Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00313
(590 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.23
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 32 0.30
SB_17517| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.072) 31 0.70
SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.70
SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.1
SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0) 29 2.1
SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11) 29 2.8
SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.8
SB_10606| Best HMM Match : I-set (HMM E-Value=0) 29 2.8
SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07) 29 3.8
SB_23022| Best HMM Match : CUB (HMM E-Value=0) 28 5.0
SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 28 6.6
SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24) 28 6.6
SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032) 28 6.6
SB_10427| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45) 28 6.6
SB_48561| Best HMM Match : AAA (HMM E-Value=0) 27 8.7
SB_32671| Best HMM Match : SerH (HMM E-Value=0.4) 27 8.7
SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8) 27 8.7
SB_18106| Best HMM Match : E-MAP-115 (HMM E-Value=7.6) 27 8.7
>SB_50768| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1069
Score = 32.7 bits (71), Expect = 0.23
Identities = 26/88 (29%), Positives = 36/88 (40%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
E PT PS P T A+ P +T + P++ G AL+T+P +TRP A
Sbjct: 696 EKANPTNKPSVP-TDASTPTLGKTESPTDNPASTGNP---ALKTTPHTTTRPSEATA--- 748
Query: 491 SDNSDDSKISSVSLAKTAYTMEPGTNYP 574
+ I + T T P N P
Sbjct: 749 --KPQATAIPPATTKPTGSTQSPTDNSP 774
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 32.3 bits (70), Expect = 0.30
Identities = 25/100 (25%), Positives = 46/100 (46%), Gaps = 5/100 (5%)
Frame = +2
Query: 275 NSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLS-----VALQ 439
N SSV T + PT SPS TT+++ T A+ + + + S +A+
Sbjct: 736 NGTTSSVYETIAVNATPTISPSPNGTTSSVYETIAVNATPSISLSTNETASSPYETIAVN 795
Query: 440 TSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEP 559
++P +S P ++ Y + ++ +SV +K T+ P
Sbjct: 796 STPSISPSPNGTTSFMYETIAVNATSTSVRTSKVYETILP 835
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Frame = +2
Query: 275 NSLRSSVRATTRESKYPTGSPSCPWTTATLPVT-SETAASKLLPSARGRSLSV----ALQ 439
N SSV T + PT SPS TT+++ T + + S + PS G + SV A+
Sbjct: 437 NGTTSSVYETIAVNATPTISPSPNGTTSSVYETIAVNSTSSISPSPNGTTSSVYETIAVN 496
Query: 440 TSPGLSTRPKSVVAYGY 490
++P +S P + Y
Sbjct: 497 STPSISPSPNGTTSSVY 513
Score = 29.1 bits (62), Expect = 2.8
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 6/96 (6%)
Frame = +2
Query: 275 NSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLL-PSARGRSLSV----ALQ 439
N SSV T + PT SPS TT+++ T A+ ++ PS G + SV A+
Sbjct: 575 NGTTSSVYETIAVNATPTISPSPNGTTSSVYETIAVNATPIISPSPNGTTSSVYETIAVN 634
Query: 440 TSPGLSTRPKSVVAYGYSDNSDDSKIS-SVSLAKTA 544
+P +S P + Y + ++ S S+S +TA
Sbjct: 635 ATPIISPSPNGTTSSVYETIAVNATPSISLSTNETA 670
Score = 28.3 bits (60), Expect = 5.0
Identities = 27/97 (27%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVT--SETAASKLLPSARGRSLSVALQTSPGLST 460
S+V ATT S P G+ + + T TL T S T A+ + + SLS+ TS T
Sbjct: 295 SAVNATTTISPSPNGTTTAVYETLTLNATTSSSTYATVAVNATPTISLSLNGTTSSVYET 354
Query: 461 -RPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPGTN 568
S + S N S + + ++ P N
Sbjct: 355 IAVNSTSSISPSPNGTTSSVYETITVNSTSSISPSPN 391
Score = 27.9 bits (59), Expect = 6.6
Identities = 22/88 (25%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSL--SVALQTSPGLST 460
++V ATT S P G+ S + T + T+ + S P+ S+ ++ + T+ +S
Sbjct: 212 AAVNATTTISPSPNGTTSSVYVTIVVNTTTSISPS---PNRTTSSMYETITVNTTTSISP 268
Query: 461 RPKSVVAYGYSDNSDDSKISSVSLAKTA 544
P + Y + +S SS S +A
Sbjct: 269 SPNETTSSMYVTIAVNSTTSSYSFETSA 296
>SB_17517| Best HMM Match : CRAL_TRIO_N (HMM E-Value=0.072)
Length = 2374
Score = 31.1 bits (67), Expect = 0.70
Identities = 24/101 (23%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPG 451
TN ++ V+ ++S++P S T +T +S +LPS SVA Q
Sbjct: 2190 TNQVQQPVQEVVKDSRFPVSSLEASGGAMTSSSQEDTRSSSILPSPP----SVAFQAKQT 2245
Query: 452 LSTRPKSVVAYGYSDNSDDSKISSVSL-AKTAYTMEPGTNY 571
LS + +D++ S++SL +++ ME +++
Sbjct: 2246 LSGETSQLNLRETNDSALSPDESNMSLDESSSFDMESSSSH 2286
>SB_2840| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2248
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/75 (25%), Positives = 33/75 (44%), Gaps = 2/75 (2%)
Frame = +2
Query: 323 PTGSPSCPWTTATLPVTSETAASKLLPSAR--GRSLSVALQTSPGLSTRPKSVVAYGYSD 496
P G P P + +SET KLLP + G S L+ +P ++ P+ S+
Sbjct: 1511 PEGKPGSPGQPSRQSASSETTNEKLLPGKQSPGASSDTELKGTPSVTNTPQLQGTSSASE 1570
Query: 497 NSDDSKISSVSLAKT 541
++ + S + + T
Sbjct: 1571 STQTQQSSQTTQSTT 1585
>SB_4587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 29.9 bits (64), Expect = 1.6
Identities = 30/121 (24%), Positives = 50/121 (41%), Gaps = 4/121 (3%)
Frame = +2
Query: 209 WGEGKVTNLDKIRGFLGATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAA 388
W E +++N+DK LG + + + + + T GS + A PVT+ TA
Sbjct: 270 WDEMEISNIDKFADLLGIPVPPDEDKPGLPSITDAQSPVQGSLNS--QNAISPVTTPTAP 327
Query: 389 SKLLPSARGRSLSVALQTSPGLS----TRPKSVVAYGYSDNSDDSKISSVSLAKTAYTME 556
+ +R ++ SP S T P S V + N+ S+I V + + E
Sbjct: 328 VEREEGSRSPDHALCSNRSPVSSPLAHTTPTSTVPREHLKNASPSQI--VESGSSPHAKE 385
Query: 557 P 559
P
Sbjct: 386 P 386
>SB_16235| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4072
Score = 29.5 bits (63), Expect = 2.1
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 2/91 (2%)
Frame = +2
Query: 245 RGFLGATM*TNSLRSSVRATT--RESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGR 418
RG A+ T+S + V TT RES + G+ P T T + ++ RG
Sbjct: 804 RGTTVASESTDSESTIVPVTTVARESTFAPGTSVSPEITVAPGPTIGSESTV----TRGA 859
Query: 419 SLSVALQTSPGLSTRPKSVVAYGYSDNSDDS 511
+++ A +PG + P+S VA G + S+ S
Sbjct: 860 TVASASTDAPGTTVSPESTVAPGIAAASESS 890
Score = 29.1 bits (62), Expect = 2.8
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 7/110 (6%)
Frame = +2
Query: 257 GATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVT-----SETAASKLLP--SARG 415
G T+ ++S SS +S GS P +TA T + T S L +A G
Sbjct: 441 GTTVASDSTFSSGTTLRSKSTITPGSTVSPKSTAAPGTTVSREGTNTPDSLLAEGTTAPG 500
Query: 416 RSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPGT 565
+L PG + P+S VA G + S+ + ++A +A T PGT
Sbjct: 501 TTLGNESTVVPGTTISPESTVAPGTTVTSESTVTRGATVA-SAITDAPGT 549
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/98 (24%), Positives = 41/98 (41%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPG 451
+ S + A ES +G+ P +T V ET + RG +++ A +PG
Sbjct: 1192 SESTAELLTAAASESTVASGTTLAPEST----VAPETTVASESTVTRGATVASASTDAPG 1247
Query: 452 LSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPGT 565
+ P+S G + S +S ++ S T + P T
Sbjct: 1248 TTVSPESTFTPG-TTVSPESTVAQESTIATVISAAPET 1284
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/104 (24%), Positives = 48/104 (46%), Gaps = 9/104 (8%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTAT--LPVTSETAASK------LLPSARGRSLS 427
T +L +S+ + ES +G+ P +T V SE+ ++ A G ++S
Sbjct: 1512 TVTLETSISSEASESTVASGTTLAPESTVAPETTVASESTVTRGATVASASTDAPGTTVS 1571
Query: 428 VALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLA-KTAYTME 556
+PG + P+S VA + +S+ + +LA ++ T+E
Sbjct: 1572 PESTFTPGTTVSPESTVAQESTVSSESTAAPETNLASESTVTLE 1615
>SB_28063| Best HMM Match : ABC_tran (HMM E-Value=0)
Length = 1238
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/56 (32%), Positives = 31/56 (55%)
Frame = +2
Query: 140 PYFGMYHLVKIPIDRGLVHQVDYWGEGKVTNLDKIRGFLGATM*TNSLRSSVRATT 307
P + +++ + I +GL + + K T LD+++GFL AT S ++S R TT
Sbjct: 316 PLTTIINILSVTIGKGLPLTMYSIKDAK-TALDRVQGFLVATYAVKSPKTSARVTT 370
>SB_53888| Best HMM Match : TSP_3 (HMM E-Value=9.2e-11)
Length = 1012
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/47 (36%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTS--ETAASKLLPS 406
T + S TT+ P SP P T ATLP T E K +P+
Sbjct: 896 TTANPGSPSTTTKSVTTPQTSPKTPQTPATLPTTQTPEPGTEKTMPT 942
>SB_32754| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 5659
Score = 29.1 bits (62), Expect = 2.8
Identities = 24/101 (23%), Positives = 44/101 (43%), Gaps = 2/101 (1%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVT--SETAASKLLPSARGRSLSVA 433
+T+ + SS +E+ G+ P +T T S+T A A+ +++
Sbjct: 1411 STVAKKTTMSSETTMAQETTVAPGTTMAPESTLASKTTMVSQTTAGPETTLAQETTMASK 1470
Query: 434 LQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTME 556
PG + PKS VA + + +S ++SV+ T+E
Sbjct: 1471 STVEPGTTLAPKSTVA-SVTTMAPESTVASVTTMAPESTLE 1510
Score = 28.3 bits (60), Expect = 5.0
Identities = 26/103 (25%), Positives = 42/103 (40%), Gaps = 2/103 (1%)
Frame = +2
Query: 257 GATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVT--SETAASKLLPSARGRSLSV 430
G T+ S T ES + P +T +T SET A A+ +++
Sbjct: 1968 GTTITPKSTEVPPTTMTPESTVTPETTMVPESTVGPEITMVSETTAGPETTLAQETTMAS 2027
Query: 431 ALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEP 559
PG + PKS VA + + +S ++SV+ T+ P
Sbjct: 2028 KSTVEPGTTLAPKSTVA-SVTTMAPESTVASVTTMAPDSTLAP 2069
>SB_10606| Best HMM Match : I-set (HMM E-Value=0)
Length = 872
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = -3
Query: 375 DVTGSVAVVHGHDGDPVGYLLSLVVAL-TDERKLFVHIVAPRKPLILSR 232
D G++++V D Y+ + V A+ +DE + FV++V P P I+++
Sbjct: 171 DENGTLSIVLRRTTDAGRYVCTAVNAIGSDEAETFVYVVEPNYPRIVAK 219
>SB_53064| Best HMM Match : Hexapep (HMM E-Value=2.7e-07)
Length = 585
Score = 28.7 bits (61), Expect = 3.8
Identities = 21/77 (27%), Positives = 36/77 (46%)
Frame = +2
Query: 257 GATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVAL 436
G T + S S+ ES G+ P +T P T+ T+ S + RG +++ A+
Sbjct: 508 GTTESSESTVESLTTAASESTVAPGTTLSPESTVA-PGTTVTSESTV---TRGATVASAI 563
Query: 437 QTSPGLSTRPKSVVAYG 487
+PG + P+S + G
Sbjct: 564 TDAPGTTVLPESTASPG 580
>SB_23022| Best HMM Match : CUB (HMM E-Value=0)
Length = 1307
Score = 28.3 bits (60), Expect = 5.0
Identities = 25/93 (26%), Positives = 44/93 (47%), Gaps = 1/93 (1%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPG 451
T S S+R++ S+ PT PS + A S + + + PSA SV P
Sbjct: 461 TQSHVGSIRSSVSLSEVPTILPSPVSSVAVQASVSSSVLASVNPSAIASVSSVQESDYPS 520
Query: 452 L-STRPKSVVAYGYSDNSDDSKISSVSLAKTAY 547
+ ++ P S V G S + S ++S+ +++A+
Sbjct: 521 IQASVPSSAVEKGSS--TQTSGLTSLQASESAF 551
>SB_39072| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1011
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 332 SPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKS 472
+PS P T +T P+T T ++ PSA G ++ + ++P + P +
Sbjct: 152 TPSTPSTPST-PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPST 197
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 332 SPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKS 472
+PS P T +T P+T T ++ PSA G ++ + ++P + P +
Sbjct: 702 TPSTPSTPST-PITPGTPSTPSTPSAPGTPITPSTLSTPSTPSTPST 747
>SB_13438| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 672
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -2
Query: 289 RAQTVRSHCSSEEASYLVKVSHFSFSPVIDLVYQPSVDRDLHEVVHTEVGYWGVRIQQ 116
+A + +H S + + +SH + PVI V+ + + ++ HT + G+R Q+
Sbjct: 269 KATGLGAHMSIRHVNNIFMISHGALHPVIYFVFNENFRKKFRQLTHTWLTR-GIRFQR 325
>SB_10730| Best HMM Match : 7tm_1 (HMM E-Value=1.5e-24)
Length = 654
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/58 (24%), Positives = 29/58 (50%)
Frame = -2
Query: 289 RAQTVRSHCSSEEASYLVKVSHFSFSPVIDLVYQPSVDRDLHEVVHTEVGYWGVRIQQ 116
+A + +H S + + +SH + PVI V+ + + ++ HT + G+R Q+
Sbjct: 254 KATGLGAHMSIRHVNNIFMISHGALHPVIYFVFNENFRKKFRQLTHTWLTR-GIRFQR 310
>SB_39578| Best HMM Match : DUF1213 (HMM E-Value=0.032)
Length = 521
Score = 27.9 bits (59), Expect = 6.6
Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
Frame = +2
Query: 278 SLRSSVRATTRESKYPTGSPSCPWTTATLPVTS-ETAASKLLPSARGRSLSVALQTSPGL 454
S ++S + + S+ + S + T P TS +T K L ++ S ++ +TSP
Sbjct: 321 SRKTSQKTSLNASRKTSRKTSLKRSLKTSPKTSPKTMRMKSLKTSPKTSPEISPRTSPKT 380
Query: 455 STRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPG 562
S++ + S N+ + SL ++ T +PG
Sbjct: 381 SSKTSPKTSLKTSLNTSLNTSQKTSLKRSLNTNKPG 416
>SB_10427| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 137
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/50 (28%), Positives = 25/50 (50%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVAL 436
++++A+ + K P G+PS P A +T + + L RS VA+
Sbjct: 60 NNIKASEKSDKLPKGAPSLPDAVAAKIITEKYSKEFLQQLTAFRSAEVAM 109
>SB_9125| Best HMM Match : Sulfotransfer_2 (HMM E-Value=1.4013e-45)
Length = 480
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = -1
Query: 113 PHLCRSLAQRRLPILPLTVFLPVK 42
P +CRS+ P +P++V+LP++
Sbjct: 118 PSICRSVYLSAYPSVPMSVYLPIR 141
>SB_48561| Best HMM Match : AAA (HMM E-Value=0)
Length = 2021
Score = 27.5 bits (58), Expect = 8.7
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +2
Query: 317 KYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSD 496
+YPT + + T PVTS+ A + +P V+ SP T SV+ G +
Sbjct: 250 RYPTSNSPPKTSNDTNPVTSDQAQTGPIPDISILRQPVSTYNSPYGVTAYSSVIQQGQTG 309
Query: 497 NSDDSKISSVSLAKTA 544
+++ + +A TA
Sbjct: 310 FNNNFQQQPYIVASTA 325
>SB_32671| Best HMM Match : SerH (HMM E-Value=0.4)
Length = 406
Score = 27.5 bits (58), Expect = 8.7
Identities = 25/97 (25%), Positives = 42/97 (43%), Gaps = 5/97 (5%)
Frame = +2
Query: 305 TRESKYPTGSPSCPWTTA--TLPVTSETAASKLLPSARGRSLSVALQTSPGL---STRPK 469
T K + +P+ TT+ +LP TS AS P+A + ++L ++P L S P
Sbjct: 127 TSSLKASSNTPTALSTTSLMSLPSTSNLKASSNTPTALSTTSLMSLPSTPSLEASSNTPT 186
Query: 470 SVVAYGYSDNSDDSKISSVSLAKTAYTMEPGTNYPQT 580
++ A S + + S TA + + P T
Sbjct: 187 ALSATSLMSLPSTSSLEASSNTPTALSATSLMSLPST 223
>SB_28214| Best HMM Match : Drf_FH1 (HMM E-Value=3.8)
Length = 361
Score = 27.5 bits (58), Expect = 8.7
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = +2
Query: 275 NSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVA 433
+SLRS+ + S PT + P +T+T P T+ T + PS R+ + A
Sbjct: 11 SSLRSNKTPSKATSPKPTAPATRPTSTSTKPTTASTKPTS-PPSQAARTRNTA 62
>SB_18106| Best HMM Match : E-MAP-115 (HMM E-Value=7.6)
Length = 193
Score = 27.5 bits (58), Expect = 8.7
Identities = 16/51 (31%), Positives = 24/51 (47%)
Frame = +2
Query: 350 TTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNS 502
T+ LP E +S L +RG++ S + L RP + V G SD +
Sbjct: 9 TSVALPARIEKFSSSLTLYSRGQTTSKTANATRLLDKRPSARVTTGSSDQA 59
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,285,820
Number of Sequences: 59808
Number of extensions: 372556
Number of successful extensions: 1035
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 974
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1031
length of database: 16,821,457
effective HSP length: 78
effective length of database: 12,156,433
effective search space used: 1434459094
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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