Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00309
         (782 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan oxyge...    22   6.4  
AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.4  
AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan oxyge...    22   6.4  
AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory recept...    22   6.4  
DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8 prot...    21   8.4  

>AY052625-1|AAL15473.1|  135|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -3

Query: 171 KKTIYKLNTLRNLF 130
           K+ IY+L+++RN+F
Sbjct: 6   KQIIYELDSIRNIF 19


>AY052392-1|AAL15466.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -3

Query: 171 KKTIYKLNTLRNLF 130
           K+ IY+L+++RN+F
Sbjct: 66  KQIIYELDSIRNIF 79


>AY052390-1|AAL15464.1|  388|Tribolium castaneum tryptophan
           oxygenase protein.
          Length = 388

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/14 (50%), Positives = 13/14 (92%)
 Frame = -3

Query: 171 KKTIYKLNTLRNLF 130
           K+ IY+L+++RN+F
Sbjct: 66  KQIIYELDSIRNIF 79


>AM292379-1|CAL23191.2|  376|Tribolium castaneum gustatory receptor
           candidate 58 protein.
          Length = 376

 Score = 21.8 bits (44), Expect = 6.4
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +3

Query: 234 CDRMQTVCVVASNIL*YC 287
           CD++  +C + S IL  C
Sbjct: 41  CDKISAICFLLSTILGTC 58


>DQ659248-1|ABG47446.1|  496|Tribolium castaneum chitinase 8
           protein.
          Length = 496

 Score = 21.4 bits (43), Expect = 8.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = +3

Query: 282 YCCCENFSKLLHLKRKTN 335
           Y C  + SKL+ ++RK N
Sbjct: 459 YTCVSDGSKLVSIQRKCN 476


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 179,979
Number of Sequences: 336
Number of extensions: 3924
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21168876
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)