Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00320
(602 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subun... 34 0.44
U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit o... 34 0.44
BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein... 34 0.44
AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein... 34 0.44
X86693-1|CAA60386.1| 664|Homo sapiens Hevin-like protein protein. 32 1.8
AB075820-1|BAB85526.1| 821|Homo sapiens KIAA1940 protein protein. 31 3.1
BC031301-1|AAH31301.1| 583|Homo sapiens leucine rich repeat con... 31 4.1
AL365330-3|CAI42528.1| 583|Homo sapiens leucine rich repeat con... 31 4.1
AL109917-9|CAI95657.1| 124|Homo sapiens transmembrane protein 5... 31 4.1
AB033011-1|BAA86499.1| 403|Homo sapiens KIAA1185 protein protein. 31 4.1
BC028212-1|AAH28212.1| 494|Homo sapiens PIK3R5 protein protein. 30 5.4
AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP respons... 30 5.4
AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B p... 30 5.4
AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A pr... 30 5.4
AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein pr... 30 5.4
AF128881-1|AAD33397.1| 880|Homo sapiens PI3 kinase regulatory s... 30 5.4
AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-... 30 5.4
AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein. 30 5.4
AB028925-1|BAB82464.1| 880|Homo sapiens FOAP-2 protein. 30 5.4
BC151243-1|AAI51244.1| 1565|Homo sapiens desmuslin protein. 29 9.5
BC063842-1|AAH63842.1| 799|Homo sapiens thrombospondin, type I,... 29 9.5
AL359513-2|CAM14602.1| 799|Homo sapiens thrombospondin, type I,... 29 9.5
AL359513-1|CAH71657.1| 852|Homo sapiens thrombospondin, type I,... 29 9.5
AF359284-1|AAK57487.1| 1253|Homo sapiens desmuslin protein. 29 9.5
AB044385-1|BAA96553.1| 852|Homo sapiens transmembrane molecule ... 29 9.5
AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein. 29 9.5
>U91931-1|AAD03778.1| 1093|Homo sapiens AP-3 complex beta3A subunit
protein.
Length = 1093
Score = 33.9 bits (74), Expect = 0.44
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 17 DQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGID 184
++ + S S+S + ES S E+ +S E GD +ED+ D + S +SG++
Sbjct: 680 EEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLE 735
>U81504-1|AAB61638.1| 1094|Homo sapiens beta-3A-adaptin subunit of
the AP-3 complex protein.
Length = 1094
Score = 33.9 bits (74), Expect = 0.44
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 17 DQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGID 184
++ + S S+S + ES S E+ +S E GD +ED+ D + S +SG++
Sbjct: 680 EEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLE 735
>BC038444-1|AAH38444.1| 1094|Homo sapiens adaptor-related protein
complex 3, beta 1 subunit protein.
Length = 1094
Score = 33.9 bits (74), Expect = 0.44
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 17 DQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGID 184
++ + S S+S + ES S E+ +S E GD +ED+ D + S +SG++
Sbjct: 680 EEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLE 735
>AY623424-1|AAT49048.1| 800|Homo sapiens adaptor-related protein
complex 3 beta 1 subunit protein.
Length = 800
Score = 33.9 bits (74), Expect = 0.44
Identities = 17/56 (30%), Positives = 30/56 (53%)
Frame = +2
Query: 17 DQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSGID 184
++ + S S+S + ES S E+ +S E GD +ED+ D + S +SG++
Sbjct: 680 EEEEDSSDSSSDSESESGSESGEQGESGEEGDSNEDSSEDSSSEQDSESGRESGLE 735
>X86693-1|CAA60386.1| 664|Homo sapiens Hevin-like protein protein.
Length = 664
Score = 31.9 bits (69), Expect = 1.8
Identities = 20/57 (35%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Frame = +2
Query: 38 SSASQCKEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSY--HDSGIDIRDPLL 202
SS + KEES E S E+ SS G +D D H V L Y + +DI++ ++
Sbjct: 71 SSVLKSKEESHEQSAEQGKSSSQELGLKDQEDSDGHLSVNLEYAPTEGTLDIKEDMI 127
>AB075820-1|BAB85526.1| 821|Homo sapiens KIAA1940 protein protein.
Length = 821
Score = 31.1 bits (67), Expect = 3.1
Identities = 18/43 (41%), Positives = 20/43 (46%)
Frame = -2
Query: 541 VEL*LSAEVGRSHFASPACRTPPRQSGPPPTTEGRRASSASYS 413
+E+ L R AS AC TPP GP P AS AS S
Sbjct: 96 IEIPLGELFARKSVASSACSTPPPGPGPGPCPGPASASPASPS 138
>BC031301-1|AAH31301.1| 583|Homo sapiens leucine rich repeat
containing 47 protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKL 160
KEES RER EGGDG E D L+++
Sbjct: 277 KEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRV 311
>AL365330-3|CAI42528.1| 583|Homo sapiens leucine rich repeat
containing 47 protein.
Length = 583
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKL 160
KEES RER EGGDG E D L+++
Sbjct: 277 KEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRV 311
>AL109917-9|CAI95657.1| 124|Homo sapiens transmembrane protein 52
protein.
Length = 124
Score = 30.7 bits (66), Expect = 4.1
Identities = 19/55 (34%), Positives = 23/55 (41%)
Frame = -3
Query: 585 PPTNCAC*ILSKRRLLSCDCRPKWVEVTLRALRAGRHLASQALHPRQRVGEPLQH 421
PP +C C S R SC CR +WV ++R R L PR P H
Sbjct: 5 PPADCGCCCRSCRSCRSCRCR-RWVGRRSLSVRPPR--GGSLLGPRPSRAHPCPH 56
>AB033011-1|BAA86499.1| 403|Homo sapiens KIAA1185 protein protein.
Length = 403
Score = 30.7 bits (66), Expect = 4.1
Identities = 15/35 (42%), Positives = 18/35 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKL 160
KEES RER EGGDG E D L+++
Sbjct: 97 KEESRRKRRERKQRREGGDGEEQDVGDAGRLLLRV 131
>BC028212-1|AAH28212.1| 494|Homo sapiens PIK3R5 protein protein.
Length = 494
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 517 VGRSHFASPACRTPPRQSGP-PPTTEGRRAS 428
V RSH SP PPR P PPT R AS
Sbjct: 175 VKRSHGTSPGACPPPRSQTPSPPTDSPRHAS 205
>AL163279-2|CAB90452.1| 2295|Homo sapiens homolog to cAMP response
element binding and betadogene protein.
Length = 2295
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1564 TSLSSSASSSSEESKESSRARESSSRSG 1591
>AJ292466-1|CAC44372.1| 2269|Homo sapiens WDR9 protein, form B
protein.
Length = 2269
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSG 1565
>AJ292465-1|CAC44371.1| 2320|Homo sapiens WDR9 protein, form A
protein.
Length = 2320
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSG 1565
>AJ238214-1|CAC37033.2| 2269|Homo sapiens hypothetical protein
protein.
Length = 2269
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSG 1565
>AF128881-1|AAD33397.1| 880|Homo sapiens PI3 kinase regulatory
subunit P101 protein.
Length = 880
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 517 VGRSHFASPACRTPPRQSGP-PPTTEGRRAS 428
V RSH SP PPR P PPT R AS
Sbjct: 561 VKRSHGTSPGACPPPRSQTPSPPTDSPRHAS 591
>AB080587-1|BAD74072.1| 2199|Homo sapiens WD repeat protein WDR9-form2
protein.
Length = 2199
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSG 1565
>AB080586-1|BAD74071.1| 2269|Homo sapiens WD repeat protein protein.
Length = 2269
Score = 30.3 bits (65), Expect = 5.4
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +2
Query: 26 SEVSSSASQCKEESLEASRERADSSEGG 109
+ +SSSAS EES E+SR R SS G
Sbjct: 1538 TSLSSSASSSSEESKESSRARESSSRSG 1565
>AB028925-1|BAB82464.1| 880|Homo sapiens FOAP-2 protein.
Length = 880
Score = 30.3 bits (65), Expect = 5.4
Identities = 16/31 (51%), Positives = 16/31 (51%), Gaps = 1/31 (3%)
Frame = -2
Query: 517 VGRSHFASPACRTPPRQSGP-PPTTEGRRAS 428
V RSH SP PPR P PPT R AS
Sbjct: 561 VKRSHGTSPGACPPPRSQTPSPPTDSPRHAS 591
>BC151243-1|AAI51244.1| 1565|Homo sapiens desmuslin protein.
Length = 1565
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 DRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPA 133
+ +S D+ SE+ + ESL R A S +G +APA
Sbjct: 1017 EELSKDEASEMEKAVESVVRESLSRQRSPAPGSPDEEGGAEAPA 1060
>BC063842-1|AAH63842.1| 799|Homo sapiens thrombospondin, type I,
domain containing 1 protein.
Length = 799
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSG 178
+E E S +R S+GGDG +P D + L+Y SG
Sbjct: 412 EENICELSEQRGSFSDGGDGPTGSPGDTG---IPLTYRRSG 449
>AL359513-2|CAM14602.1| 799|Homo sapiens thrombospondin, type I,
domain containing 1 protein.
Length = 799
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSG 178
+E E S +R S+GGDG +P D + L+Y SG
Sbjct: 412 EENICELSEQRGSFSDGGDGPTGSPGDTG---IPLTYRRSG 449
>AL359513-1|CAH71657.1| 852|Homo sapiens thrombospondin, type I,
domain containing 1 protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSG 178
+E E S +R S+GGDG +P D + L+Y SG
Sbjct: 465 EENICELSEQRGSFSDGGDGPTGSPGDTG---IPLTYRRSG 502
>AF359284-1|AAK57487.1| 1253|Homo sapiens desmuslin protein.
Length = 1253
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 DRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPA 133
+ +S D+ SE+ + ESL R A S +G +APA
Sbjct: 1017 EELSKDEASEMEKAVESVVRESLSRQRSPAPGSPDEEGGAEAPA 1060
>AB044385-1|BAA96553.1| 852|Homo sapiens transmembrane molecule
with thrombospondin module protein.
Length = 852
Score = 29.5 bits (63), Expect = 9.5
Identities = 15/41 (36%), Positives = 21/41 (51%)
Frame = +2
Query: 56 KEESLEASRERADSSEGGDGSEDAPADDAHHLVKLSYHDSG 178
+E E S +R S+GGDG +P D + L+Y SG
Sbjct: 465 EENICELSEQRGSFSDGGDGPTGSPGDTG---IPLTYRRSG 502
>AB002351-1|BAA20810.2| 1614|Homo sapiens KIAA0353 protein.
Length = 1614
Score = 29.5 bits (63), Expect = 9.5
Identities = 14/44 (31%), Positives = 21/44 (47%)
Frame = +2
Query: 2 DRMSIDQGSEVSSSASQCKEESLEASRERADSSEGGDGSEDAPA 133
+ +S D+ SE+ + ESL R A S +G +APA
Sbjct: 1066 EELSKDEASEMEKAVESVVRESLSRQRSPAPGSPDEEGGAEAPA 1109
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 72,412,348
Number of Sequences: 237096
Number of extensions: 1237003
Number of successful extensions: 7249
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 6432
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7204
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6354183230
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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