRAIG 89
VR D A VDSG +GE+ +G GGR+ P +G
Sbjct: 133 VRVDAASATAWVDSGATLGEMYYAIGKAGGRIAFPAGLCPTVG 175
>03_02_0292 + 7151885-7152613
Length = 242
Score = 32.3 bits (70), Expect = 0.30
Identities = 15/36 (41%), Positives = 22/36 (61%)
Frame = +1
Query: 250 RASADWVPPVCVSRAEPPLSAPPLGENERAPRKSTV 357
+A+ + PVC+ + PP APP+GEN P +S V
Sbjct: 152 QAAGGKLTPVCL-QLFPPTQAPPIGENLPGPARSAV 186
>03_05_0211 -
22020515-22020687,22020801-22020831,22022060-22022169,
22022715-22023102,22023344-22023397,22023739-22023849,
22023956-22024015,22024618-22024694,22026155-22026188,
22026267-22027235
Length = 668
Score = 31.5 bits (68), Expect = 0.53
Identities = 18/52 (34%), Positives = 22/52 (42%)
Frame = +2
Query: 2 DRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVK 157
DR ID S+ +EE S+E D E DG+EDA H K
Sbjct: 613 DRYKIDLTPRKSAIKIMIQEELTRLSKEDDDEDEDEDGNEDAEKKKPQHQAK 664
>11_06_0767 +
27121761-27123335,27123701-27123910,27124843-27124911,
27125387-27125656,27126027-27126377,27126480-27126757,
27126887-27128330
Length = 1398
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = -2
Query: 520 EVGRSHFASPACRTPPRQSGPPPTTEGRRASSASYSFYQ 404
+ + + P PP +GPPP T +SAS +F Q
Sbjct: 41 DTNETQYERPVAAVPPLPTGPPPVTTTPMPTSASGAFSQ 79
>10_02_0023 +
4306350-4306908,4308429-4308814,4308917-4308991,
4309330-4309539,4309649-4309961,4310035-4310130,
4310220-4310357,4310436-4310536,4310645-4310712,
4310800-4310849,4311790-4311848,4312399-4312530
Length = 728
Score = 31.1 bits (67), Expect = 0.70
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Frame = +2
Query: 2 DRMSI-DQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPA 133
D M + D+G VS A+ K + E E D E G+G+E+APA
Sbjct: 38 DGMEVEDRGEVVSQEATAVKPDEAEEPEE--DPEEVGEGAEEAPA 80
>05_03_0318 -
12292969-12293222,12293305-12293898,12297102-12297415,
12297712-12297893,12297960-12298187,12298234-12298698,
12299393-12299443
Length = 695
Score = 31.1 bits (67), Expect = 0.70
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ G R+SS+ + ++ RR
Sbjct: 656 PPRSSGVPPSPSGWRSSSSLWDLGEITRR 684
>02_05_1329 - 35724567-35725255,35725626-35725682,35727667-35729050
Length = 709
Score = 30.7 bits (66), Expect = 0.93
Identities = 19/48 (39%), Positives = 26/48 (54%)
Frame = +3
Query: 435 LLPSVVGGGPDWRGGVRHAGLAK*LLPTSADSHNSTSVFSKVFNRRSS 578
L PS V GPD+ + GL LLP+ AD +STSV + R++
Sbjct: 525 LKPSNVLLGPDFESCLTDYGLVPTLLPSHADLASSTSVLYRAPETRTA 572
>10_06_0001 - 9366721-9367293
Length = 190
Score = 30.3 bits (65), Expect = 1.2
Identities = 16/67 (23%), Positives = 27/67 (40%)
Frame = +2
Query: 14 IDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGIDIRD 193
+++ E + +EE E E D + GD + + DD +S +D D +
Sbjct: 109 VEEEEEEEEEEEEEEEEEEEEEEEPVDDDDVGDNGQHSTVDDVDE-GNVSVNDGNFDSEE 167
Query: 194 PLLHVTP 214
L H P
Sbjct: 168 ILRHAEP 174
>04_04_1076 -
30639835-30640898,30641613-30641915,30642008-30642068,
30643076-30644380
Length = 910
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/48 (31%), Positives = 27/48 (56%)
Frame = -2
Query: 499 ASPACRTPPRQSGPPPTTEGRRASSASYSFYQV*RRRPSAVVRQARKK 356
A+P+CR R++ P++ GR S + + ++ R P+ RQ RK+
Sbjct: 631 AAPSCRHRSRRTDKRPSSSGRHGSGRTANKHE--RPAPATRPRQRRKR 676
>01_01_0471 -
3467275-3467351,3467526-3467895,3468258-3468555,
3468680-3469734,3469823-3470467
Length = 814
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +1
Query: 301 PLSAPPLGENERAPRKSTVSFSLDG 375
PL+ P +R PRKST +FS DG
Sbjct: 156 PLNGHPQNTRQRKPRKSTRTFSDDG 180
>07_03_0059 +
12901191-12901316,12901333-12901452,12901891-12902170,
12902348-12902895,12902943-12903122,12904331-12904846
Length = 589
Score = 28.7 bits (61), Expect = 3.7
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 499 PPRSSGAPPSPSECRSSSSRWDLGEITRR 527
>07_01_0922 - 7756210-7756808,7756864-7757302
Length = 345
Score = 28.7 bits (61), Expect = 3.7
Identities = 17/55 (30%), Positives = 23/55 (41%)
Frame = +2
Query: 92 DSSEGGDGSEDAPADDAHHLVKLSYHDSGIDIRDPLLHVTPNNTKKVYSDADIVR 256
DS DGS D DD H + H P +H T N K +SD +++
Sbjct: 167 DSEHDTDGSTDHSTDDEHPEPQPVVHSIN---SFPFMHATGKNPIKAFSDIYVLK 218
>06_03_0006 -
15306302-15306805,15307758-15307893,15308909-15309087,
15310097-15310230,15310712-15311210,15311372-15311720,
15314597-15314649
Length = 617
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -2
Query: 475 PRQSGPPPTTEGRRASSASYSFYQV 401
PR SG PP+ G R+SS+ + F ++
Sbjct: 532 PRSSGVPPSPSGWRSSSSHWEFGEI 556
>12_01_0464 + 3635551-3635836,3635984-3636246
Length = 182
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/46 (30%), Positives = 21/46 (45%)
Frame = +2
Query: 8 MSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAH 145
M +D +E +S K LE E +S GG + P++D H
Sbjct: 1 MEVDMEAEGASGELGHKRADLEKPTEEERASNGGGDAAKTPSEDHH 46
>08_02_0348 - 16075103-16075492,16076170-16076469
Length = 229
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 181 PPRSSGVPPSPSEWRSSSSRWDLGEITRR 209
>07_03_0601 -
19872780-19873099,19873148-19873151,19874196-19874357,
19874429-19874617,19874687-19875010,19875103-19875378,
19875436-19875478,19876110-19876188,19876473-19876555,
19876708-19876782,19877324-19877490,19877960-19878370
Length = 710
Score = 28.3 bits (60), Expect = 5.0
Identities = 14/41 (34%), Positives = 23/41 (56%)
Frame = +2
Query: 14 IDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPAD 136
+D GSE S S S + + ++R +S+ +GS+DA D
Sbjct: 650 MDAGSENSGSESDRDQRTASKGKKRYFNSDDEEGSKDAAKD 690
>04_04_0326 -
24407201-24407374,24407397-24407460,24408266-24408689,
24408885-24409057,24409178-24409275,24409723-24409853,
24410053-24410174,24411091-24411245,24411976-24412081,
24412328-24412419,24412499-24412620,24413444-24413544,
24413636-24413849,24414173-24414311,24415228-24415584
Length = 823
Score = 28.3 bits (60), Expect = 5.0
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = -2
Query: 256 THDIRIAVHLFGVVRRDVKERVADVDSGVVVGELDEVMGVVGGRVLGPVAALRAIG 89
THD+ H V ++E + + V E DEV V R+LG + A RA G
Sbjct: 209 THDMAWKAHYREVFDHGIREALCCLGRAKTVLEEDEVYSV--ARLLGDLVAYRASG 262
>04_01_0559 -
7175828-7176195,7176262-7176973,7178028-7178201,
7178814-7178891
Length = 443
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 373 PPRSSGVPPSPSECRSSSSRWDLGEITRR 401
>02_03_0093 -
15120951-15121344,15121658-15121953,15122119-15122419,
15123233-15123628,15123883-15124067
Length = 523
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 442 PPRSSGVPPSPSEWRSSSSRWDLGEITRR 470
>01_05_0261 - 20135258-20135725
Length = 155
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 65 PPRSSGVPPSPSEWRSSSSRWDLGEITRR 93
>01_04_0137 +
16522157-16522601,16522658-16522712,16523655-16523807,
16525750-16525944,16526096-16526618,16526712-16527103,
16527201-16527270,16527471-16527506,16527818-16527892
Length = 647
Score = 28.3 bits (60), Expect = 5.0
Identities = 12/29 (41%), Positives = 18/29 (62%)
Frame = -2
Query: 478 PPRQSGPPPTTEGRRASSASYSFYQV*RR 392
PPR SG PP+ R+SS+ + ++ RR
Sbjct: 538 PPRSSGVPPSPSEWRSSSSCWDLGEITRR 566
>01_06_1195 - 35319709-35319887,35320001-35320397
Length = 191
Score = 25.8 bits (54), Expect(2) = 6.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +3
Query: 507 LLPTSADSHNSTSVFSKVFNRRSSLVGLGVL 599
LLP + + SV VFN +S++G G++
Sbjct: 22 LLPEFSGGGHGASVSGAVFNVSTSIIGAGIM 52
Score = 20.6 bits (41), Expect(2) = 6.3
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 420 DAEEALLPSVVGGG 461
+ EE LLP GGG
Sbjct: 17 EVEEPLLPEFSGGG 30
>11_01_0528 -
4148737-4149483,4149618-4150147,4150238-4150736,
4152041-4152043
Length = 592
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/26 (50%), Positives = 16/26 (61%)
Frame = +3
Query: 525 DSHNSTSVFSKVFNRRSSLVGLGVLK 602
DSH T V S V +RSS+V L + K
Sbjct: 254 DSHGETFVHSAVREKRSSIVSLAIKK 279
>03_06_0153 -
32024787-32024892,32024997-32025079,32025159-32025978,
32026122-32026327,32026887-32026975,32027132-32027192,
32027297-32027416
Length = 494
Score = 27.9 bits (59), Expect = 6.5
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = +1
Query: 298 PPLSAPPLGENERAPRKSTVS 360
PP+ AP +GE +R P K+ +S
Sbjct: 34 PPVDAPKVGERKRPPSKNALS 54
>01_05_0116 -
18294960-18295078,18295967-18296102,18297167-18297275,
18298027-18298070,18298305-18298372,18298625-18298695,
18299068-18300005
Length = 494
Score = 27.9 bits (59), Expect = 6.5
Identities = 14/32 (43%), Positives = 18/32 (56%)
Frame = -2
Query: 460 PPPTTEGRRASSASYSFYQV*RRRPSAVVRQA 365
PPP+ E A+SA Y F + R P AV+ A
Sbjct: 112 PPPSLESDAAASAPYPFAPIPRCLPHAVLDAA 143
>01_01_0051 + 389051-389623
Length = 190
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/46 (28%), Positives = 20/46 (43%)
Frame = +2
Query: 2 DRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADD 139
DR G++ SSS+ S +S + SS S + +DD
Sbjct: 90 DRQRSSHGTDTSSSSESSSSSSSSSSESSSSSSSSSSESSSSSSDD 135
>08_02_1175 + 24927153-24927698,24928640-24929185
Length = 363
Score = 27.5 bits (58), Expect = 8.7
Identities = 12/37 (32%), Positives = 18/37 (48%)
Frame = +1
Query: 442 PLSWVEGLTGEVASGTQGSQSDFYPLRPTVTTQQASF 552
P W E L +V GT G+ S+F+ R + +F
Sbjct: 218 PEGWKERLVSKVEKGTNGTDSEFFNPRKRSEREYLTF 254
>06_03_1362 +
29571324-29571564,29571746-29571921,29571972-29572251,
29572949-29573085,29573174-29573401
Length = 353
Score = 27.5 bits (58), Expect = 8.7
Identities = 13/41 (31%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 26 SEVSSSASQCKEE--SLEASRERADSSEGGDGSEDAPADDA 142
++ S + ++E S +A + A +EGG G +DA +DA
Sbjct: 76 ADAKSGLERAEQEPPSADAGKSDAAQAEGGGGDDDAEQEDA 116
>06_03_0750 -
24140988-24141037,24141108-24141345,24142158-24142232,
24142345-24142413,24142550-24142581,24143503-24143583,
24143791-24143851,24144135-24144275,24144372-24144563
Length = 312
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/25 (44%), Positives = 16/25 (64%)
Frame = -2
Query: 508 SHFASPACRTPPRQSGPPPTTEGRR 434
S FASP+ +PP PPP++ +R
Sbjct: 33 SAFASPSPPSPPPPPPPPPSSSSKR 57
>03_02_0594 -
9695616-9696042,9696646-9697260,9697410-9697717,
9700145-9700235,9700698-9700759,9701256-9702962,
9703789-9703870,9703972-9704057,9704855-9704968,
9705113-9705163,9705261-9705358,9707084-9707546
Length = 1367
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = +1
Query: 520 RPTVTTQQASFRKYSTGAVRWWVW 591
RPT TT A+ +T A RW+ W
Sbjct: 52 RPTTTTTAAATATSATAACRWFRW 75
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,241,160
Number of Sequences: 37544
Number of extensions: 261029
Number of successful extensions: 1845
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1839
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1431112012
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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