Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00314
(738 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identic... 42 3e-04
At1g69730.1 68414.m08024 protein kinase family protein contains ... 38 0.007
At1g21240.1 68414.m02654 wall-associated kinase, putative simila... 38 0.007
At1g16110.1 68414.m01931 wall-associated kinase, putative contai... 37 0.016
At1g79680.1 68414.m09293 wall-associated kinase, putative simila... 36 0.028
At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identic... 35 0.065
At1g16260.1 68414.m01947 protein kinase family protein contains ... 35 0.065
At5g66790.1 68418.m08420 protein kinase family protein contains ... 34 0.11
At1g16160.1 68414.m01936 protein kinase family protein contains ... 33 0.15
At1g16140.1 68414.m01934 wall-associated kinase, putative contai... 33 0.20
At5g42090.1 68418.m05124 expressed protein 33 0.26
At1g27080.1 68414.m03301 proton-dependent oligopeptide transport... 32 0.35
At1g21230.1 68414.m02653 wall-associated kinase, putative simila... 32 0.35
At1g19390.1 68414.m02412 wall-associated kinase, putative simila... 32 0.35
At4g31100.1 68417.m04414 wall-associated kinase, putative 32 0.46
At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nea... 32 0.46
At1g21210.1 68414.m02651 wall-associated kinase 4 32 0.46
At4g20110.1 68417.m02943 vacuolar sorting receptor, putative sim... 31 1.1
At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical... 30 1.8
At2g14720.2 68415.m01657 vacuolar sorting receptor, putative ide... 30 1.8
At2g14720.1 68415.m01656 vacuolar sorting receptor, putative ide... 30 1.8
At1g61360.1 68414.m06915 S-locus lectin protein kinase family pr... 30 1.8
At2g30290.1 68415.m03687 vacuolar sorting receptor, putative sim... 29 2.4
At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nea... 29 2.4
At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nea... 29 2.4
At1g30900.1 68414.m03780 vacuolar sorting receptor, putative sim... 29 2.4
At2g34940.1 68415.m04289 vacuolar sorting receptor, putative sim... 29 4.3
At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family... 28 5.6
At1g18860.1 68414.m02348 WRKY family transcription factor contai... 28 5.6
At1g16120.1 68414.m01932 wall-associated kinase, putative contai... 28 7.4
At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein c... 28 7.4
At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containi... 27 9.8
At4g11900.1 68417.m01893 S-locus lectin protein kinase family pr... 27 9.8
At2g19130.1 68415.m02233 S-locus lectin protein kinase family pr... 27 9.8
At1g47320.1 68414.m05239 expressed protein similar to putative n... 27 9.8
>At1g21250.1 68414.m02656 wall-associated kinase 1 (WAK1) identical
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
pathogen infection (PMID:10380805)
Length = 735
Score = 42.3 bits (95), Expect = 3e-04
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Frame = +1
Query: 517 TNSTCGPNAECF--VQKNQPLCRCRVGFEGDAYLGCNAIECRSNGDCPRDKQCKAHRCIN 690
+ S CG N+ C +N +CRC GF+G+ YL C+ +C H C +
Sbjct: 243 STSICGGNSTCLDSTPRNGYICRCNEGFDGNPYLSAG---CQDVNECTTSSTIHRHNCSD 299
Query: 691 P 693
P
Sbjct: 300 P 300
Score = 36.3 bits (80), Expect = 0.021
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Frame = +2
Query: 350 GDNADCFVKDHRP--ICSCRNGYEGDPYRTCRVVGCRTNSECDTREACINGNC 502
G N+ C R IC C G++G+PY + GC+ +EC T NC
Sbjct: 248 GGNSTCLDSTPRNGYICRCNEGFDGNPYLS---AGCQDVNECTTSSTIHRHNC 297
Score = 31.5 bits (68), Expect = 0.60
Identities = 15/26 (57%), Positives = 15/26 (57%)
Frame = +3
Query: 150 CKGNSRCSVSDSIPFRTLICRCPEGF 227
C GNS C DS P ICRC EGF
Sbjct: 247 CGGNSTCL--DSTPRNGYICRCNEGF 270
>At1g69730.1 68414.m08024 protein kinase family protein contains
Pfam profile: PF00069 Eukaryotic protein kinase domain
Length = 792
Score = 37.9 bits (84), Expect = 0.007
Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSECDTREA---CINGNCINL 511
CSC G++G+PY R+ GC+ +EC E C C+NL
Sbjct: 320 CSCTRGFQGNPY---RLGGCKDINECKEEEGMTYCGTNKCVNL 359
>At1g21240.1 68414.m02654 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 741
Score = 37.9 bits (84), Expect = 0.007
Identities = 21/57 (36%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Frame = +2
Query: 350 GDNADCFVKDHRP--ICSCRNGYEGDPYRTCRVVGCRTNSEC--DTREACINGNCIN 508
G N+ C+ R IC C GY+G+PYR+ GC+ EC DT C N
Sbjct: 259 GKNSSCYNSTTRNGYICKCNEGYDGNPYRS---EGCKDIDECISDTHNCSDPKTCRN 312
Score = 30.3 bits (65), Expect = 1.4
Identities = 20/77 (25%), Positives = 31/77 (40%), Gaps = 3/77 (3%)
Frame = +3
Query: 126 EACSELKPCKGNSR-CSVSDSIPFRT--LICRCPEGFVPSEDGSCKRPIYHPLVALRIMT 296
E C ++ C ++ CS + R C+CP G+ + SC RP Y ++
Sbjct: 289 EGCKDIDECISDTHNCSDPKTCRNRDGGFDCKCPSGYDLNSSMSCTRPEYKRTRIFLVII 348
Query: 297 AQTKSLVLTEIAEIHVT 347
L+L I H T
Sbjct: 349 IGVLVLLLAAICIQHAT 365
>At1g16110.1 68414.m01931 wall-associated kinase, putative contains
similarity to wall-associated kinase 2 GI:4826399 from
[Arabidopsis thaliana]
Length = 642
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/41 (39%), Positives = 20/41 (48%)
Frame = +2
Query: 389 ICSCRNGYEGDPYRTCRVVGCRTNSECDTREACINGNCINL 511
IC C GY G+PY GC EC+ C G C+N+
Sbjct: 303 ICYCNYGYTGNPYLR---HGCIDIDECEGHHNCGEGTCVNM 340
>At1g79680.1 68414.m09293 wall-associated kinase, putative similar
to wall-associated kinase 2 GI:4826399 from [Arabidopsis
thaliana]
Length = 769
Score = 35.9 bits (79), Expect = 0.028
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 5/46 (10%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVG-CRTNSEC----DTREACINGNCINLV 514
CSC +G+EG+PY + G C+ +EC D C G C+NL+
Sbjct: 305 CSCASGFEGNPY----IPGECKDINECVRGIDGNPVCTAGKCVNLL 346
Score = 29.9 bits (64), Expect = 1.8
Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Frame = +1
Query: 574 CRCRVGFEGDAYLGCNAIECRSNGDCPR----DKQCKAHRCIN 690
C C GFEG+ Y+ EC+ +C R + C A +C+N
Sbjct: 305 CSCASGFEGNPYI---PGECKDINECVRGIDGNPVCTAGKCVN 344
>At1g21270.1 68414.m02658 wall-associated kinase 2 (WAK2) identical
to wall-associated kinase 2 [Arabidopsis thaliana]
GI:4826399; induced by salicylic acid or INA
(PMID:10380805)
Length = 732
Score = 34.7 bits (76), Expect = 0.065
Identities = 23/65 (35%), Positives = 28/65 (43%), Gaps = 6/65 (9%)
Frame = +1
Query: 496 KLYKSCLTNSTCGPNAECFVQKNQP--LCRCRVGFEGDAYL--GCNAI-EC-RSNGDCPR 657
K K CG N+ CF C+C GFEG+ YL GC I EC S +C
Sbjct: 232 KTCKQVEYRGVCGGNSTCFDSTGGTGYNCKCLEGFEGNPYLPNGCQDINECISSRHNCSE 291
Query: 658 DKQCK 672
C+
Sbjct: 292 HSTCE 296
Score = 28.7 bits (61), Expect = 4.3
Identities = 18/63 (28%), Positives = 26/63 (41%), Gaps = 12/63 (19%)
Frame = +2
Query: 350 GDNADCFVKDHRP--ICSCRNGYEGDPY--RTCRVV--------GCRTNSECDTREACIN 493
G N+ CF C C G+EG+PY C+ + C +S C+ + N
Sbjct: 244 GGNSTCFDSTGGTGYNCKCLEGFEGNPYLPNGCQDINECISSRHNCSEHSTCENTKGSFN 303
Query: 494 GNC 502
NC
Sbjct: 304 CNC 306
>At1g16260.1 68414.m01947 protein kinase family protein contains
Pfam domain, PF00069: Protein kinase domain
Length = 720
Score = 34.7 bits (76), Expect = 0.065
Identities = 18/43 (41%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSEC-DTR-EACINGNCINLV 514
CSC NGYEG+PY GC+ EC D C C+N++
Sbjct: 266 CSCHNGYEGNPYIP---GGCQDIDECRDPHLNKCGKRKCVNVL 305
Score = 34.3 bits (75), Expect = 0.086
Identities = 21/70 (30%), Positives = 33/70 (47%), Gaps = 3/70 (4%)
Frame = +1
Query: 490 KWKLYKSCLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYL--GCNAI-ECRSNGDCPRD 660
+W+L S +T+ F + + C C G+EG+ Y+ GC I ECR P
Sbjct: 239 EWRLDLSYMTSKRVLCKGNTFFEDSYQ-CSCHNGYEGNPYIPGGCQDIDECRD----PHL 293
Query: 661 KQCKAHRCIN 690
+C +C+N
Sbjct: 294 NKCGKRKCVN 303
>At5g66790.1 68418.m08420 protein kinase family protein contains
protein kinase domain, Pfam:PF00069
Length = 622
Score = 33.9 bits (74), Expect = 0.11
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 8/59 (13%)
Frame = +1
Query: 493 WKLYKSCLTNSTCGPNAECFVQKNQP-----LCRCRVGFEGDAYL---GCNAIECRSNG 645
W L SC +N+TC NA+C K C CR GF G A+ GC+ + + G
Sbjct: 187 WWLKGSC-SNTTCSENADCAKVKLDDGGLGHRCTCREGFSGKAFTVPGGCHRLVYKRKG 244
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 33.5 bits (73), Expect = 0.15
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSECDTREACINGNCINL 511
C C G+ G+PY GC N +C C G C+N+
Sbjct: 280 CYCSLGFTGNPYLRG---GCIDNDDCKGPNICEEGTCVNV 316
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +1
Query: 508 SCLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYLGCNAIECRSNGDCPRDKQCKAHRCI 687
S L+ +C F + + C C +GF G+ YL C N DC C+ C+
Sbjct: 258 SYLSGDSCLCEYGYFSEMSYRNCYCSLGFTGNPYLRGG---CIDNDDCKGPNICEEGTCV 314
Query: 688 N 690
N
Sbjct: 315 N 315
>At1g16140.1 68414.m01934 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 690
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSECDTREACINGNCINL 511
C C +GY G+PY GC EC+ C C+N+
Sbjct: 272 CYCGSGYRGNPYIR---GGCIDIDECEVPNKCGEDTCVNM 308
>At5g42090.1 68418.m05124 expressed protein
Length = 439
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Frame = -1
Query: 327 FLLTQDSWS--VQSLSEEQPRGGKLAACSYHLQKVQSLLGNDKSEFGTVY 184
FL T+D+W +Q L EE+ + H+ +L G DKS F TV+
Sbjct: 75 FLCTRDAWVHVIQQLEEEEITCALQSDLVKHVFTFNNLKGGDKSRFSTVF 124
>At1g27080.1 68414.m03301 proton-dependent oligopeptide transport
(POT) family protein similar to nitrate transporter
NRT1-5 [Glycine max] GI:11933414; contains Pfam profile
PF00854: POT family
Length = 525
Score = 32.3 bits (70), Expect = 0.35
Identities = 13/33 (39%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Frame = -3
Query: 382 MIFNKTIRV-ITTVTWISAISVNTRLLVCAVII 287
+IF+ T+ V + TV+W+ S+ T L+ CAV++
Sbjct: 137 LIFSHTVVVYLQTVSWVIGFSIPTSLMACAVVL 169
>At1g21230.1 68414.m02653 wall-associated kinase, putative similar
to wall-associated kinase 1 [Arabidopsis thaliana]
GI:3549626; expressed in leaves and stems & induced by
salicylic acid or INA (PMID:10380805)
Length = 733
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/45 (35%), Positives = 24/45 (53%), Gaps = 2/45 (4%)
Frame = +2
Query: 350 GDNADCF--VKDHRPICSCRNGYEGDPYRTCRVVGCRTNSECDTR 478
G N+ CF + C C G++G+PY + GC+ +EC TR
Sbjct: 245 GGNSTCFDSTRGKGYNCKCLQGFDGNPYLS---DGCQDINECTTR 286
Score = 31.5 bits (68), Expect = 0.60
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Frame = +1
Query: 529 CGPNAECF--VQKNQPLCRCRVGFEGDAYL--GCNAI-ECRSN-GDCPRDKQCK 672
CG N+ CF + C+C GF+G+ YL GC I EC + +C C+
Sbjct: 244 CGGNSTCFDSTRGKGYNCKCLQGFDGNPYLSDGCQDINECTTRIHNCSDTSTCE 297
>At1g19390.1 68414.m02412 wall-associated kinase, putative similar
to GB:CAB42872 from [Arabidopsis thaliana] (Plant Mol.
Biol. 39 (6), 1189-1196 (1999))
Length = 788
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/76 (30%), Positives = 32/76 (42%), Gaps = 3/76 (3%)
Frame = +1
Query: 472 HPRSLYKWKLYKSCLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYL--GCNAI-ECRSN 642
+ S Y KL SC+ N+ + C C G+EG+ YL GC I EC N
Sbjct: 293 YDNSTYNIKLVTSCICNNVTISGTD------YANCGCSQGYEGNPYLPGGCKDINECLRN 346
Query: 643 GDCPRDKQCKAHRCIN 690
R ++ C+N
Sbjct: 347 SYGQRQNCRESDTCVN 362
Score = 31.1 bits (67), Expect = 0.80
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 3/43 (6%)
Frame = +2
Query: 392 CSCRNGYEGDPYRT--CRVVG-CRTNSECDTREACINGNCINL 511
C C GYEG+PY C+ + C NS + + C+NL
Sbjct: 321 CGCSQGYEGNPYLPGGCKDINECLRNSYGQRQNCRESDTCVNL 363
>At4g31100.1 68417.m04414 wall-associated kinase, putative
Length = 786
Score = 31.9 bits (69), Expect = 0.46
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 4/38 (10%)
Frame = +2
Query: 392 CSCRNGYEGDPYRT--CRVVG-CRTNSE-CDTREACIN 493
C C GY+G+PY + CR + C+ N + C + C+N
Sbjct: 318 CECNLGYKGNPYDSDGCRDIDECKENPKYCKETDTCVN 355
>At3g52850.1 68416.m05824 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
(GP:1737218) [Arabidopsis thaliana]
Length = 623
Score = 31.9 bits (69), Expect = 0.46
Identities = 18/61 (29%), Positives = 25/61 (40%), Gaps = 1/61 (1%)
Frame = +1
Query: 511 CLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCI 687
C S G V + C+C +GF+GD C + EC+ C QC +C
Sbjct: 475 CWRESRGGFTYSACVDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVC----QCPECKCK 530
Query: 688 N 690
N
Sbjct: 531 N 531
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Frame = +2
Query: 371 VKDHRPICSCRNGYEGDPYRTCRVVG-CRTNSECDTREA-CIN 493
V DH C C G++GD + C V C+ + C E C N
Sbjct: 489 VDDHSKDCKCPLGFKGDGVKNCEDVDECKEKTVCQCPECKCKN 531
>At1g21210.1 68414.m02651 wall-associated kinase 4
Length = 738
Score = 31.9 bits (69), Expect = 0.46
Identities = 13/37 (35%), Positives = 19/37 (51%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSECDTREACINGNC 502
C C+ G++G+PY GC+ +EC T NC
Sbjct: 261 CKCKGGFQGNPYLQ---NGCQDINECTTANPIHKHNC 294
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/71 (25%), Positives = 26/71 (36%)
Frame = +1
Query: 505 KSCLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYLGCNAIECRSNGDCPRDKQCKAHRC 684
K C N C +A C+C+ GF+G+ YL C+ +C H C
Sbjct: 242 KKCGVNGICSNSASGIGYT----CKCKGGFQGNPYLQNG---CQDINECTTANPIHKHNC 294
Query: 685 INPCFIDNICG 717
+N G
Sbjct: 295 SGDSTCENKLG 305
>At4g20110.1 68417.m02943 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222; identical to vacuolar sorting
receptor-like protein (GI:2827665) [Arabidopsis
thaliana]
Length = 625
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 1/40 (2%)
Frame = +1
Query: 574 CRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
C+C GF+GD L C I EC+ C QC RC N
Sbjct: 499 CKCPEGFQGDG-LTCEDINECKERSVC----QCSGCRCKN 533
>At3g55270.1 68416.m06138 MAP kinase phosphatase (MKP1) identical to
MAP kinase phosphatase (MKP1) GI:13540262 from
[Arabidopsis thaliana]
Length = 534
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Frame = +2
Query: 488 INGNCINLV*QTAHVDQMPNASFKRTNRCVVVVLDL-KETPI*VVMR*NVDQTEIVHVIS 664
++ NC +LV D + N + + ++ +DL K+TPI +V R + DQTE++ ++S
Sbjct: 475 LDNNC-SLVDSNKAADTVENVDWVQIGESILCQMDLPKDTPIKIV-RESEDQTELLALLS 532
>At2g14720.2 68415.m01657 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 553 VQKNQPLCRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
V K+ C C GF+GD C I EC+ C QC C N
Sbjct: 494 VDKDSVKCECPPGFKGDGVKKCEDINECKEKKAC----QCPECSCKN 536
>At2g14720.1 68415.m01656 vacuolar sorting receptor, putative
identical to GB:U79960 GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 553 VQKNQPLCRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
V K+ C C GF+GD C I EC+ C QC C N
Sbjct: 494 VDKDSVKCECPPGFKGDGVKKCEDINECKEKKAC----QCPECSCKN 536
>At1g61360.1 68414.m06915 S-locus lectin protein kinase family
protein contains protein kinase domain, Pfam:PF00069;
contains S-locus glycoprotein family domain,
Pfam:PF00954
Length = 821
Score = 29.9 bits (64), Expect = 1.8
Identities = 13/30 (43%), Positives = 16/30 (53%)
Frame = +1
Query: 508 SCLTNSTCGPNAECFVQKNQPLCRCRVGFE 597
SC CGP C V+ P+C+C GFE
Sbjct: 279 SCDLYGRCGPFGLC-VRSGTPMCQCLKGFE 307
>At2g30290.1 68415.m03687 vacuolar sorting receptor, putative
similar to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737218
Length = 625
Score = 29.5 bits (63), Expect = 2.4
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 377 DHRPICSCRNGYEGDPYRTCRVVG-CRTNSECDTREA-CIN 493
DH C C G+ GD + C+ V C + C R+ C N
Sbjct: 495 DHSKGCKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCKN 535
Score = 28.7 bits (61), Expect = 4.3
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)
Frame = +1
Query: 574 CRCRVGFEGDAYLGCNAI-ECRSNGDCP-RDKQCK 672
C+C GF GD C + EC C RD +CK
Sbjct: 500 CKCPPGFIGDGLKECKDVNECEEKTACQCRDCKCK 534
>At2g14740.2 68415.m01663 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 553 VQKNQPLCRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
V K+ C C GF+GD C I EC+ C QC C N
Sbjct: 494 VDKDSVKCECPPGFKGDGTKKCEDINECKEKKAC----QCPECSCKN 536
>At2g14740.1 68415.m01662 vacuolar sorting receptor, putative nearly
identical to vacuolar sorting receptor homolog
[Arabidopsis thaliana] GI:1737220; contains a
calcium-binding EGF-like domain signature
Length = 628
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/47 (36%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Frame = +1
Query: 553 VQKNQPLCRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
V K+ C C GF+GD C I EC+ C QC C N
Sbjct: 494 VDKDSVKCECPPGFKGDGTKKCEDINECKEKKAC----QCPECSCKN 536
>At1g30900.1 68414.m03780 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 631
Score = 29.5 bits (63), Expect = 2.4
Identities = 17/40 (42%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Frame = +1
Query: 574 CRCRVGFEGDAYLGCNAI-ECRSNGDCPRDKQCKAHRCIN 690
CRC GF+GD L C I EC+ C QC C N
Sbjct: 498 CRCPPGFKGDG-LKCEDIDECKEQSAC----QCDGCNCKN 532
>At2g34940.1 68415.m04289 vacuolar sorting receptor, putative
similar to BP-80 vacuolar sorting receptor [Pisum
sativum] GI:1737222
Length = 618
Score = 28.7 bits (61), Expect = 4.3
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 2/35 (5%)
Frame = +1
Query: 574 CRCRVGFEGDAYLGCNAI-ECRSNGDCPRDK-QCK 672
CRC +GF GD L C I EC+ C D +CK
Sbjct: 497 CRCPLGFLGDG-LKCEDIDECKEKSACKCDGCKCK 530
>At2g47680.1 68415.m05955 zinc finger (CCCH type) helicase family
protein similar to SP|Q28141 ATP-dependent RNA helicase
A (Nuclear DNA helicase II) (DEAD-box protein 9) {Bos
taurus}; contains Pfam profiles PF00271: Helicase
conserved C-terminal domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 1015
Score = 28.3 bits (60), Expect = 5.6
Identities = 19/68 (27%), Positives = 26/68 (38%), Gaps = 3/68 (4%)
Frame = +3
Query: 69 CIMDGDCPSGHACLKDECREAC---SELKPCKGNSRCSVSDSIPFRTLICRCPEGFVPSE 239
C G C H R AC + + C+ C S ++ RT P +P E
Sbjct: 741 CNRGGQCTFTHTL--QSTRPACKFFASSQGCRNGESCLFSHAMRRRTTSYLPPPQCLPEE 798
Query: 240 DGSCKRPI 263
DGS P+
Sbjct: 799 DGSSTSPL 806
>At1g18860.1 68414.m02348 WRKY family transcription factor contains
Pfam profile: PF03106 WRKY DNA -binding domain
Length = 480
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/63 (25%), Positives = 31/63 (49%), Gaps = 4/63 (6%)
Frame = +3
Query: 147 PC-KGNSRCSVSDSIPFRTLICRCPEG---FVPSEDGSCKRPIYHPLVALRIMTAQTKSL 314
PC + RC+++ S P R + RC E + + +G+ P+ A+ T+ S+
Sbjct: 208 PCPRAYYRCTIAASCPVRKQVQRCSEDMSILISTYEGTHNHPLPMSATAMASATSAAASM 267
Query: 315 VLT 323
+L+
Sbjct: 268 LLS 270
>At1g16120.1 68414.m01932 wall-associated kinase, putative contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 730
Score = 27.9 bits (59), Expect = 7.4
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Frame = +2
Query: 392 CSCRNGYEGDPYRTCRVVGCRTNSECDTREAC-INGNCINL 511
C C GY G+PY GC C+ C + +C+N+
Sbjct: 297 CYCDYGYTGNPYLR---GGCVDTDSCEGNHNCGEDAHCVNM 334
>At1g10170.1 68414.m01147 NF-X1 type zinc finger family protein
contains Pfam PF01422: NF-X1 type zinc finger; similar
to transcriptional repressor NF-X1 (SP:Q12986) [Homo
sapiens]; similar to EST gb|T21002
Length = 1188
Score = 27.9 bits (59), Expect = 7.4
Identities = 23/76 (30%), Positives = 29/76 (38%), Gaps = 3/76 (3%)
Frame = +1
Query: 478 RSLYKWKLYKSCLTNSTCGPNAECFVQKNQPLCRCRVGFEG-DAYL--GCNAIECRSNGD 648
R L +L+ +C G C VQ NQ CRC + Y+ A +
Sbjct: 508 RKLLPCRLH-TCNEMCHAGDCPPCLVQVNQK-CRCGSTSRAVECYITTSSEAEKFVCAKP 565
Query: 649 CPRDKQCKAHRCINPC 696
C R K C HRC C
Sbjct: 566 CGRKKNCGRHRCSERC 581
>At5g50990.1 68418.m06322 pentatricopeptide (PPR) repeat-containing
protein contains INTERPRO:IPR002885 PPR repeats
Length = 511
Score = 27.5 bits (58), Expect = 9.8
Identities = 18/57 (31%), Positives = 24/57 (42%)
Frame = +1
Query: 133 VPNLSRAKEIPVVQFQTVYRSEL*FVVAQKALYLLKMVAASGQFTTPWLLFG**LHR 303
+ NLS+AK V +Y S + AQK L+ WL FG +HR
Sbjct: 334 IQNLSKAKSGDYVLLSNIYSSTKKWESAQKVRELMSKEGIRKAKGKSWLEFGGMIHR 390
>At4g11900.1 68417.m01893 S-locus lectin protein kinase family
protein contains Pfam domains, PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain, and
PF01453: Lectin (probable mannose binding)
Length = 849
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/50 (30%), Positives = 22/50 (44%)
Frame = +1
Query: 511 CLTNSTCGPNAECFVQKNQPLCRCRVGFEGDAYLGCNAIECRSNGDCPRD 660
C ++CG C + P CRC GF+ + G + S G C R+
Sbjct: 315 CDVYNSCGSFGICNENREPPPCRCVPGFKREFSQGSDDSNDYSGG-CKRE 363
>At2g19130.1 68415.m02233 S-locus lectin protein kinase family
protein contains Pfam domains PF00954: S-locus
glycoprotein family, PF00069: Protein kinase domain and
PF01453: Lectin (probable mannose binding)
Length = 828
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 123 REACSELKPCKGNSRCSVSDSIPFRTLICRCPEGFVP 233
R+ C + C CS S PF CRCP+GF P
Sbjct: 287 RQQCQVYRYCGSFGICS-DKSEPF----CRCPQGFRP 318
>At1g47320.1 68414.m05239 expressed protein similar to putative
non-LTR retroelement reverse transcriptase GB:AAD21515
GI:4510429 from [Arabidopsis thaliana]; expression
supported by MPSS
Length = 259
Score = 27.5 bits (58), Expect = 9.8
Identities = 13/32 (40%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Frame = +3
Query: 33 HCQKATVLNEP----ECIMDGDCPSGHACLKD 116
HC + V E C D DCP H C KD
Sbjct: 56 HCSRQQVETELTKVIRCKTDRDCPDSHQCPKD 87
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,222,209
Number of Sequences: 28952
Number of extensions: 397261
Number of successful extensions: 1039
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 963
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1624036432
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -