Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00313
(590 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical pr... 32 0.35
AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenase... 32 0.35
AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenase... 32 0.35
Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical pr... 31 0.46
AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical ... 31 0.46
U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical pr... 30 1.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 29 2.5
Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical pr... 28 4.3
Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical pr... 28 4.3
AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical ... 28 5.7
Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical p... 27 7.5
Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical pr... 27 7.5
U39653-3|AAL56623.1| 1702|Caenorhabditis elegans Prion-like-(q/n... 27 7.5
AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein... 27 7.5
AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical ... 27 7.5
AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical ... 27 7.5
Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical p... 27 10.0
Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical p... 27 10.0
Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical p... 27 10.0
AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 prote... 27 10.0
AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 prote... 27 10.0
AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 prote... 27 10.0
AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical ... 27 10.0
AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical ... 27 10.0
AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts hom... 27 10.0
>U40414-2|AAA81405.2| 634|Caenorhabditis elegans Hypothetical
protein F53B3.2 protein.
Length = 634
Score = 31.9 bits (69), Expect = 0.35
Identities = 25/93 (26%), Positives = 39/93 (41%)
Frame = +2
Query: 302 TTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVA 481
TT +Y T SP+ P TT+T P T+ T+ + + + + T P +T P +
Sbjct: 196 TTERVRYATFSPNIPMTTSTTPTTT-TSTFPTSTTEKSTTAQPSTTTKP-TTTSPPTTQV 253
Query: 482 YGYSDNSDDSKISSVSLAKTAYTMEPGTNYPQT 580
++ KI K Y + P T P T
Sbjct: 254 KTILPATEAQKI----FTKPQYQIWPTTTRPMT 282
>AF003130-6|AAO38639.1| 343|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform c protein.
Length = 343
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +2
Query: 365 PVTSETAASKLLPSARGRSLSVALQTS----PGLSTRPKSVVAYGYSDNSDDSKISSVSL 532
P+ + A KLL ARGR ++VA + PGL P SV YG S D +
Sbjct: 163 PIRTTMAVKKLLKKARGRVVTVASICARVGLPGLG--PYSVSKYGVSAYCDVIRQELRPF 220
Query: 533 AKTAYTMEPG 562
+ + +EPG
Sbjct: 221 GISVHVLEPG 230
>AF003130-5|AAB54122.2| 368|Caenorhabditis elegans Dehydrogenases,
short chain protein2, isoform a protein.
Length = 368
Score = 31.9 bits (69), Expect = 0.35
Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Frame = +2
Query: 365 PVTSETAASKLLPSARGRSLSVALQTS----PGLSTRPKSVVAYGYSDNSDDSKISSVSL 532
P+ + A KLL ARGR ++VA + PGL P SV YG S D +
Sbjct: 188 PIRTTMAVKKLLKKARGRVVTVASICARVGLPGLG--PYSVSKYGVSAYCDVIRQELRPF 245
Query: 533 AKTAYTMEPG 562
+ + +EPG
Sbjct: 246 GISVHVLEPG 255
>Z81460-2|CAB03831.1| 439|Caenorhabditis elegans Hypothetical
protein C04A11.2 protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.46
Identities = 20/62 (32%), Positives = 34/62 (54%)
Frame = +2
Query: 227 TNLDKIRGFLGATM*TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPS 406
T+ +R L S R+S RA + ++ PTG+P+ T PVT+ T++S + P+
Sbjct: 152 TSTPVVRNILQQLTTPRSARTSTRAASG-NRTPTGTPNM--TRNVRPVTNRTSSSNVSPA 208
Query: 407 AR 412
A+
Sbjct: 209 AQ 210
>AL132904-6|CAD91706.2| 326|Caenorhabditis elegans Hypothetical
protein Y111B2A.9b protein.
Length = 326
Score = 31.5 bits (68), Expect = 0.46
Identities = 15/28 (53%), Positives = 18/28 (64%)
Frame = +1
Query: 127 VLPNTLLRYVPPREDPDRQRAGTPSRLL 210
V P+ L+ PP DP QR+GTPS LL
Sbjct: 4 VSPSNLVFPPPPSPDPYTQRSGTPSALL 31
>U51998-6|ABS83845.1| 825|Caenorhabditis elegans Hypothetical
protein C12D12.1c protein.
Length = 825
Score = 29.9 bits (64), Expect = 1.4
Identities = 27/101 (26%), Positives = 45/101 (44%), Gaps = 5/101 (4%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPS----CPWTTATLP-VTSETAASKLLPSARGRSLSVAL 436
TNS+ S TT TGSP+ P T T+P T++TA P+++ + +L
Sbjct: 568 TNSVTPSTGTTTVPVPTTTGSPTTQTTAPVTKPTVPSSTTQTAPPVTTPTSQPPVTTTSL 627
Query: 437 QTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTMEP 559
T+ T P + S + ++V++A T + P
Sbjct: 628 LTTLTTPTVPVTTTVVPSSATVPTTPPTTVTVAATTTSKAP 668
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 29.1 bits (62), Expect = 2.5
Identities = 15/47 (31%), Positives = 23/47 (48%)
Frame = +2
Query: 332 SPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKS 472
+PS P +TLPV +++ PSA S S +T ++ P S
Sbjct: 1627 APSIPSIPSTLPVAPSSSSVPSSPSAPSESTSTVSETPAPVNVNPAS 1673
>Z73426-5|CAO78745.1| 1607|Caenorhabditis elegans Hypothetical protein
F40F11.2b protein.
Length = 1607
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 323 PTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVA 481
P+ PS + P TS ++K LP+ + VAL T P++VVA
Sbjct: 1396 PSSKPSTSSAVSATPSTSSAVSAK-LPTGKTPGRPVALSTPRSSHKPPQAVVA 1447
>Z73426-4|CAA97793.3| 1593|Caenorhabditis elegans Hypothetical protein
F40F11.2a protein.
Length = 1593
Score = 28.3 bits (60), Expect = 4.3
Identities = 17/53 (32%), Positives = 25/53 (47%)
Frame = +2
Query: 323 PTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVA 481
P+ PS + P TS ++K LP+ + VAL T P++VVA
Sbjct: 1382 PSSKPSTSSAVSATPSTSSAVSAK-LPTGKTPGRPVALSTPRSSHKPPQAVVA 1433
>AF068716-7|AAC17746.1| 384|Caenorhabditis elegans Hypothetical
protein F26D11.2 protein.
Length = 384
Score = 27.9 bits (59), Expect = 5.7
Identities = 17/72 (23%), Positives = 30/72 (41%)
Frame = +2
Query: 374 SETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSKISSVSLAKTAYTM 553
+E KL G + A + G +T+ S Y D D + + +L++ + +
Sbjct: 126 AERIEKKLQSDLTGSNAQKANKIHMGEATKTVSKERIEYGDEKDHRRRDAPALSQNSVLI 185
Query: 554 EPGTNYPQT*RP 589
E NYP +P
Sbjct: 186 EEDDNYPAVRQP 197
>Z83217-5|CAB05684.2| 1565|Caenorhabditis elegans Hypothetical protein
C10C6.1 protein.
Length = 1565
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 287 SSVRATTRESKY---PTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLS 457
SS+R+T+ + P + S ATLP T+ + S++ S+ S S + +SP +
Sbjct: 1375 SSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAAT 1434
Query: 458 TRPKSVV 478
+ S+V
Sbjct: 1435 SSGISIV 1441
>Z81534-7|CAN86914.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>Z81534-6|CAN86913.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>Z49130-10|CAD59157.2| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>Z49130-9|CAA88964.2| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>U41994-9|AAK31523.1| 786|Caenorhabditis elegans Hypothetical
protein F59A6.3 protein.
Length = 786
Score = 27.5 bits (58), Expect = 7.5
Identities = 20/70 (28%), Positives = 31/70 (44%)
Frame = +2
Query: 335 PSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDDSK 514
PS WT T T+ TA+++ S S S+ TS ST P+ D + +
Sbjct: 97 PSPVWTNCT--ETTSTASTEFTIS----STSLKTSTSDSTSTEPRISTTTDTKDTTTEDP 150
Query: 515 ISSVSLAKTA 544
+SS + T+
Sbjct: 151 VSSTDQSSTS 160
>U39653-3|AAL56623.1| 1702|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 65,
isoform a protein.
Length = 1702
Score = 27.5 bits (58), Expect = 7.5
Identities = 13/33 (39%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Frame = +2
Query: 482 YGYSDNSDDSKISSVSL-AKTAYTMEPGTNYPQ 577
YGYSD + S SS S+ + +Y+M+P ++ P+
Sbjct: 332 YGYSDGNGGSSSSSSSVYSSYSYSMQPTSDPPK 364
>AM086627-1|CAJ31105.1| 1565|Caenorhabditis elegans KIN-4 protein
protein.
Length = 1565
Score = 27.5 bits (58), Expect = 7.5
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 3/67 (4%)
Frame = +2
Query: 287 SSVRATTRESKY---PTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLS 457
SS+R+T+ + P + S ATLP T+ + S++ S+ S S + +SP +
Sbjct: 1375 SSLRSTSNSHHHHHHPASTSSVASAPATLPSTTPSNLSRMASSSPSSSASNSGTSSPAAT 1434
Query: 458 TRPKSVV 478
+ S+V
Sbjct: 1435 SSGISIV 1441
>AL032667-2|CAN86634.1| 3653|Caenorhabditis elegans Hypothetical
protein T06D8.1b protein.
Length = 3653
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>AL032667-1|CAN86633.1| 3719|Caenorhabditis elegans Hypothetical
protein T06D8.1a protein.
Length = 3719
Score = 27.5 bits (58), Expect = 7.5
Identities = 17/58 (29%), Positives = 26/58 (44%)
Frame = +2
Query: 272 TNSLRSSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLSVALQTS 445
T + + +TT S T + + T +TS TAA +L SA S + + TS
Sbjct: 662 TAATPKGIESTTVASSETTSAEAVTTTQKQADITSTTAAPELTSSASQESTTTTVATS 719
>Z81038-14|CAI79153.1| 696|Caenorhabditis elegans Hypothetical
protein C25A1.10b protein.
Length = 696
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 338 SCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDD 508
S P T P T++ AAS S+ VA TS + +P + A SD+SDD
Sbjct: 325 STPAKTTPKP-TAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDD 380
>Z81038-13|CAB02755.1| 971|Caenorhabditis elegans Hypothetical
protein C25A1.10a protein.
Length = 971
Score = 27.1 bits (57), Expect = 10.0
Identities = 20/57 (35%), Positives = 27/57 (47%)
Frame = +2
Query: 338 SCPWTTATLPVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDD 508
S P T P T++ AAS S+ VA TS + +P + A SD+SDD
Sbjct: 600 STPAKTTPKP-TAKKAASSSSDSSDDEKKPVAKPTSAKATPKPAAKKADSSSDSSDD 655
>Z69664-11|CAA93518.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 366 GSVAVVHGHDGDPVGYLLSLVVALTDERKLFVHIVAPRKPLILSRLVTFPS 214
G V ++GH G G +LS++ V + ++PL++S+ P+
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPN 470
>AY130758-3|AAN61519.1| 10578|Caenorhabditis elegans 1MDa_1 protein
protein.
Length = 10578
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLS 427
S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
>AY130758-2|AAN61518.1| 18519|Caenorhabditis elegans 2MDa_2 protein
protein.
Length = 18519
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLS 427
S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
>AY130758-1|AAN61517.1| 18534|Caenorhabditis elegans 2MDa_1 protein
protein.
Length = 18534
Score = 27.1 bits (57), Expect = 10.0
Identities = 16/47 (34%), Positives = 24/47 (51%)
Frame = +2
Query: 287 SSVRATTRESKYPTGSPSCPWTTATLPVTSETAASKLLPSARGRSLS 427
S+ R +TR S T S T T+ + +T + + P +GRSLS
Sbjct: 2313 STPRGSTRSSNLTTSQDSQATTKMTVS-SEDTIEAPIAPPRKGRSLS 2358
>AL022716-7|CAA18775.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 366 GSVAVVHGHDGDPVGYLLSLVVALTDERKLFVHIVAPRKPLILSRLVTFPS 214
G V ++GH G G +LS++ V + ++PL++S+ P+
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPN 470
>AL021570-1|CAA16510.2| 1479|Caenorhabditis elegans Hypothetical
protein C24F3.5 protein.
Length = 1479
Score = 27.1 bits (57), Expect = 10.0
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = -3
Query: 366 GSVAVVHGHDGDPVGYLLSLVVALTDERKLFVHIVAPRKPLILSRLVTFPS 214
G V ++GH G G +LS++ V + ++PL++S+ P+
Sbjct: 420 GEVVTLYGHHGCGSGEILSIIAGQMKPEYGEVMMEQSQRPLMISKTTDVPN 470
>AC024791-4|AAK95890.1| 1186|Caenorhabditis elegans Msh (muts
homolog) family protein 6 protein.
Length = 1186
Score = 27.1 bits (57), Expect = 10.0
Identities = 14/48 (29%), Positives = 22/48 (45%)
Frame = +2
Query: 365 PVTSETAASKLLPSARGRSLSVALQTSPGLSTRPKSVVAYGYSDNSDD 508
P S + K+L + +++S ++T S RPK VV DD
Sbjct: 41 PKISNDSEKKVLKRSNSKTVSSPVKTPRNASKRPKVVVCSSSEGEDDD 88
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,126,036
Number of Sequences: 27780
Number of extensions: 269235
Number of successful extensions: 806
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 766
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1247656244
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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