Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00318
         (776 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF032900-1|AAC69451.1|  179|Homo sapiens timing protein CLK-1 pr...    31   3.5  
BC043272-1|AAH43272.1|  194|Homo sapiens COQ7 protein protein.         30   8.1  
BC003185-1|AAH03185.1|  217|Homo sapiens coenzyme Q7 homolog, ub...    30   8.1  
AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens ...    30   8.1  
AK024291-1|BAB14876.1|  217|Homo sapiens protein ( Homo sapiens ...    30   8.1  
AF374413-1|AAM21346.1|  179|Homo sapiens placental protein KG-20...    30   8.1  
AF098948-1|AAD43648.1|  217|Homo sapiens COQ7 protein protein.         30   8.1  

>AF032900-1|AAC69451.1|  179|Homo sapiens timing protein CLK-1
           protein.
          Length = 179

 Score = 31.5 bits (68), Expect = 3.5
 Identities = 16/40 (40%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +IR
Sbjct: 97  MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIR 134


>BC043272-1|AAH43272.1|  194|Homo sapiens COQ7 protein protein.
          Length = 194

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +I+
Sbjct: 112 MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIK 149


>BC003185-1|AAH03185.1|  217|Homo sapiens coenzyme Q7 homolog,
           ubiquinone (yeast) protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +I+
Sbjct: 135 MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIK 172


>AK126213-1|BAC86488.1|  262|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44225 fis, clone THYMU3006168. ).
          Length = 262

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 12/46 (26%), Positives = 22/46 (47%)
 Frame = +1

Query: 415 YTKPPYALSVFSYAFYRVSRK*CVHTYTCELWHVYSKFKLTIGMYI 552
           YT+    + +F Y +  +    C+H YTC   H+Y    + +  Y+
Sbjct: 156 YTRICIHICIFIYTYVCMCVCSCIHVYTCVYIHIYIGMHICVYSYM 201


>AK024291-1|BAB14876.1|  217|Homo sapiens protein ( Homo sapiens
           cDNA FLJ14229 fis, clone NT2RP3004155, highly similar to
           Homo sapiens COQ7 protein mRNA. ).
          Length = 217

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +I+
Sbjct: 135 MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIK 172


>AF374413-1|AAM21346.1|  179|Homo sapiens placental protein KG-20
           protein.
          Length = 179

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +I+
Sbjct: 97  MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIK 134


>AF098948-1|AAD43648.1|  217|Homo sapiens COQ7 protein protein.
          Length = 217

 Score = 30.3 bits (65), Expect = 8.1
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = +3

Query: 507 MACIFQVQTNYRHVYSNYNNVPA*LEQDPECSNELLDMIR 626
           MAC   V+ +  H Y+N   +   +E+DPE   ELL +I+
Sbjct: 135 MACTVAVEESIAHHYNN--QIRTLMEEDPEKYEELLQLIK 172


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,965,938
Number of Sequences: 237096
Number of extensions: 2168023
Number of successful extensions: 3588
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3587
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9423020542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)