Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00316
         (575 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.6  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    22   3.8  
AF388659-3|AAK71993.1|  548|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    22   5.0  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.6  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   6.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.6  

>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.6
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = -1

Query: 428 IVSYIISATNWIVLSGYWAATNALLNC 348
           + +Y+I   NW +    W   + L+NC
Sbjct: 258 VPTYLIKWKNWDLKYNTWEPISNLINC 284


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 14/46 (30%), Positives = 18/46 (39%)
 Frame = +2

Query: 203 SLPPGLQGSSLGKDFSPAIPRPGSVPRTTATFNYDSGSQQSGHHHN 340
           S P  L G     D   A  + G  PR         G + SG+H+N
Sbjct: 156 SQPGSLNGYG-SSDGCDARKKKGPTPRQQEELCLVCGDRASGYHYN 200


>AF388659-3|AAK71993.1|  548|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform C protein.
          Length = 548

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 242 DFSPAIPRPGSVPRTTATFNYDSGSQQSGH 331
           DF+  +P P  +PR      +  G+ + G+
Sbjct: 499 DFAKTLPLPQHLPRIHHDAEWKVGNHEDGY 528


>AF388659-2|AAK71994.1|  463|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform B protein.
          Length = 463

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 242 DFSPAIPRPGSVPRTTATFNYDSGSQQSGH 331
           DF+  +P P  +PR      +  G+ + G+
Sbjct: 414 DFAKTLPLPQHLPRIHHDAEWKVGNHEDGY 443


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = +2

Query: 242 DFSPAIPRPGSVPRTTATFNYDSGSQQSGH 331
           DF+  +P P  +PR      +  G+ + G+
Sbjct: 733 DFAKTLPLPQHLPRIHHDAEWKVGNHEDGY 762


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 426 CKLYYQCHKLDCTQRLL 376
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 426 CKLYYQCHKLDCTQRLL 376
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = +2

Query: 326  GHHHNVACNSTMH 364
            G+HHNV  + T+H
Sbjct: 1678 GYHHNVNKHCTIH 1690


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/17 (47%), Positives = 10/17 (58%)
 Frame = -3

Query: 426 CKLYYQCHKLDCTQRLL 376
           CKL+  C  L CT  +L
Sbjct: 109 CKLWLTCDVLCCTASIL 125


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 145,625
Number of Sequences: 438
Number of extensions: 2943
Number of successful extensions: 10
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)