Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00313
(590 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA... 34 0.13
AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA... 31 1.5
AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA ... 30 2.7
BT021316-1|AAX33464.1| 916|Drosophila melanogaster RE12330p pro... 29 3.6
AF227213-2|AAF43020.1| 912|Drosophila melanogaster Tara 1B isof... 29 3.6
AF227213-1|AAF43019.1| 916|Drosophila melanogaster Tara 1A isof... 29 3.6
AF227212-1|AAF43018.1| 912|Drosophila melanogaster Tara 1B isof... 29 3.6
AF227211-1|AAF43017.1| 916|Drosophila melanogaster Tara 1A isof... 29 3.6
AE014297-2169|AAN13701.1| 912|Drosophila melanogaster CG6889-PB... 29 3.6
AE014297-2168|AAF55288.2| 916|Drosophila melanogaster CG6889-PA... 29 3.6
BT010273-1|AAQ23591.1| 990|Drosophila melanogaster RE13779p pro... 29 4.7
AE014297-2110|AAF55250.2| 1052|Drosophila melanogaster CG31291-P... 29 4.7
AE014297-2109|AAF55249.2| 1138|Drosophila melanogaster CG31291-P... 29 4.7
BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p pro... 29 6.2
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 29 6.2
AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA... 29 6.2
AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD... 29 6.2
AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE... 29 6.2
AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB... 29 6.2
AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC... 29 6.2
BT009990-1|AAQ22459.1| 509|Drosophila melanogaster RE41906p pro... 28 8.2
AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1 homeodo... 28 8.2
AE014297-4684|AAO41617.1| 318|Drosophila melanogaster CG1447-PB... 28 8.2
AE014297-4683|AAF57099.3| 509|Drosophila melanogaster CG1447-PA... 28 8.2
AE014297-4682|AAS65234.1| 514|Drosophila melanogaster CG1447-PC... 28 8.2
AE013599-869|AAF58935.1| 254|Drosophila melanogaster CG13953-PA... 28 8.2
>AE014298-611|AAF45929.2| 483|Drosophila melanogaster CG32774-PA
protein.
Length = 483
Score = 34.3 bits (75), Expect = 0.13
Identities = 25/89 (28%), Positives = 38/89 (42%)
Frame = +2
Query: 302 TTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVA 481
TT + PT + + TT T+P T+ T S +S + +P ST +
Sbjct: 306 TTTSTPQPTTTTTPQPTTTTVPTTTTTTTQA---STTSQS-EITTTPAPTSSTEIGTTTT 361
Query: 482 YGYSDNSDDSKISSVSLAKTAYTMEPGTN 568
S + + S+ +A T YTMEP N
Sbjct: 362 TAGSTTTSTTTTSTTPIAYTVYTMEPYPN 390
>AE014297-2332|AAF55402.1| 2112|Drosophila melanogaster CG4090-PA
protein.
Length = 2112
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/58 (34%), Positives = 28/58 (48%), Gaps = 1/58 (1%)
Frame = +2
Query: 302 TTRESKYPTGSPSCPWTTAT-LPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKS 472
TT PT + S P TT T LP T+ T A + + + + TSP +T+P S
Sbjct: 1406 TTTTRLPPTTTTSLPPTTTTGLPPTTTTGAQPTTTTLSSETETSTVTTSPESTTQPPS 1463
>AE014296-955|AAF50778.2| 1175|Drosophila melanogaster CG4835-PA
protein.
Length = 1175
Score = 29.9 bits (64), Expect = 2.7
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 4/106 (3%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWT----TATLPVTSETAASKLLPSARGRSLSVALQ 439
T + + S TT + +PS P T ++ T+E + S + +
Sbjct: 750 TTTAKPSESTTTPRDGEGSTTPSEPSTGSSTESSTESTTEPSTESTTESTTESTTESTTE 809
Query: 440 TSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPGTNYPQ 577
+S G ST +D S+ S++S ++ TMEPGT P+
Sbjct: 810 SSTGQSTETTESSTVLSTDTSESP--STISTPPSSTTMEPGTTNPE 853
Score = 28.3 bits (60), Expect = 8.2
Identities = 22/99 (22%), Positives = 42/99 (42%), Gaps = 1/99 (1%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPV-TSETAASKLLPSARGRSLSVALQTSP 448
T + S++ +TT + PT + + T+P T+E+ + P S
Sbjct: 988 TTTTESTIISTTPTTTEPTTPKTTTTESTTIPTTTTESTTATTTP-------QTTTTEST 1040
Query: 449 GLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEPGT 565
+ST PK+ + ++ + S +++ T T EP T
Sbjct: 1041 TISTTPKTTTTESTTVSTTPTTTESTTISTTPTTTEPTT 1079
>BT021316-1|AAX33464.1| 916|Drosophila melanogaster RE12330p
protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 646 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 703
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 704 ISSSSGNTVSSNGTTPVAPT 723
>AF227213-2|AAF43020.1| 912|Drosophila melanogaster Tara 1B isoform
protein.
Length = 912
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 642 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 699
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 700 ISSSSGNTVSSNGTTPVAPT 719
>AF227213-1|AAF43019.1| 916|Drosophila melanogaster Tara 1A isoform
protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 646 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 703
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 704 ISSSSGNTVSSNGTTPVAPT 723
>AF227212-1|AAF43018.1| 912|Drosophila melanogaster Tara 1B isoform
protein.
Length = 912
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 642 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 699
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 700 ISSSSGNTVSSNGTTPVAPT 719
>AF227211-1|AAF43017.1| 916|Drosophila melanogaster Tara 1A isoform
protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 646 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 703
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 704 ISSSSGNTVSSNGTTPVAPT 723
>AE014297-2169|AAN13701.1| 912|Drosophila melanogaster CG6889-PB,
isoform B protein.
Length = 912
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 642 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 699
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 700 ISSSSGNTVSSNGTTPVAPT 719
>AE014297-2168|AAF55288.2| 916|Drosophila melanogaster CG6889-PA,
isoform A protein.
Length = 916
Score = 29.5 bits (63), Expect = 3.6
Identities = 21/80 (26%), Positives = 33/80 (41%)
Frame = +2
Query: 311 ESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGY 490
+S T P+CP TTA S AA+ +LS + +SP S+ + +
Sbjct: 646 QSGRATPFPACPTTTAAAAAASAAAAAS--SGGAATTLSSNISSSPASSSTSSNTTSSTV 703
Query: 491 SDNSDDSKISSVSLAKTAYT 550
+S + +SS A T
Sbjct: 704 ISSSSGNTVSSNGTTPVAPT 723
>BT010273-1|AAQ23591.1| 990|Drosophila melanogaster RE13779p
protein.
Length = 990
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 353 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSL 532
TA+ + TAAS +A + + T+PG R S+ YG DN D++ ++ L
Sbjct: 683 TASATAAAATAASIAAGAAAAAGSAGSGSTAPG---RKSSIADYGLQDNDDENLKDNLGL 739
Query: 533 AK 538
+
Sbjct: 740 GE 741
>AE014297-2110|AAF55250.2| 1052|Drosophila melanogaster CG31291-PA,
isoform A protein.
Length = 1052
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 353 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSL 532
TA+ + TAAS +A + + T+PG R S+ YG DN D++ ++ L
Sbjct: 683 TASATAAAATAASIAAGAAAAAGSAGSGSTAPG---RKSSIADYGLQDNDDENLKDNLGL 739
Query: 533 AK 538
+
Sbjct: 740 GE 741
>AE014297-2109|AAF55249.2| 1138|Drosophila melanogaster CG31291-PB,
isoform B protein.
Length = 1138
Score = 29.1 bits (62), Expect = 4.7
Identities = 18/62 (29%), Positives = 30/62 (48%)
Frame = +2
Query: 353 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSL 532
TA+ + TAAS +A + + T+PG R S+ YG DN D++ ++ L
Sbjct: 769 TASATAAAATAASIAAGAAAAAGSAGSGSTAPG---RKSSIADYGLQDNDDENLKDNLGL 825
Query: 533 AK 538
+
Sbjct: 826 GE 827
>BT010301-1|AAQ23619.1| 887|Drosophila melanogaster LD09626p
protein.
Length = 887
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 183 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 212
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 28.7 bits (61), Expect = 6.2
Identities = 25/91 (27%), Positives = 37/91 (40%)
Frame = +2
Query: 278 SLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLS 457
++ S+ +TTR+S T + S TT P T+ T +K + R + T S
Sbjct: 399 TVTSTSTSTTRKSTTTTSTTSTSTTTTKRPTTT-TTTTKATTTKRTTTTKKPTTT----S 453
Query: 458 TRPKSVVAYGYSDNSDDSKISSVSLAKTAYT 550
T PK + S S S+ S T T
Sbjct: 454 TTPKPTTTTSTTPKSTTSTTSTTSTTSTTPT 484
>AE014296-771|AAF47842.3| 887|Drosophila melanogaster CG14998-PA,
isoform A protein.
Length = 887
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 183 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 212
>AE014296-770|AAN11588.2| 983|Drosophila melanogaster CG14998-PD,
isoform D protein.
Length = 983
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 147 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 176
>AE014296-769|AAN11587.2| 898|Drosophila melanogaster CG14998-PE,
isoform E protein.
Length = 898
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 147 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 176
>AE014296-768|AAF47841.3| 851|Drosophila melanogaster CG14998-PB,
isoform B protein.
Length = 851
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 147 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 176
>AE014296-767|AAN11586.2| 833|Drosophila melanogaster CG14998-PC,
isoform C protein.
Length = 833
Score = 28.7 bits (61), Expect = 6.2
Identities = 10/30 (33%), Positives = 18/30 (60%)
Frame = +2
Query: 161 LVKIPIDRGLVHQVDYWGEGKVTNLDKIRG 250
L+ +P D GLV +WG+ + T++ + G
Sbjct: 129 LLDVPADYGLVSPSAFWGQRRSTSISNVAG 158
>BT009990-1|AAQ22459.1| 509|Drosophila melanogaster RE41906p
protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQ 439
A+M S+ SS+ T+ G+P CP+TT P +AA + S+ S++
Sbjct: 411 ASMLPGSMGSSLSNTSNVGA--VGAP-CPYTTPANPYMYRSAAEPCMSSSMSSSIATL-- 465
Query: 440 TSPGLSTRPKSVVAYG--YSDNSDDSKISSVSLAKTAYT 550
L + + +G YS S S+ +S L+ YT
Sbjct: 466 ---RLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 501
>AJ001519-1|CAA04801.1| 513|Drosophila melanogaster Ptx1
homeodomain protein protein.
Length = 513
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQ 439
A+M S+ SS+ T+ G+P CP+TT P +AA + S+ S++
Sbjct: 415 ASMLPGSMGSSLSNTSNVGA--VGAP-CPYTTPANPYMYRSAAEPCMSSSMSSSIATL-- 469
Query: 440 TSPGLSTRPKSVVAYG--YSDNSDDSKISSVSLAKTAYT 550
L + + +G YS S S+ +S L+ YT
Sbjct: 470 ---RLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 505
>AE014297-4684|AAO41617.1| 318|Drosophila melanogaster CG1447-PB,
isoform B protein.
Length = 318
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQ 439
A+M S+ SS+ T+ G+P CP+TT P +AA + S+ S++
Sbjct: 220 ASMLPGSMGSSLSNTSNVGA--VGAP-CPYTTPANPYMYRSAAEPCMSSSMSSSIATL-- 274
Query: 440 TSPGLSTRPKSVVAYG--YSDNSDDSKISSVSLAKTAYT 550
L + + +G YS S S+ +S L+ YT
Sbjct: 275 ---RLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 310
>AE014297-4683|AAF57099.3| 509|Drosophila melanogaster CG1447-PA,
isoform A protein.
Length = 509
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQ 439
A+M S+ SS+ T+ G+P CP+TT P +AA + S+ S++
Sbjct: 411 ASMLPGSMGSSLSNTSNVGA--VGAP-CPYTTPANPYMYRSAAEPCMSSSMSSSIATL-- 465
Query: 440 TSPGLSTRPKSVVAYG--YSDNSDDSKISSVSLAKTAYT 550
L + + +G YS S S+ +S L+ YT
Sbjct: 466 ---RLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 501
>AE014297-4682|AAS65234.1| 514|Drosophila melanogaster CG1447-PC,
isoform C protein.
Length = 514
Score = 28.3 bits (60), Expect = 8.2
Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 2/99 (2%)
Frame = +2
Query: 260 ATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQ 439
A+M S+ SS+ T+ G+P CP+TT P +AA + S+ S++
Sbjct: 416 ASMLPGSMGSSLSNTSNVGA--VGAP-CPYTTPANPYMYRSAAEPCMSSSMSSSIATL-- 470
Query: 440 TSPGLSTRPKSVVAYG--YSDNSDDSKISSVSLAKTAYT 550
L + + +G YS S S+ +S L+ YT
Sbjct: 471 ---RLKAKQHASAGFGSPYSAPSPVSRSNSAGLSACQYT 506
>AE013599-869|AAF58935.1| 254|Drosophila melanogaster CG13953-PA
protein.
Length = 254
Score = 28.3 bits (60), Expect = 8.2
Identities = 15/45 (33%), Positives = 22/45 (48%)
Frame = +2
Query: 353 TATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYG 487
TAT T+ AA+ +A + VAL T+ + P+ AYG
Sbjct: 81 TATATATAAAAAATATAAAAAAAAVVALPTAAATAAAPQQHAAYG 125
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,142,596
Number of Sequences: 53049
Number of extensions: 541115
Number of successful extensions: 1851
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 1752
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1845
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2379510885
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -