Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00316
         (575 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    24   1.1  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   1.4  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   5.7  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.9  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.9  
AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory recept...    21   9.9  
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   9.9  

>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 14/52 (26%), Positives = 19/52 (36%)
 Frame = +2

Query: 200 GSLPPGLQGSSLGKDFSPAIPRPGSVPRTTATFNYDSGSQQSGHHHNVACNS 355
           GS+ P    S    +   A P PG VP  ++  +            N  CNS
Sbjct: 35  GSMTPNSAASPAPPEEEAASPTPGDVPTPSSPRSISEDPLNCRDLPNSRCNS 86


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 10/29 (34%), Positives = 15/29 (51%)
 Frame = +2

Query: 209 PPGLQGSSLGKDFSPAIPRPGSVPRTTAT 295
           PP L  +++GK F P    P   P  ++T
Sbjct: 52  PPPLADAAVGKGFHPWKKSPQGAPSPSST 80


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 5.7
 Identities = 8/16 (50%), Positives = 11/16 (68%)
 Frame = -1

Query: 146 LTLIHNTLVMIAKRKN 99
           + L+H TLV +AK  N
Sbjct: 81  MVLLHKTLVRVAKSLN 96


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = +3

Query: 330  TTTMSPAIQQCIRSCPVTAEYNPVCGTD 413
            ++TM+P+    +   PVT   +   GTD
Sbjct: 2289 SSTMAPSTTPMVPDKPVTTTTSRPIGTD 2316


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 471 VSVLRSLPCPTATKLLPAK 527
           + V R++P PT  K+ PA+
Sbjct: 200 MQVKRNVPKPTVPKIPPAE 218


>AM292343-1|CAL23155.2|  301|Tribolium castaneum gustatory receptor
           candidate 22 protein.
          Length = 301

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 7/18 (38%), Positives = 12/18 (66%)
 Frame = -3

Query: 450 HTSTFQGYCKLYYQCHKL 397
           HTS +  +  ++YQ HK+
Sbjct: 174 HTSIYIIFFDMFYQHHKI 191


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 20.6 bits (41), Expect = 9.9
 Identities = 8/19 (42%), Positives = 13/19 (68%)
 Frame = +3

Query: 471 VSVLRSLPCPTATKLLPAK 527
           + V R++P PT  K+ PA+
Sbjct: 200 MQVKRNVPKPTVPKIPPAE 218


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 124,739
Number of Sequences: 336
Number of extensions: 2643
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 14308417
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)