Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00308
         (720 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.3  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    22   4.4  
DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like pr...    22   5.8  
EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-toler...    21   7.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    21   7.6  

>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -2

Query: 491 WAVEAKEQACNSETAALFSLKK 426
           W  EAK++ C+SE    F   K
Sbjct: 153 WPDEAKKKGCSSEEVFQFECPK 174


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 21  ILDTAGQEEYSAMRDQYMRTGEGF 92
           +L    + EYSA  D Y    EGF
Sbjct: 847 LLQRGYRVEYSAASDAYTHAPEGF 870


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 21  ILDTAGQEEYSAMRDQYMRTGEGF 92
           +L    + EYSA  D Y    EGF
Sbjct: 847 LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 21  ILDTAGQEEYSAMRDQYMRTGEGF 92
           +L    + EYSA  D Y    EGF
Sbjct: 847 LLQRGYRVEYSAASDAYTHAPEGF 870


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 22.2 bits (45), Expect = 4.4
 Identities = 10/24 (41%), Positives = 12/24 (50%)
 Frame = +3

Query: 21  ILDTAGQEEYSAMRDQYMRTGEGF 92
           +L    + EYSA  D Y    EGF
Sbjct: 847 LLQRGYRVEYSAASDAYTHAPEGF 870


>DQ138190-1|ABA03054.1|  135|Tribolium castaneum bursicon-like
           protein protein.
          Length = 135

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 9/35 (25%), Positives = 18/35 (51%)
 Frame = +3

Query: 120 KSFEDMARIGADQASEGRGRGAHGTCGQQVRPTVV 224
           + F+++ R+      E       G+C  QV+P+V+
Sbjct: 38  EEFDELGRLQRICNGEVAVNKCEGSCKSQVQPSVI 72


>EF468474-1|ABR25244.1|  516|Tribolium castaneum methoprene-tolerant
           protein.
          Length = 516

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 9/21 (42%), Positives = 13/21 (61%)
 Frame = +1

Query: 604 FENSTIDYITRKRICCQLCGC 666
           FE S  +Y+TR  I  ++ GC
Sbjct: 245 FEASREEYVTRHLIDGRIIGC 265


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/13 (46%), Positives = 9/13 (69%)
 Frame = +2

Query: 2   GTRFTRHPGHGWP 40
           G+ ++RHP   WP
Sbjct: 154 GSVYSRHPYESWP 166


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,803
Number of Sequences: 336
Number of extensions: 4140
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19155320
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)