Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00317
         (782 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1; ...    35   2.6  
UniRef50_A5K959 Cluster: Putative uncharacterized protein; n=1; ...    34   4.6  

>UniRef50_Q4UAK5 Cluster: Putative uncharacterized protein; n=1;
           Theileria annulata|Rep: Putative uncharacterized protein
           - Theileria annulata
          Length = 1166

 Score = 34.7 bits (76), Expect = 2.6
 Identities = 24/67 (35%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
 Frame = -2

Query: 256 IKLSNNVRLKKKTFFICFMKTEILNEQFFHKQN*QFDIINMNVKKHPIY-LIFKLLYIFV 80
           I  +NN  + + T FI F+ T       F+  N  F+ IN+ +K   I  L+  LL IF+
Sbjct: 313 ILFTNNNFITRNTNFINFINTNTN----FNNTNTNFNFINLKIKLFIIIILLIILLIIFI 368

Query: 79  LFLLHVF 59
           LFL + F
Sbjct: 369 LFLYYFF 375


>UniRef50_A5K959 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium vivax|Rep: Putative uncharacterized protein -
           Plasmodium vivax
          Length = 1238

 Score = 33.9 bits (74), Expect = 4.6
 Identities = 30/111 (27%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
 Frame = -2

Query: 331 NLVHVRALLLSVRELILHCVLEKP-----KIKLSNN-VRLKKKTFFICFM------KTEI 188
           N ++     L +  LIL C++ +       I +SNN +R K+K FF CF+       T++
Sbjct: 583 NKINAEYYHLKLNILILSCIIIQIFNSCILILISNNFIRKKEKIFFFCFLYSLLESVTDV 642

Query: 187 LNEQFFHKQN*QFDIINMNVKKHPIY-------LIFKLLYIFVLFLLHVFI 56
           ++E  F       +I       + IY       +I  L  IF+ F+ H+F+
Sbjct: 643 ISENIFFLCGKFTNIYKKEFSINAIYVIQVISKMILSLSTIFIYFVYHIFV 693


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,932,528
Number of Sequences: 1657284
Number of extensions: 12627604
Number of successful extensions: 26124
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 24987
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26113
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 66262109095
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)