Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00308
(720 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|ch... 100 2e-22
SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr 1|... 66 6e-12
SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr 2||... 62 1e-10
SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr 1||... 50 3e-07
SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr 1|||... 44 3e-05
SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|ch... 43 4e-05
SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr 2||... 40 5e-04
SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr... 39 6e-04
SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr 1||... 38 0.001
SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces p... 36 0.006
SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces p... 36 0.006
SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces po... 33 0.041
SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces pomb... 33 0.054
SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|ch... 31 0.13
SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces pom... 31 0.22
SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr... 30 0.38
SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|ch... 29 0.88
SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces p... 29 0.88
SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr 2|... 27 2.7
SPAC4G9.04c |||cleavage and polyadenylation specificity factor |... 27 2.7
SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.6
SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomy... 26 4.7
SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces pom... 26 6.2
SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 25 8.2
SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit R... 25 8.2
>SPAC17H9.09c |ras1|ste5|GTPase Ras1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 219
Score = 100 bits (239), Expect = 2e-22
Identities = 59/132 (44%), Positives = 81/132 (61%), Gaps = 6/132 (4%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAH- 188
LLD+LDTAGQEEYSAMR+QYMRTGEGFLLV+ + S SF++++ Q + +
Sbjct: 57 LLDVLDTAGQEEYSAMREQYMRTGEGFLLVYNITSRSSFDEISTF-YQQILRVKDKDTFP 115
Query: 189 -----GTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKD 353
C + VV R G A+S + +VETSAK R+ V++AFY+LVR IR+
Sbjct: 116 VVLVANKCDLEAE-RVVSRAEGEQL--AKSMHCLYVETSAKLRLNVEEAFYSLVRTIRRY 172
Query: 354 KVSRDKKFKGKK 389
S +K F+ K+
Sbjct: 173 NKSEEKGFQNKQ 184
>SPAC9E9.07c |ypt2||GTPase Ypt2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 200
Score = 65.7 bits (153), Expect = 6e-12
Identities = 43/127 (33%), Positives = 63/127 (49%), Gaps = 3/127 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRGA 185
L I DTAGQE + + Y R G LL++ V KSF+++ ++ ASE +
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKIL 119
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G V G + A V F+E SAKT + VD+AF+TL REI+K K+
Sbjct: 120 IGNKCDCEDQRQVSFEQGQAL--ADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDA 177
Query: 366 DKKFKGK 386
+ +F +
Sbjct: 178 ENEFSNQ 184
>SPBC1703.10 |ypt1||GTPase Ypt1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 203
Score = 61.7 bits (143), Expect = 1e-10
Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 3/115 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRGA 185
L I DTAGQE + + Y R G ++V+ V SF ++ + + A EG R
Sbjct: 59 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNRLL 118
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G V VV + + A S N+PF+ETSAK V+ AF T+ R+I++
Sbjct: 119 VGNKSDMVDKKVV--EYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKE 171
>SPAC18G6.03 |ypt3||GTPase Ypt3|Schizosaccharomyces pombe|chr
1|||Manual
Length = 214
Score = 50.4 bits (115), Expect = 3e-07
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTCG 200
I DTAGQE Y A+ Y R G L+V+ + SF+++ R + G
Sbjct: 63 IWDTAGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVG 122
Query: 201 QQVRPTVVGRRHGASTRGAQSY----NVPFVETSAKTRMGVDDAFYTLVREI 344
+ T + ST AQ++ N+ F+ETSA V++AF T++ EI
Sbjct: 123 NK---TDLLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEI 171
>SPAC6F6.15 |ypt5||GTPase Ypt5|Schizosaccharomyces pombe|chr
1|||Manual
Length = 211
Score = 43.6 bits (98), Expect = 3e-05
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 4/121 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE---DMARIGADQASEGRGRGA 185
L+I DTAGQE Y ++ Y R ++V+ + A S E + QA EG
Sbjct: 66 LEIWDTAGQERYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQAPEGIVIAL 125
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI-RKDKVS 362
G + + A A++ N+ F ETSAKT V++ F + +++ +DK++
Sbjct: 126 AGNKLDLAQERRAVEKADAEAYAAEA-NLLFFETSAKTAENVNELFTAIAKKLPLEDKLN 184
Query: 363 R 365
+
Sbjct: 185 Q 185
>SPBC428.16c |rhb1||Rheb GTPase Rhb1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 185
Score = 43.2 bits (97), Expect = 4e-05
Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 3/114 (2%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTC 197
+I+DTAGQ+EYS + ++ G++LV+++ S SFE M +I D+ G
Sbjct: 57 EIIDTAGQDEYSILNSKHSIGIHGYVLVYSITSKSSFE-MVKIVRDKILNHTGTEWVPIV 115
Query: 198 GQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
+ + +R + G A + + E SA+ V AF ++ EI K
Sbjct: 116 VVGNKSDLHMQRAVTAEEGKALANEWKCAWTEASARHNENVARAFELIISEIEK 169
>SPBC405.04c |ypt7||GTPase Ypt7|Schizosaccharomyces pombe|chr
2|||Manual
Length = 205
Score = 39.5 bits (88), Expect = 5e-04
Identities = 37/137 (27%), Positives = 64/137 (46%), Gaps = 8/137 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRG- 182
L + DTAGQE + ++ + R + +LV+ VN++KSFE + + QAS
Sbjct: 59 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETF 118
Query: 183 AHGTCGQQV----RPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G +V + +V + + A+ +P+ ETSAK + V +AF T+ + +
Sbjct: 119 PFILLGNKVDVEEQKRMVSKSKALAFCQARG-EIPYFETSAKEAINVQEAFETVAKLALE 177
Query: 351 DKVSRDKKFKGKKPRHV 401
+ S D P H+
Sbjct: 178 NMDSDDIAADFTDPIHL 194
>SPAPB1A10.10c |ypt71||GTPase Ypt71|Schizosaccharomyces pombe|chr
1|||Manual
Length = 208
Score = 39.1 bits (87), Expect = 6e-04
Identities = 34/126 (26%), Positives = 56/126 (44%), Gaps = 8/126 (6%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRGA 185
L + DTAGQE + ++ + R + ++V+ VN++KSF+ + + Q S+
Sbjct: 59 LQLWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDECAFP 118
Query: 186 HGTCGQQVRPTVVGRR---HGA--STRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G Q+ R H A + N+ E SAK V D F T+ R +
Sbjct: 119 FIIVGNQIDKDASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 351 DKVSRD 368
++ SRD
Sbjct: 179 NESSRD 184
>SPAC1B3.11c |ypt4||GTPase Ypt4|Schizosaccharomyces pombe|chr
1|||Manual
Length = 234
Score = 37.9 bits (84), Expect = 0.001
Identities = 17/42 (40%), Positives = 27/42 (64%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMA 140
L I DTAGQE++ ++ Y R G +LV+ V + SFE+++
Sbjct: 64 LQIWDTAGQEKFRSVARNYYRGAAGAVLVYDVTNKDSFEELS 105
>SPAC110.03 |cdc42||Rho family GTPase Cdc42|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 192
Score = 35.9 bits (79), Expect = 0.006
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ F+V S SFE++
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVTSPASFENV 93
>SPAC16A10.04 |rho4||Rho family GTPase Rho4|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 203
Score = 35.9 bits (79), Expect = 0.006
Identities = 38/133 (28%), Positives = 52/133 (39%), Gaps = 13/133 (9%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGR----- 179
L + DTAGQEEY +R LL F+++ S ++ + R
Sbjct: 66 LALWDTAGQEEYDRLRPLSYPNSNVILLCFSIDCPASLNNVTEKWYPEVQHFCPRTPIVL 125
Query: 180 -GAHGTCGQQVRPTVVGRRHGAST---RGAQSY----NVPFVETSAKTRMGVDDAFYTLV 335
G + T V R G + + AQS N P+VE SAK GV++ F V
Sbjct: 126 VGLKADLRKDRNATEVLRTQGLTPVTYQQAQSVALSMNAPYVECSAKENTGVNEVFQLAV 185
Query: 336 REIRKDKVSRDKK 374
K S KK
Sbjct: 186 GLTIKKSFSFSKK 198
>SPAC23C4.08 |rho3||Rho family GTPase Rho3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 205
Score = 33.1 bits (72), Expect = 0.041
Identities = 16/41 (39%), Positives = 23/41 (56%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQEEY +R ++ FAV+S S E++
Sbjct: 63 LSLWDTAGQEEYDQLRSLSYSDTHVIMICFAVDSRDSLENV 103
>SPAC16.01 |rho2||Rho family GTPase Rho2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 32.7 bits (71), Expect = 0.054
Identities = 16/42 (38%), Positives = 24/42 (57%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMA 140
L + DTAGQEEY +R L+ FA++S S E+++
Sbjct: 58 LALWDTAGQEEYERLRPMSYAKAHIILVGFAIDSPDSLENVS 99
>SPBC1289.03c |spi1||Ran GTPase Spi1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 216
Score = 31.5 bits (68), Expect = 0.13
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
++ DTAGQE+ +RD Y G+ +++F V S +++++
Sbjct: 61 NVWDTAGQEKLGGLRDGYYIQGQCGIIMFDVTSRITYKNV 100
>SPAC1F7.04 |rho1||Rho family GTPase Rho1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 202
Score = 30.7 bits (66), Expect = 0.22
Identities = 15/41 (36%), Positives = 23/41 (56%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R L+ FAV+S S +++
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVILICFAVDSPDSLDNV 96
>SPAC4C5.02c |ryh1|hos1|GTPase Ryh1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 201
Score = 29.9 bits (64), Expect = 0.38
Identities = 12/38 (31%), Positives = 22/38 (57%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF 128
L + DTAGQE + ++ Y+R ++V+ + + SF
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAIIVYDITNHNSF 99
>SPCC736.06 |||aspartate-tRNA ligase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 611
Score = 28.7 bits (61), Expect = 0.88
Identities = 19/45 (42%), Positives = 24/45 (53%)
Frame = +1
Query: 193 LVGNKCDLQSWAVDMARAREVRKAIMFRSSKHRPKHAWELTTLST 327
LVG K +Q W V A +R+V K+I F + R H L LST
Sbjct: 13 LVGTKVSIQGWLV--ATSRQVSKSISFH--QLRDTHGTILQLLST 53
>SPAC20H4.11c |rho5||Rho family GTPase Rho5|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 200
Score = 28.7 bits (61), Expect = 0.88
Identities = 13/41 (31%), Positives = 24/41 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R L+ F+V++ +S +++
Sbjct: 56 LALWDTAGQEDYDRLRPLSYPDSHVVLICFSVDAPESLDNV 96
>SPBC17G9.13c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 317
Score = 27.1 bits (57), Expect = 2.7
Identities = 34/105 (32%), Positives = 47/105 (44%), Gaps = 6/105 (5%)
Frame = -1
Query: 321 KRRQLPCVFWP--MFRRTEHYSFAHLSCSRHVYG---PRL*VALVAHKYHGHLFRVLHSL 157
K R LP V + + + + +LSC R Y PR+ V L+ H+YH HL +L +
Sbjct: 184 KIRHLPSVIFDGLIEKNKDRPYHINLSCKR-AYDELLPRIAVPLLPHEYH-HLHSLLLDV 241
Query: 156 DLLRYEPCLRNF*HC-*RRIPARILPRSACIGLSSPNTLPGQPCP 25
L + F R+ RIL RS LS+ LP P P
Sbjct: 242 TLRNPQISRPPFAPLNPRKGFCRILQRSLITFLSAVCYLPYNPHP 286
>SPAC4G9.04c |||cleavage and polyadenylation specificity factor
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 638
Score = 27.1 bits (57), Expect = 2.7
Identities = 16/50 (32%), Positives = 23/50 (46%)
Frame = +3
Query: 159 ASEGRGRGAHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMG 308
A E GR H TC Q+VRP+ +H + Q+ V ++ K G
Sbjct: 542 AVEEEGRIFHATCLQEVRPS--ENKHSNTNTSTQNLAEAAVSSNIKNATG 589
>SPAC1F12.05 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 377
Score = 26.6 bits (56), Expect = 3.6
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
Frame = -2
Query: 407 FVNVTWFLPFEFLVSA--DFIFAYLPHERVESVVNSHACFGRCFDERNIIAL 258
F+NVT+ L + + DF+F Y + + V N+ R F ++IAL
Sbjct: 126 FINVTYILKTRVKIPSQPDFVFEYPLNLKRSIVTNADKIAQRLFPPTSLIAL 177
>SPAC1A6.04c |plb1||phospholipase B homolog Plb1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 613
Score = 26.2 bits (55), Expect = 4.7
Identities = 16/68 (23%), Positives = 32/68 (47%)
Frame = -2
Query: 416 FNYFVNVTWFLPFEFLVSADFIFAYLPHERVESVVNSHACFGRCFDERNIIALRTSRARA 237
+NYF N++ + + D I L + + S V++ FG+CF + RT
Sbjct: 518 YNYFTNISTDRTY---YTEDMIQQLLTNGLISSTVDNDTYFGQCF--ACAVVKRTLERNN 572
Query: 236 MSTAHDCR 213
++ + +C+
Sbjct: 573 ITASPECQ 580
>SPAP8A3.11c |||mitochondrial GTPase Mtg2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 419
Score = 25.8 bits (54), Expect = 6.2
Identities = 14/47 (29%), Positives = 24/47 (51%), Gaps = 4/47 (8%)
Frame = +3
Query: 81 GEGFLLVFAVNSAKSFEDMARIG----ADQASEGRGRGAHGTCGQQV 209
G+G + AV SF +++ + A + G+G HG+CG+ V
Sbjct: 68 GDGGSVYVAVKPG-SFNNLSHLSQIHKASNGTNGKGGNRHGSCGKSV 113
>SPAPB18E9.04c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 800
Score = 25.4 bits (53), Expect = 8.2
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -2
Query: 254 TSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSDTSHVFETFSTVDGEYQQESFP 81
TS R +T S +S+ TSS SF S S+V + STV SFP
Sbjct: 642 TSTNRTSTTFTSSTSISTSSSSTATSSTSFASESSSFYSNVTTSSSTVSTPPPTTSFP 699
>SPCC4E9.01c |rec11|SPCC550.16c|meiotic cohesin complex subunit
Rec11|Schizosaccharomyces pombe|chr 3|||Manual
Length = 923
Score = 25.4 bits (53), Expect = 8.2
Identities = 8/24 (33%), Positives = 14/24 (58%)
Frame = +1
Query: 631 TRKRICCQLCGCVCALASRTSDLS 702
T ICC + C+C + ++ S+ S
Sbjct: 227 TATTICCDIMRCLCLIVNKLSEKS 250
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,082,136
Number of Sequences: 5004
Number of extensions: 64520
Number of successful extensions: 204
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 179
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 197
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 337208592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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