Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00312
(580 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=... 66 6e-10
UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2; ... 57 3e-07
UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 57 3e-07
UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;... 47 3e-04
UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing c... 47 3e-04
UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY0513... 44 0.003
UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514... 44 0.003
UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites dom... 38 0.17
UniRef50_A0V8U5 Cluster: Putative uncharacterized protein; n=1; ... 34 2.1
UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;... 33 3.7
UniRef50_Q57L44 Cluster: ORF16-lacZ fusion protein; n=2; Bacteri... 33 3.7
UniRef50_A3B8T4 Cluster: Putative uncharacterized protein; n=2; ... 33 6.4
UniRef50_Q57HV4 Cluster: ORF16-lacZ fusion protein; n=8; Bacteri... 32 8.5
UniRef50_Q25AR7 Cluster: H0313F03.19 protein; n=3; Oryza sativa|... 32 8.5
>UniRef50_UPI0000F2EBE8 Cluster: PREDICTED: similar to Ac1147; n=1;
Monodelphis domestica|Rep: PREDICTED: similar to Ac1147
- Monodelphis domestica
Length = 510
Score = 66.1 bits (154), Expect = 6e-10
Identities = 35/54 (64%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +1
Query: 331 MPLDVLGRTRATLKESACS-PWPRGPGNPLKLLRAGDWGLQLSPINEEFLVSAS 489
MPLDV G TRATL SAC+ P P G GNPL +R GD GLQL P+NEEF V S
Sbjct: 1 MPLDVRGCTRATLTGSACAYPTPAGAGNPLNPIRDGDRGLQLFPMNEEFPVKDS 54
>UniRef50_A5BKB8 Cluster: Putative uncharacterized protein; n=2;
Eukaryota|Rep: Putative uncharacterized protein - Vitis
vinifera (Grape)
Length = 347
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/28 (89%), Positives = 26/28 (92%)
Frame = +3
Query: 123 VGGGAWPFLVGGAICLVNSGNERDSSLL 206
+GGGAWPFLVGGAICLVNS NERD SLL
Sbjct: 1 MGGGAWPFLVGGAICLVNSVNERDLSLL 28
>UniRef50_Q6CQE3 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=3; Eukaryota|Rep: Kluyveromyces lactis strain
NRRL Y-1140 chromosome D of strain NRRL Y- 1140 of
Kluyveromyces lactis - Kluyveromyces lactis (Yeast)
(Candida sphaerica)
Length = 119
Score = 56.8 bits (131), Expect = 3e-07
Identities = 25/34 (73%), Positives = 27/34 (79%)
Frame = -1
Query: 172 TRQIAPPTKNGHAPPPTESRKSC*SVNPSGVRAW 71
+RQI PPTKNGHAPPPT+SRKS SVNP V W
Sbjct: 86 SRQITPPTKNGHAPPPTKSRKSSQSVNPYCVWTW 119
Score = 35.9 bits (79), Expect = 0.69
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = -3
Query: 380 ADSFSVARVRPRTSKGITD 324
A S SVARVRPRTSKGITD
Sbjct: 28 AGSVSVARVRPRTSKGITD 46
>UniRef50_UPI0000F2EBCE Cluster: PREDICTED: hypothetical protein;
n=1; Monodelphis domestica|Rep: PREDICTED: hypothetical
protein - Monodelphis domestica
Length = 493
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 138 MHHHPPNQERAVNLSILPVSGPG 70
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_UPI0000F2EB7B Cluster: PREDICTED: similar to splicing
coactivator subunit SRm300; n=1; Monodelphis
domestica|Rep: PREDICTED: similar to splicing
coactivator subunit SRm300 - Monodelphis domestica
Length = 598
Score = 47.2 bits (107), Expect = 3e-04
Identities = 19/23 (82%), Positives = 21/23 (91%)
Frame = -2
Query: 138 MHHHPPNQERAVNLSILPVSGPG 70
MHHHP N+ERA+NLSIL VSGPG
Sbjct: 1 MHHHPQNRERAINLSILSVSGPG 23
>UniRef50_Q7RED5 Cluster: Putative uncharacterized protein PY05130;
n=6; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY05130 - Plasmodium yoelii yoelii
Length = 402
Score = 44.0 bits (99), Expect = 0.003
Identities = 16/21 (76%), Positives = 20/21 (95%)
Frame = -2
Query: 159 LHQLRTAMHHHPPNQERAVNL 97
+H+L+TAMHHHP NQERA+NL
Sbjct: 177 IHELKTAMHHHPRNQERAINL 197
Score = 35.1 bits (77), Expect = 1.2
Identities = 24/58 (41%), Positives = 30/58 (51%)
Frame = -3
Query: 197 RVSFVTGINQTNRSTN*ERPCTTTHRIKKELLICQSFRCPGLVRFPVLSQIKPQAPLL 24
++SFV GINQTN H +K + + + FPVLSQIKPQAP L
Sbjct: 164 KISFVIGINQTNH----------IHELKTAMHHHPRNQERAINLFPVLSQIKPQAPRL 211
>UniRef50_A6NFT1 Cluster: Uncharacterized protein ENSP00000366514;
n=39; Fungi/Metazoa group|Rep: Uncharacterized protein
ENSP00000366514 - Homo sapiens (Human)
Length = 95
Score = 44.0 bits (99), Expect = 0.003
Identities = 26/63 (41%), Positives = 29/63 (46%), Gaps = 1/63 (1%)
Frame = +1
Query: 274 FLEGPAXXXXXXXXXXXXVMPLDVLGRTRATLKESAC-SPWPRGPGNPLKLLRAGDWGLQ 450
FLEG V +D+ G T T S C SP P G G L +R GDWGLQ
Sbjct: 33 FLEGQVVFSDPRLGNNRSVTLIDIWGCTCTTPTGSVCASPTPAGAGKLLNPIRDGDWGLQ 92
Query: 451 LSP 459
L P
Sbjct: 93 LFP 95
>UniRef50_Q4W1E6 Cluster: LPS-binding protein; n=1; Suberites
domuncula|Rep: LPS-binding protein - Suberites domuncula
(Sponge)
Length = 451
Score = 37.9 bits (84), Expect = 0.17
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +1
Query: 151 LVERFVWLIPVTNETLAC 204
LVE FVWLIP+TNETL C
Sbjct: 2 LVEGFVWLIPITNETLTC 19
>UniRef50_A0V8U5 Cluster: Putative uncharacterized protein; n=1;
Delftia acidovorans SPH-1|Rep: Putative uncharacterized
protein - Delftia acidovorans SPH-1
Length = 268
Score = 34.3 bits (75), Expect = 2.1
Identities = 28/82 (34%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Frame = +3
Query: 3 ARAEGHHQEWSLRLNL-TQHGKSHQARTPEGLTD*QLFLDSVGGGAWPFLVGGAICLVNS 179
AR H WS R +L ++ G+ QA PEG L S A P V A L +
Sbjct: 5 ARLRPGHPVWSFRASLLSRWGEGRQAAAPEGKA---WCLFSASAAAQPAHVAVAQHL-DH 60
Query: 180 GNERDSSLLNRRRYLGVRGLVS 245
G++RD +++ +LGV LV+
Sbjct: 61 GDQRDQHGNHQQHHLGVEALVA 82
>UniRef50_UPI0000EBE980 Cluster: PREDICTED: hypothetical protein;
n=1; Bos taurus|Rep: PREDICTED: hypothetical protein -
Bos taurus
Length = 892
Score = 33.5 bits (73), Expect = 3.7
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = -1
Query: 454 IIANPNPQHEGVSAGCPGL*ARENMLIPSV*RACGPG 344
+ + P P H G SA PG R S RACGPG
Sbjct: 663 LASTPGPDHRGRSASMPGPAGRRRRSSASRRRACGPG 699
>UniRef50_Q57L44 Cluster: ORF16-lacZ fusion protein; n=2;
Bacteria|Rep: ORF16-lacZ fusion protein - Salmonella
choleraesuis
Length = 106
Score = 33.5 bits (73), Expect = 3.7
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 349 GRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLV 480
G TRAT+ + S R G P K+ R+ DW LQL + E LV
Sbjct: 20 GYTRATMAHTKRSDLARASG-PHKVRRSPDWSLQLDSMKSESLV 62
>UniRef50_A3B8T4 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 515
Score = 32.7 bits (71), Expect = 6.4
Identities = 20/62 (32%), Positives = 29/62 (46%)
Frame = +3
Query: 30 WSLRLNLTQHGKSHQARTPEGLTD*QLFLDSVGGGAWPFLVGGAICLVNSGNERDSSLLN 209
W L+ NL + K HQ E + LD V + P +VGG L+ E+ + +N
Sbjct: 75 WELQYNLVKK-KVHQFERKEDFL--KEILDKVSSQSIPVMVGGDFNLIRHAEEKSNGHVN 131
Query: 210 RR 215
RR
Sbjct: 132 RR 133
>UniRef50_Q57HV4 Cluster: ORF16-lacZ fusion protein; n=8;
Bacteria|Rep: ORF16-lacZ fusion protein - Salmonella
choleraesuis
Length = 106
Score = 32.3 bits (70), Expect = 8.5
Identities = 19/44 (43%), Positives = 24/44 (54%)
Frame = +1
Query: 349 GRTRATLKESACSPWPRGPGNPLKLLRAGDWGLQLSPINEEFLV 480
G TRAT+ + S R G P K+ R+ DW LQL + E LV
Sbjct: 34 GYTRATMAHTKRSDLARASG-PHKVRRSPDWSLQLDSMKLESLV 76
>UniRef50_Q25AR7 Cluster: H0313F03.19 protein; n=3; Oryza
sativa|Rep: H0313F03.19 protein - Oryza sativa (Rice)
Length = 434
Score = 32.3 bits (70), Expect = 8.5
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +1
Query: 376 SACSPWPRGPGNPLKLLRAGD--WGLQLSPINEEFLVSASHKLALI 507
S C PR G P K+ G+ WGLQ+ + L KLA+I
Sbjct: 116 SYCQQRPRAAGGPHKITEVGEFVWGLQMKFVISGHLAKGHDKLAVI 161
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 626,452,538
Number of Sequences: 1657284
Number of extensions: 13368165
Number of successful extensions: 31601
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 29984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31592
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39987623712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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