Bombyx BLAST Result against nematostella

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00317
         (782 letters)

Database: nematostella 
           59,808 sequences; 16,821,457 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

SB_16660| Best HMM Match : TIP49 (HMM E-Value=1.1e-21)                 31   1.1  
SB_18948| Best HMM Match : ANF_receptor (HMM E-Value=7.2e-17)          29   5.6  

>SB_16660| Best HMM Match : TIP49 (HMM E-Value=1.1e-21)
          Length = 150

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/20 (60%), Positives = 17/20 (85%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAK+L + +DKYM+
Sbjct: 131 FYDAKSSAKLLAEQADKYMK 150


>SB_18948| Best HMM Match : ANF_receptor (HMM E-Value=7.2e-17)
          Length = 335

 Score = 28.7 bits (61), Expect = 5.6
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = -2

Query: 652 KYHMCFMNNTARGIEKI 602
           +YH  F+NN+A GIEK+
Sbjct: 298 RYHHTFVNNSAEGIEKV 314


  Database: nematostella
    Posted date:  Oct 22, 2007  1:22 PM
  Number of letters in database: 16,821,457
  Number of sequences in database:  59,808
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,969,899
Number of Sequences: 59808
Number of extensions: 401528
Number of successful extensions: 780
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 730
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 780
length of database: 16,821,457
effective HSP length: 81
effective length of database: 11,977,009
effective search space used: 2143884611
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)