Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00309
         (782 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.          24   4.6  
AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.          24   4.6  
AF395079-1|AAK97461.1|  371|Anopheles gambiae basic helix-loop-h...    24   6.1  
AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450 pr...    23   8.1  

>AY341205-1|AAR13769.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 688 TNASSATISRSGGGGVYAPPS 750
           T  +  T + SGGGG + PP+
Sbjct: 251 TGGTGGTGTSSGGGGSFQPPT 271


>AY341204-1|AAR13768.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 688 TNASSATISRSGGGGVYAPPS 750
           T  +  T + SGGGG + PP+
Sbjct: 251 TGGTGGTGTSSGGGGSFQPPT 271


>AY341203-1|AAR13767.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 688 TNASSATISRSGGGGVYAPPS 750
           T  +  T + SGGGG + PP+
Sbjct: 251 TGGTGGTGTSSGGGGSFQPPT 271


>AY341202-1|AAR13766.1|  285|Anopheles gambiae period protein.
          Length = 285

 Score = 24.2 bits (50), Expect = 4.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 688 TNASSATISRSGGGGVYAPPS 750
           T  +  T + SGGGG + PP+
Sbjct: 251 TGGTGGTGTSSGGGGSFQPPT 271


>AF395079-1|AAK97461.1|  371|Anopheles gambiae basic
           helix-loop-helix transcriptionfactor ASH protein.
          Length = 371

 Score = 23.8 bits (49), Expect = 6.1
 Identities = 9/15 (60%), Positives = 11/15 (73%)
 Frame = +1

Query: 718 SGGGGVYAPPSRGLR 762
           SGGGG YAP + G +
Sbjct: 235 SGGGGCYAPIAGGFK 249


>AY745213-1|AAU93480.1|  171|Anopheles gambiae cytochrome P450
           protein.
          Length = 171

 Score = 23.4 bits (48), Expect = 8.1
 Identities = 18/62 (29%), Positives = 26/62 (41%)
 Frame = +2

Query: 353 IYFAKHPIIILYDRSIYEVSTFLPQTL*FTNGYYDKSEVLSRN*KSKVTKCP*VSVVLRS 532
           +  A HP I   DR+  E+   L   + +T+    + E L R  K     CP  +V  R 
Sbjct: 67  LLLAMHPEI--QDRAAAEICELLADDVEYTHETLKQMEYLERVIKESQRLCPVAAVYGRK 124

Query: 533 FI 538
            I
Sbjct: 125 TI 126


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 799,729
Number of Sequences: 2352
Number of extensions: 15836
Number of successful extensions: 31
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 31
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 81913191
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)