Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00308
(720 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 122 2e-28
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 70 2e-12
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 64 1e-10
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 62 6e-10
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 58 7e-09
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 54 1e-07
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 54 2e-07
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 53 3e-07
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 52 4e-07
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 6e-07
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 50 2e-06
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 48 6e-06
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 46 2e-05
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 46 4e-05
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 45 5e-05
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 45 7e-05
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 45 7e-05
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 44 2e-04
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 43 3e-04
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 42 7e-04
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 41 9e-04
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 40 0.002
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 39 0.004
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 39 0.004
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 39 0.004
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 39 0.005
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 38 0.008
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.008
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.014
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 37 0.019
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 36 0.025
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 36 0.025
SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22) 36 0.033
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 36 0.044
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.058
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 34 0.10
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 34 0.13
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 33 0.23
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 33 0.31
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.31
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.54
SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4) 31 0.94
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 31 0.94
SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.94
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.6
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 30 1.6
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.2
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 29 2.9
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 29 2.9
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.6
SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0) 28 8.8
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
SB_24060| Best HMM Match : GED (HMM E-Value=0.52) 28 8.8
SB_15439| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.8
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 122 bits (295), Expect = 2e-28
Identities = 72/121 (59%), Positives = 83/121 (68%), Gaps = 9/121 (7%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTC 197
DILDTAGQEEYSAMRDQYMRTGEGFL VFAVN++KSFED+ ++ R +
Sbjct: 280 DILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDI--------NQYREQIKRVKD 331
Query: 198 GQQVRPTVVGRR-----HGASTRGAQ----SYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
++V +VG + ST AQ SYN+PF ETSAKTR GVDDAFYTLVREIRK
Sbjct: 332 AEEVPMVLVGNKCDLPQRTVSTSDAQELAKSYNIPFQETSAKTRQGVDDAFYTLVREIRK 391
Query: 351 D 353
D
Sbjct: 392 D 392
Score = 56.8 bits (131), Expect = 2e-08
Identities = 27/39 (69%), Positives = 31/39 (79%)
Frame = +1
Query: 148 EQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVRKA 264
EQIKRVKDAEEVPMVLVGNKCDL V + A+E+ K+
Sbjct: 324 EQIKRVKDAEEVPMVLVGNKCDLPQRTVSTSDAQELAKS 362
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 69.7 bits (163), Expect = 2e-12
Identities = 31/41 (75%), Positives = 37/41 (90%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
LDILDTAGQEE+SAMR+QYMR+GEGFLLVF+V SFE++
Sbjct: 61 LDILDTAGQEEFSAMREQYMRSGEGFLLVFSVTDRSSFEEI 101
Score = 34.3 bits (75), Expect = 0.10
Identities = 17/40 (42%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 151 QIKRVKDAEEVPMVLVGNKCDLQ-SWAVDMARAREVRKAI 267
QI RVKD E PM++ GNK DL+ V A +E+ + +
Sbjct: 107 QILRVKDRTEFPMIICGNKSDLEYERTVSTAEGQELARQL 146
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 64.1 bits (149), Expect = 1e-10
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 3/106 (2%)
Frame = +3
Query: 57 MRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTCGQQVRPTVVGRRH 236
MR+QYMR GEGF++++++ SF ++A DQ R + + G+R
Sbjct: 1 MREQYMRNGEGFIIIYSITDRSSF-NLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKRE 59
Query: 237 GASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
+ G A ++ PF ETSA R VDDAF+ LVREIRK + R
Sbjct: 60 VTTQEGQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKKEKQR 105
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 61.7 bits (143), Expect = 6e-10
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 3/113 (2%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTC 197
D TAG E++++MRD Y++ G+GFLLV+++ + ++F D+ + A Q +G
Sbjct: 38 DFYHTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRA-QILRVKGSENVPIV 96
Query: 198 GQQVRPTVVGRRH---GASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIR 347
+ + R G + A+++ PF ETSAKTR VD F +VR ++
Sbjct: 97 LVGNKSDIYDEREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRMK 149
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 58.0 bits (134), Expect = 7e-09
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 7/134 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGA---DQASEGRGRGA 185
L I DTAGQE + + Y R G +LV+ V + KSF ++++ D A+E R
Sbjct: 7 LQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANEDVKRML 66
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK----D 353
G V+ + G A SY + F+ETSA + + V+ +F L +I
Sbjct: 67 VGNKCDMYDKRVISQTKGEQL--ASSYGISFIETSALSNINVEKSFVVLTEDILNAVCPP 124
Query: 354 KVSRDKKFKGKKPR 395
V +K KGKK +
Sbjct: 125 TVEETEKGKGKKKK 138
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 54.0 bits (124), Expect = 1e-07
Identities = 20/41 (48%), Positives = 34/41 (82%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
++++DTAGQEEY++ RD + TG+ FL++FA+NSA S+ ++
Sbjct: 2635 IEVVDTAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNEL 2675
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 53.6 bits (123), Expect = 2e-07
Identities = 32/113 (28%), Positives = 58/113 (51%), Gaps = 2/113 (1%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + + Y R+ G +L++ VN +++F +++ ++ SE G +
Sbjct: 59 LQIWDTAGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQ-WLEEVSEYACEGVNTI 117
Query: 195 CGQQVRPTVVGRRHGAST--RGAQSYNVPFVETSAKTRMGVDDAFYTLVREIR 347
+ R+ G +T A+ ++ F+ETSAK V+ F T+ E++
Sbjct: 118 LVGNKCDLIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELK 170
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 52.8 bits (121), Expect = 3e-07
Identities = 20/42 (47%), Positives = 36/42 (85%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
+L+ILDTAG E++++MRD Y++ G+GFLLV+++ + ++F D+
Sbjct: 52 ILEILDTAGTEQFASMRDLYIKNGQGFLLVYSLINRQTFADL 93
Score = 33.9 bits (74), Expect = 0.13
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 151 QIKRVKDAEEVPMVLVGNKCDL 216
QI RVK +E VP+VLVGNK D+
Sbjct: 99 QILRVKGSENVPIVLVGNKSDI 120
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 52.4 bits (120), Expect = 4e-07
Identities = 19/41 (46%), Positives = 34/41 (82%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
++++D+AGQEEY++ RD + TG+ FL++FA+NSA S+ ++
Sbjct: 25 IEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNEL 65
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 51.6 bits (118), Expect = 6e-07
Identities = 36/114 (31%), Positives = 53/114 (46%), Gaps = 3/114 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRGA 185
L I DTAGQE + + Y R G ++V+ V +SF ++ + + A E +
Sbjct: 80 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYACENVNKLL 139
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIR 347
G VV + A+S VPF+ETSAK V+ AF T+ EI+
Sbjct: 140 VGNKCDLTTKKVVD--FTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIK 191
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 130 KTWLVSEQIKRVKDAEEVPMVLVGNKCDLQS-WAVDMARAREVRKAI 267
K WL ++I R E V +LVGNKCDL + VD A+E +++
Sbjct: 121 KQWL--QEIDRYA-CENVNKLLVGNKCDLTTKKVVDFTTAKEYAESL 164
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 50.0 bits (114), Expect = 2e-06
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 5/115 (4%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD--QASEGRGRGAH 188
L I DTAGQE + ++R + R + LLV+AV+ AKSF +++ + ++ R +
Sbjct: 262 LQIWDTAGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNF 321
Query: 189 GTCGQQVRPTVVGR---RHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
+ V GR + A + Q+ VP+ ETSAK V+DAF V+ +
Sbjct: 322 PFILLGNKVDVEGRAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRL 376
Score = 28.3 bits (60), Expect = 6.6
Identities = 11/28 (39%), Positives = 17/28 (60%)
Frame = +1
Query: 163 VKDAEEVPMVLVGNKCDLQSWAVDMARA 246
V+D + P +L+GNK D++ AV A
Sbjct: 315 VRDQDNFPFILLGNKVDVEGRAVSQEEA 342
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 48.4 bits (110), Expect = 6e-06
Identities = 32/112 (28%), Positives = 55/112 (49%), Gaps = 6/112 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR--IGADQ-ASEGRGR-- 179
+ + DTAGQE + ++ QY R +G L+ + V + SF ++ + + ++ A EG +
Sbjct: 947 IQLWDTAGQERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMV 1006
Query: 180 -GAHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTL 332
G + VV G + A Y+ ++ETSAKT + +A Y L
Sbjct: 1007 LGNKTDLAEDEESRVVKTIDGKNL--ANQYDALYMETSAKTGNNIQEAMYKL 1056
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 46.4 bits (105), Expect = 2e-05
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 4/115 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD---QASEGRGRGA 185
L I DTAGQE + + Y R+ G ++ + + +F+++ R G D A E +
Sbjct: 97 LQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENAIKLL 156
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYN-VPFVETSAKTRMGVDDAFYTLVREIR 347
G R V + A Y + +ETSAK ++ AFY L RE++
Sbjct: 157 VGNKKDLEREREVSLEDAVNC--ASHYGMLDVLETSAKDATNIEAAFYRLARELK 209
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 45.6 bits (103), Expect = 4e-05
Identities = 32/114 (28%), Positives = 61/114 (53%), Gaps = 4/114 (3%)
Frame = +3
Query: 84 EGFLLVFAVNSAKSFEDMA---RIGADQASEGRGRGAHGT-CGQQVRPTVVGRRHGASTR 251
EG +LV+ + K+F++++ R + A+E + G C R +V R G
Sbjct: 126 EGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDR-RIVSRERGEQI- 183
Query: 252 GAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDKKFKGKKPRHVHKII 413
A+ + + F+ETSAKT + ++ AF L ++I K ++++D + + ++H II
Sbjct: 184 -AREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSE---EPSNNIHGII 233
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 45.2 bits (102), Expect = 5e-05
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 2/119 (1%)
Frame = +3
Query: 33 AGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTC-GQQV 209
AGQE + + Y R G ++V+ + +S+ ++ + + G H G ++
Sbjct: 376 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHK-WLMEVETYASEGVHMILVGNKI 434
Query: 210 R-PTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDKKFKG 383
T + A+ A +++PFVETSAK V +AF L R + K S + + KG
Sbjct: 435 DLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFLVLSRLLTKHIASNEARRKG 493
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 44.8 bits (101), Expect = 7e-05
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG- 191
L + DTAG+E+Y A+ + R +G LLVF V+ +SF+ + + + G
Sbjct: 61 LQLWDTAGEEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITI 120
Query: 192 TCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G + + YN+ ++ETSAK V++AF + R++
Sbjct: 121 LVGNKCDKKDKKVSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKL 171
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 44.8 bits (101), Expect = 7e-05
Identities = 37/136 (27%), Positives = 61/136 (44%), Gaps = 3/136 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE---DMARIGADQASEGRGRGA 185
L I DTAGQE + + Y+R E L+VF + + SFE D ++ D+ E
Sbjct: 214 LQIWDTAGQERFRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIII 273
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G + V + + + A+ + +VETSAK+ V F L +++ +R
Sbjct: 274 VGNKMDESDRRKVS--YDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDLYLYHFTR 331
Query: 366 DKKFKGKKPRHVHKII 413
K K ++ +II
Sbjct: 332 YLKMKEERRHEGEQII 347
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 43.6 bits (98), Expect = 2e-04
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAH-G 191
L + DTAGQE + ++ Y R +G LL++ V SF D+ R + E +
Sbjct: 493 LQLWDTAGQERFRSIAKSYFRKADGVLLLYDVTCETSFLDV-RDWVEAIEESCSKPVPIM 551
Query: 192 TCGQQV---------RPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
CG ++ TV+ G +R A+ + F+ETS+K + +A L R +
Sbjct: 552 LCGNKIDIRQSAAAENKTVITAESG--SRLAKEHGALFIETSSKENKNIAEACIELARML 609
Query: 345 RKDKVSRDKKFKGKK 389
R + K+ G K
Sbjct: 610 RDVEDIEVKQNNGMK 624
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 43.6 bits (98), Expect = 2e-04
Identities = 32/116 (27%), Positives = 57/116 (49%), Gaps = 6/116 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM------ARIGADQASEGRG 176
L I DTAGQE + ++ Y R G L+++ + + SF ++ A+ ++A
Sbjct: 65 LQIWDTAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFM 124
Query: 177 RGAHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
H + R VV G A+++N+ F+ETSAK +++AF ++ E+
Sbjct: 125 LVGHKIDKESKR--VVSTEEGECF--AEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/116 (27%), Positives = 53/116 (45%), Gaps = 3/116 (2%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGAH 188
+I DTAGQE Y ++ Y R + ++V+ + + +F + + QAS
Sbjct: 73 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALS 132
Query: 189 GTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDK 356
G +V S A+ + F+ETSAKT M V+D F + ++ +K K
Sbjct: 133 GNKADLASKRMVEYEDAQSY--AEDNGLLFMETSAKTAMNVNDIFLAIGKKGKKKK 186
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 41.5 bits (93), Expect = 7e-04
Identities = 34/135 (25%), Positives = 59/135 (43%), Gaps = 10/135 (7%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGR-GAHG 191
L I+DT+G E+ AMR + G+ F+LV++ + +SF + R ++ G+ R
Sbjct: 78 LQIIDTSGTYEFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIV 137
Query: 192 TCGQQVRPTVV---------GRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
C + P G R A + +++ SAK V+D F L+ E+
Sbjct: 138 VCNKNDLPLATHLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEM 197
Query: 345 RKDKVSRDKKFKGKK 389
++ K D +K
Sbjct: 198 KRAKHKVDTPGMSRK 212
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 41.1 bits (92), Expect = 9e-04
Identities = 18/36 (50%), Positives = 25/36 (69%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAK 122
L+++DTAGQ+EYS Y G++LV+AV SAK
Sbjct: 56 LELVDTAGQDEYSIFPQSYSMGIHGYILVYAVTSAK 91
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 39.9 bits (89), Expect = 0.002
Identities = 34/129 (26%), Positives = 58/129 (44%), Gaps = 6/129 (4%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + ++ Y R G LLV+ ++S ++F + D +
Sbjct: 146 LQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIIL 205
Query: 195 CGQQVRPTVVGRR--HGASTRGAQSYNVPFVETSAKTRMGVDDAFY----TLVREIRKDK 356
G + + R ++R AQ + F+ETSA T V++ F T++ +I +
Sbjct: 206 VGNK-KDLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCSRTILNKIESGE 264
Query: 357 VSRDKKFKG 383
+ D+ G
Sbjct: 265 LDPDRMGSG 273
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/44 (38%), Positives = 31/44 (70%), Gaps = 1/44 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSA-MRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
L+ILDTA + + S +RDQ++R G+GF++V++ +F ++ R
Sbjct: 55 LEILDTASRGQNSCKLRDQFVREGDGFIVVYSTADRSTFANLHR 98
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 39.1 bits (87), Expect = 0.004
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
+ DTAGQE Y A+ Y R G +LV+ + K+F+D+ R
Sbjct: 65 VWDTAGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVER 105
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 39.1 bits (87), Expect = 0.004
Identities = 28/111 (25%), Positives = 50/111 (45%), Gaps = 5/111 (4%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTCG 200
I DTAGQE + ++ + R + +LVF V SF+ + + + R
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 201 QQVRPTVVGRRHGASTRGAQSY-----NVPFVETSAKTRMGVDDAFYTLVR 338
+ + S + AQ++ ++P+ ETSAK + V+ AF T+ +
Sbjct: 61 VVLGNKIDLENRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAK 111
Score = 30.7 bits (66), Expect = 1.2
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = +1
Query: 166 KDAEEVPMVLVGNKCDLQSWAVDMARAR 249
+D E P V++GNK DL++ AV RA+
Sbjct: 53 RDPENFPFVVLGNKIDLENRAVSAKRAQ 80
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 38.7 bits (86), Expect = 0.005
Identities = 42/136 (30%), Positives = 58/136 (42%), Gaps = 10/136 (7%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
LDILDTAG E S Y+ G+GF++V+++ S+E MAR ++ R
Sbjct: 17 LDILDTAGNGEAS-----YIHNGDGFVVVYSITDYYSYE-MARQLVKLVTQ--VRKTDDI 68
Query: 195 CGQQVRPTVVGR----RHG------ASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
C Q+ +VG R G + A Y ETSA T V FY + +
Sbjct: 69 C--QIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFYNMAFQT 126
Query: 345 RKDKVSRDKKFKGKKP 392
R K S + K P
Sbjct: 127 RFTKASNRETRKNNCP 142
Score = 29.1 bits (62), Expect = 3.8
Identities = 11/23 (47%), Positives = 18/23 (78%)
Frame = +1
Query: 151 QIKRVKDAEEVPMVLVGNKCDLQ 219
Q+++ D ++P+VLVGNK DL+
Sbjct: 61 QVRKTDDICQIPIVLVGNKRDLR 83
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/39 (41%), Positives = 24/39 (61%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE 131
L I DTAGQE Y + Y R GF+L++ + + +SF+
Sbjct: 72 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFQ 110
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 37.9 bits (84), Expect = 0.008
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L I DTAGQE + + Y R +G +LV+ NS ++F+ +
Sbjct: 59 LAIWDTAGQERFRTLTPSYYRGAQGVILVYDTNSRETFDKL 99
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 37.1 bits (82), Expect = 0.014
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L I DTAGQE + ++ Y +G ++ + + + KSFE +
Sbjct: 58 LQIWDTAGQERFRSITQSYYHNADGVIVTYDITNKKSFESL 98
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 36.7 bits (81), Expect = 0.019
Identities = 17/42 (40%), Positives = 25/42 (59%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARI 146
I+DTAG + MR + T + F++VFA+NS SF + I
Sbjct: 64 IVDTAGTYAFPVMRRLAIHTCQAFIVVFAINSESSFREAFEI 105
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 36.3 bits (80), Expect = 0.025
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF 128
L + DTAGQE + ++ + R GFLLVF + +SF
Sbjct: 168 LQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSF 205
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 36.3 bits (80), Expect = 0.025
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
L I DTAGQE + + Y R G ++V+ V SA +F ++ R
Sbjct: 28 LQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNVKR 70
>SB_57110| Best HMM Match : 7tm_1 (HMM E-Value=4.9e-22)
Length = 559
Score = 35.9 bits (79), Expect = 0.033
Identities = 12/27 (44%), Positives = 21/27 (77%)
Frame = +3
Query: 57 MRDQYMRTGEGFLLVFAVNSAKSFEDM 137
MRD YM+ G+GF+LV+++ + +F D+
Sbjct: 1 MRDLYMKNGQGFVLVYSITAQSTFNDL 27
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 35.5 bits (78), Expect = 0.044
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMA 140
+++ DTAGQE++ A+R + + F++ F+V S SF ++A
Sbjct: 67 MIEFCDTAGQEDFDALRPLCYSSADVFIVCFSVVSPTSFANVA 109
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 35.1 bits (77), Expect = 0.058
Identities = 17/41 (41%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ F+V S SFE++
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVSPSSFENV 93
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 34.3 bits (75), Expect = 0.10
Identities = 15/45 (33%), Positives = 30/45 (66%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIG 149
+++ DTAG E A ++ + GE F++++++ S SF++ +RIG
Sbjct: 911 IELTDTAG-ENSPAKLERCLEIGEVFVVLYSITSRHSFDEASRIG 954
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 33.9 bits (74), Expect = 0.13
Identities = 13/40 (32%), Positives = 27/40 (67%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
++ DTAGQE++ +RD Y G+ +++F V S +++++
Sbjct: 84 NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNV 123
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 33.1 bits (72), Expect = 0.23
Identities = 13/40 (32%), Positives = 26/40 (65%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFED 134
L+I+DTAG + AM+ ++ + F+LV++V+ S ++
Sbjct: 158 LEIMDTAGSYPFPAMKKLTIQNADAFVLVYSVDEKASLQE 197
Score = 29.9 bits (64), Expect = 2.2
Identities = 18/54 (33%), Positives = 28/54 (51%)
Frame = +1
Query: 100 YSPSTVLKVSKTWLVSEQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVRK 261
YS + + + +I +K + VPMVLVGNK DL S + + ++RK
Sbjct: 187 YSVDEKASLQEALELQREIVYIK-GKTVPMVLVGNKTDLVSEELRQSTRAQMRK 239
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/111 (26%), Positives = 46/111 (41%), Gaps = 3/111 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR-IGADQASEGRGRGAHG 191
L I DTAGQE Y ++ Y R +G LVF + +F + R I + + G
Sbjct: 403 LTIGDTAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQL 462
Query: 192 TCGQQVRPTVVGR--RHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVR 338
+ R + + A P++ETSAK + D F +++
Sbjct: 463 ILVGNKKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMFKKMLQ 513
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 32.7 bits (71), Expect = 0.31
Identities = 29/106 (27%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Frame = +3
Query: 57 MRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGA------HGTCGQQV--R 212
+R+++ + +G LLV+ V S +SFE + I D+ + G + C +V R
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEAL-DIWLDEIKKDIGSPSDFNSVVFVVCANKVDSR 64
Query: 213 PTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
+V G + A+++ + ETSA+T G+ + F TL + K
Sbjct: 65 KRLVEESEG--RQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVVK 108
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/40 (45%), Positives = 22/40 (55%)
Frame = +3
Query: 219 VVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVR 338
VV H T +NV F+ETSAKT + VD AF + R
Sbjct: 137 VVSHMHIIETH--MDHNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 32.3 bits (70), Expect = 0.41
Identities = 15/37 (40%), Positives = 22/37 (59%)
Frame = +3
Query: 27 DTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
DTAGQE+Y +R + FL+ F + S SFE++
Sbjct: 59 DTAGQEDYDRLRPLSYPMTDVFLVCFDIGSRTSFENI 95
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 31.9 bits (69), Expect = 0.54
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF 128
L DTAGQE++ + Y R + +LVF + + +F
Sbjct: 62 LQCWDTAGQEKFRGITQSYYRNADAVILVFDITNRGTF 99
>SB_26867| Best HMM Match : Acyltransferase (HMM E-Value=4.4)
Length = 655
Score = 31.1 bits (67), Expect = 0.94
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 2/89 (2%)
Frame = -2
Query: 275 RNIIALRTSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSDTSHVFETFSTVDGEYQ 96
RN++ T+R R R H ST GT S ++ + + + T + + Q
Sbjct: 319 RNLLTSTTTRTRIQQEPCQIRIHTYSHST-GTFSDQHPHVLRFNRNLLRSTSTRT--QIQ 375
Query: 95 QESF--PGPHVLVSHRRILFLASRVQDVE 15
QE+F P PHVL +R +L S +E
Sbjct: 376 QETFSDPHPHVLTFNRNLLKSTSTRTHIE 404
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/38 (42%), Positives = 23/38 (60%)
Frame = +3
Query: 219 VVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTL 332
VVG+ G + Q N F+ETSAK ++ V++ FY L
Sbjct: 15 VVGKDQGQNL-AKQFANCTFLETSAKAKINVNEIFYDL 51
>SB_7780| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1309
Score = 31.1 bits (67), Expect = 0.94
Identities = 16/31 (51%), Positives = 18/31 (58%)
Frame = +3
Query: 267 NVPFVETSAKTRMGVDDAFYTLVREIRKDKV 359
NVP VETS + VD AF L + I K KV
Sbjct: 222 NVPIVETSTYQNVNVDLAFVVLAQLIEKGKV 252
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + L+ F+++S S E++
Sbjct: 5979 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI 6019
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/40 (35%), Positives = 23/40 (57%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE 131
LLD+ DT G EY +R + + LL F +++ ++FE
Sbjct: 53 LLDLWDTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFE 92
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 29.9 bits (64), Expect = 2.2
Identities = 14/47 (29%), Positives = 24/47 (51%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGAD 155
L +LDT+G EEY + Y++ + + FA+N S + + D
Sbjct: 65 LYLLDTSGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNND 111
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 29.5 bits (63), Expect = 2.9
Identities = 12/40 (30%), Positives = 21/40 (52%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
+I DTAGQE + ++ Y R +LV+ + +F +
Sbjct: 12 NIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSL 51
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/48 (37%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Frame = +3
Query: 240 ASTRG-AQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDKKFK 380
A RG A+ +PF ETSA+ + V D F LV I +++ + + FK
Sbjct: 29 AEGRGLAKELGLPFFETSAEKNINVTDCFEALVDSI-LEEIKQKEIFK 75
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 29.1 bits (62), Expect = 3.8
Identities = 12/28 (42%), Positives = 19/28 (67%)
Frame = +1
Query: 133 TWLVSEQIKRVKDAEEVPMVLVGNKCDL 216
TW+V + + + +VP +L+GNKCDL
Sbjct: 140 TWIV--EYRHHAYSGDVPKILIGNKCDL 165
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 28.3 bits (60), Expect = 6.6
Identities = 13/31 (41%), Positives = 20/31 (64%)
Frame = +3
Query: 267 NVPFVETSAKTRMGVDDAFYTLVREIRKDKV 359
N+P+VE SAK G++D T + EI +D +
Sbjct: 155 NIPYVENSAKELKGLEDVLMTGI-EIGRDYI 184
>SB_32960| Best HMM Match : Ribonuc_red_sm (HMM E-Value=0)
Length = 991
Score = 27.9 bits (59), Expect = 8.8
Identities = 17/48 (35%), Positives = 22/48 (45%)
Frame = -2
Query: 305 HACFGRCFDERNIIALRTSRARAMSTAHDCRSHLLPTSTMGTSSASFT 162
HA + FD R+ +ALR +RA STA + L SFT
Sbjct: 567 HAIAEQVFDPRSKVALRRARAPVESTASEITPLLTQLEIHVAEDKSFT 614
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFED 134
LDI+DTAG+ M + E F +V++V SF++
Sbjct: 17 LDIMDTAGKNSVEKM-STCLTFAELFFIVYSVTDRTSFDE 55
>SB_46937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 669
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/56 (25%), Positives = 26/56 (46%)
Frame = +3
Query: 243 STRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSRDKKFKGKKPRHVHKI 410
+T A N + + TR +A T E+R D + + + +G++ R HK+
Sbjct: 391 NTEKAAQSNTELLTSKLSTRTQEVNALRTENEELRADIAAMEDRLRGEEERMAHKV 446
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 27.9 bits (59), Expect = 8.8
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE 131
L I DTA S Y+ EGF++V+++N ++FE
Sbjct: 177 LHITDTA-----STYEPVYLSQNEGFIVVYSINELRTFE 210
>SB_24060| Best HMM Match : GED (HMM E-Value=0.52)
Length = 297
Score = 27.9 bits (59), Expect = 8.8
Identities = 18/65 (27%), Positives = 29/65 (44%)
Frame = +1
Query: 100 YSPSTVLKVSKTWLVSEQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVRKAIMFRS 279
YSP LK ++ E+ K++ + VP+ L N Q A + R + K I+F
Sbjct: 27 YSPQDKLKFTENVWKPEEFKKMMRTDAVPINLQLNNIVQQQIARNRENLRSLFKTIIFCG 86
Query: 280 SKHRP 294
+ P
Sbjct: 87 KNNIP 91
>SB_15439| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 8.8
Identities = 11/19 (57%), Positives = 14/19 (73%), Gaps = 2/19 (10%)
Frame = +3
Query: 186 HGTCGQQVRPTVVG--RRH 236
HGTCG Q +P ++G RRH
Sbjct: 3 HGTCGSQAQPDMLGFLRRH 21
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 24,001,873
Number of Sequences: 59808
Number of extensions: 513459
Number of successful extensions: 1435
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 1257
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1416
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1913853903
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -