Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00308
(720 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical pr... 124 8e-29
M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein pro... 124 8e-29
U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding pro... 85 6e-17
U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog ... 85 6e-17
CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical ... 85 6e-17
Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical pr... 79 4e-15
U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding pro... 79 4e-15
AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-rela... 74 9e-14
Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical pr... 74 1e-13
CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical ... 66 2e-11
Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical p... 66 2e-11
U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family prot... 62 5e-10
AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family pr... 61 7e-10
AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein. 61 7e-10
AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family pr... 57 1e-08
AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein. 57 1e-08
Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical p... 57 1e-08
AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical ... 52 5e-07
AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family pr... 49 3e-06
U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated p... 47 1e-05
Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical pr... 45 6e-05
U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily ass... 43 2e-04
AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family pr... 43 2e-04
Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical pr... 43 3e-04
Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like prot... 42 3e-04
AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical... 42 3e-04
U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical pr... 41 8e-04
Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical pr... 41 0.001
U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein. 41 0.001
U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein. 41 0.001
U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family pro... 41 0.001
U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family pro... 41 0.001
AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein. 41 0.001
U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical pr... 40 0.002
Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical pr... 40 0.002
U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family prot... 40 0.002
AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical ... 40 0.002
AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical ... 40 0.002
AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein. 40 0.002
Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical pr... 38 0.010
U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein. 38 0.010
AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family pr... 38 0.010
AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family pr... 37 0.017
X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-relat... 36 0.022
L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.022
L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein pr... 36 0.022
AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse e... 36 0.022
AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death a... 36 0.022
Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical pr... 36 0.038
U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like prot... 36 0.038
Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical pr... 35 0.051
Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical pr... 35 0.051
U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase... 35 0.051
U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein. 35 0.051
U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical p... 33 0.16
S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog p... 33 0.16
L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleot... 33 0.16
AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical ... 33 0.16
AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical ... 33 0.16
U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific ... 32 0.47
AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical ... 31 0.63
L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleot... 30 1.4
AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical ... 30 1.4
AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical ... 30 1.4
U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey... 30 1.9
AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical ... 29 3.3
Z83744-3|CAE17679.1| 158|Caenorhabditis elegans Hypothetical pr... 28 5.8
Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical pr... 28 5.8
AF039050-4|AAC47937.1| 499|Caenorhabditis elegans Cytochrome p4... 28 5.8
U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical pr... 28 7.7
>Z68302-3|CAA92630.1| 184|Caenorhabditis elegans Hypothetical
protein ZK792.6 protein.
Length = 184
Score = 124 bits (298), Expect = 8e-29
Identities = 74/137 (54%), Positives = 87/137 (63%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG 191
LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVN AKSFE++A +Q +
Sbjct: 52 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANY-REQIRRVKD----- 105
Query: 192 TCGQQVRPTVVGRRHGASTRG---------AQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
V +VG + S+R A+ Y +P V+TSAKTRMGVD+AFYTLVREI
Sbjct: 106 --SDDVPMVLVGNKCDLSSRSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREI 163
Query: 345 RKDKVSRDKKFKGKKPR 395
RK + D KK +
Sbjct: 164 RKHRERHDNNKPQKKKK 180
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 148 EQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVRK 261
EQI+RVKD+++VPMVLVGNKCDL S +VD E K
Sbjct: 98 EQIRRVKDSDDVPMVLVGNKCDLSSRSVDFRTVSETAK 135
>M55535-1|AAA28103.1| 187|Caenorhabditis elegans ras protein
protein.
Length = 187
Score = 124 bits (298), Expect = 8e-29
Identities = 74/137 (54%), Positives = 87/137 (63%), Gaps = 9/137 (6%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG 191
LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVN AKSFE++A +Q +
Sbjct: 55 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNEAKSFENVANY-REQIRRVKD----- 108
Query: 192 TCGQQVRPTVVGRRHGASTRG---------AQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
V +VG + S+R A+ Y +P V+TSAKTRMGVD+AFYTLVREI
Sbjct: 109 --SDDVPMVLVGNKCDLSSRSVDFRTVSETAKGYGIPNVDTSAKTRMGVDEAFYTLVREI 166
Query: 345 RKDKVSRDKKFKGKKPR 395
RK + D KK +
Sbjct: 167 RKHRERHDNNKPQKKKK 183
Score = 53.6 bits (123), Expect = 1e-07
Identities = 24/38 (63%), Positives = 29/38 (76%)
Frame = +1
Query: 148 EQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARAREVRK 261
EQI+RVKD+++VPMVLVGNKCDL S +VD E K
Sbjct: 101 EQIRRVKDSDDVPMVLVGNKCDLSSRSVDFRTVSETAK 138
>U56933-1|AAB66712.1| 212|Caenorhabditis elegans GTP binding
protein protein.
Length = 212
Score = 84.6 bits (200), Expect = 6e-17
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L+ILDTAGQEE+S MR+QY+RTG GFL+VFAV SFE++ ++ + + R
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKL-HELICRIKDRDDFPI 125
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
+ + RH A A ++P++E SAK R VD+AF+ +VR +RK
Sbjct: 126 ILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>U56930-1|AAB03320.1| 212|Caenorhabditis elegans R-ras1 homolog
protein.
Length = 212
Score = 84.6 bits (200), Expect = 6e-17
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L+ILDTAGQEE+S MR+QY+RTG GFL+VFAV SFE++ ++ + + R
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKL-HELICRIKDRDDFPI 125
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
+ + RH A A ++P++E SAK R VD+AF+ +VR +RK
Sbjct: 126 ILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>CU457742-1|CAM36362.1| 212|Caenorhabditis elegans Hypothetical
protein C44C11.1a protein.
Length = 212
Score = 84.6 bits (200), Expect = 6e-17
Identities = 47/115 (40%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L+ILDTAGQEE+S MR+QY+RTG GFL+VFAV SFE++ ++ + + R
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKL-HELICRIKDRDDFPI 125
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
+ + RH A A ++P++E SAK R VD+AF+ +VR +RK
Sbjct: 126 ILVGNKADLENERHVARHEAEELAHRLSIPYLECSAKIRKNVDEAFFDIVRLVRK 180
>Z35719-7|CAA84796.1| 211|Caenorhabditis elegans Hypothetical
protein F17C8.4 protein.
Length = 211
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG 191
++D+LDTAGQEE+SAMR+QY+R G GFLLVF+V KSFE+ ++ +Q + R +
Sbjct: 66 IMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKL-YNQVLRVKDRSEYP 124
Query: 192 TCGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAK-TRMGVDDAFYTLVREIR 347
+ ++ +R + G A + ++ETSAK + VD AF+ LVR +R
Sbjct: 125 VLLVANKVDLINQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELVRIVR 180
>U80675-1|AAB38969.1| 211|Caenorhabditis elegans GTP binding
protein protein.
Length = 211
Score = 78.6 bits (185), Expect = 4e-15
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 4/116 (3%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG 191
++D+LDTAGQEE+SAMR+QY+R G GFLLVF+V KSFE+ ++ +Q + R +
Sbjct: 66 IMDVLDTAGQEEFSAMREQYIRGGRGFLLVFSVTERKSFEEAHKL-YNQVLRVKDRSEYP 124
Query: 192 TCGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAK-TRMGVDDAFYTLVREIR 347
+ ++ +R + G A + ++ETSAK + VD AF+ LVR +R
Sbjct: 125 VLLVANKVDLINQRVVSEQEGRELAAQLKLMYIETSAKEPPVNVDAAFHELVRIVR 180
>AC024809-6|AAF59545.1| 213|Caenorhabditis elegans Ral (ras-related
gtpase) homologprotein 1 protein.
Length = 213
Score = 74.1 bits (174), Expect = 9e-14
Identities = 46/120 (38%), Positives = 65/120 (54%), Gaps = 6/120 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAH-- 188
+DILDTAGQE+YSA+RD Y R+GEGF+ VF++ +SFE +Q + +
Sbjct: 67 IDILDTAGQEDYSAIRDNYYRSGEGFICVFSILDMESFEATNEF-REQILRVKNSDSSVP 125
Query: 189 ----GTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDK 356
G G VV + A+ + +VETSAK R VD FY L+RE+++ K
Sbjct: 126 IVLVGNKGDMRDQRVVSAE--LCRQRAEQWGCHYVETSAKRRENVDKVFYDLMREMKRRK 183
Score = 31.1 bits (67), Expect = 0.83
Identities = 16/29 (55%), Positives = 22/29 (75%), Gaps = 1/29 (3%)
Frame = +1
Query: 148 EQIKRVKDAEE-VPMVLVGNKCDLQSWAV 231
EQI RVK+++ VP+VLVGNK D++ V
Sbjct: 112 EQILRVKNSDSSVPIVLVGNKGDMRDQRV 140
>Z54236-8|CAA90983.1| 188|Caenorhabditis elegans Hypothetical
protein C27B7.8 protein.
Length = 188
Score = 73.7 bits (173), Expect = 1e-13
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRG--- 182
+L+ILDTAG E+++AMRD YM+ G+GF+LV+++ + +F D+ + DQ +
Sbjct: 52 MLEILDTAGTEQFTAMRDLYMKNGQGFVLVYSITAQSTFNDLMDL-RDQILRVKDTDEVP 110
Query: 183 --AHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G VVG+ G + A+ + F+ETSAK ++ V + FY LVR+I +
Sbjct: 111 MILVGNKCDLEDERVVGKDQGQNL--ARQFGSAFLETSAKAKINVSEVFYDLVRQINR 166
Score = 44.8 bits (101), Expect = 6e-05
Identities = 18/24 (75%), Positives = 22/24 (91%)
Frame = +1
Query: 148 EQIKRVKDAEEVPMVLVGNKCDLQ 219
+QI RVKD +EVPM+LVGNKCDL+
Sbjct: 98 DQILRVKDTDEVPMILVGNKCDLE 121
>CU457742-2|CAM36363.1| 168|Caenorhabditis elegans Hypothetical
protein C44C11.1b protein.
Length = 168
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/44 (63%), Positives = 37/44 (84%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARI 146
L+ILDTAGQEE+S MR+QY+RTG GFL+VFAV SFE++ ++
Sbjct: 67 LEILDTAGQEEFSTMREQYLRTGSGFLIVFAVTDRNSFEEVKKL 110
Score = 33.9 bits (74), Expect = 0.12
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 148 EQIKRVKDAEEVPMVLVGNKCDLQS 222
E I R+KD ++ P++LVGNK DL++
Sbjct: 112 ELICRIKDRDDFPIILVGNKADLEN 136
>Z81039-10|CAB02777.2| 181|Caenorhabditis elegans Hypothetical
protein C25D7.7 protein.
Length = 181
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHG 191
+L+ILDTAG E++S+MRD Y++ G+GF++V+++ S ++F D+ + +Q +G
Sbjct: 52 VLEILDTAGTEQFSSMRDLYIKNGQGFVVVYSITSQQTFHDIRNM-KEQIVRVKGSENVP 110
Query: 192 TCGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
+ + +R S G A+S++ PF E SAK V+ F +VRE+
Sbjct: 111 ILLVGNKCDLSHQRQVRSEEGLALAESWSCPFTECSAKNNQNVNVTFAEIVREM 164
>U80033-5|AAC48200.1| 201|Caenorhabditis elegans Rab family protein
10 protein.
Length = 201
Score = 61.7 bits (143), Expect = 5e-10
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMA---RIGADQASEGRGRGA 185
L I DTAGQE + + Y R G +LV+ + +AKSF+++A R + ASE +
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAKWLRNIDEHASEDVVKMI 119
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G VV R G AQ + + F ETSAK + VD AFY L I
Sbjct: 120 LGNKCDMSDRRVVSRERGEKI--AQDHGISFHETSAKLNVHVDTAFYDLAEAI 170
>AF106592-3|AAK21367.2| 211|Caenorhabditis elegans Rab family
protein 8 protein.
Length = 211
Score = 61.3 bits (142), Expect = 7e-10
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + + Y R G +LV+ + + +SFE++ +
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMI 118
Query: 195 CGQQVRPTVVGRRHGASTRGAQ---SYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G + + RR + RG Q Y F+ETSAK + +D+AF+TL R+I K K+ +
Sbjct: 119 IGNKC--DIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI-KSKMEQ 175
Query: 366 DKKFKG 383
++ G
Sbjct: 176 NEMRAG 181
>AB112929-1|BAD07034.1| 211|Caenorhabditis elegans Rab8 protein.
Length = 211
Score = 61.3 bits (142), Expect = 7e-10
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 3/126 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + + Y R G +LV+ + + +SFE++ +
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKNWIRNIEEHAASDVERMI 118
Query: 195 CGQQVRPTVVGRRHGASTRGAQ---SYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G + + RR + RG Q Y F+ETSAK + +D+AF+TL R+I K K+ +
Sbjct: 119 IGNKC--DIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI-KSKMEQ 175
Query: 366 DKKFKG 383
++ G
Sbjct: 176 NEMRAG 181
>AF000192-2|AAB52888.1| 196|Caenorhabditis elegans Rab family
protein 37 protein.
Length = 196
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + ++ Y R + LLV+ + + SFE+ + G+
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTL 113
Query: 195 CGQQVR-PTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDK 356
G + P V G R A++Y +PF+ETSAKT VD AF L + K K
Sbjct: 114 VGNKCDLPRAVPTDEGK--RLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLK 166
>AB162902-1|BAD32698.1| 196|Caenorhabditis elegans Rab37 protein.
Length = 196
Score = 57.2 bits (132), Expect = 1e-08
Identities = 39/115 (33%), Positives = 55/115 (47%), Gaps = 1/115 (0%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + ++ Y R + LLV+ + + SFE+ + G+
Sbjct: 54 LQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQIKEYGKEAVQVTL 113
Query: 195 CGQQVR-PTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDK 356
G + P V G R A++Y +PF+ETSAKT VD AF L + K K
Sbjct: 114 VGNKCDLPRAVPTDEGK--RLAEAYQIPFMETSAKTGFNVDRAFLGLAERMLKLK 166
>Z73103-10|CAA97427.2| 205|Caenorhabditis elegans Hypothetical
protein C08F8.7 protein.
Length = 205
Score = 56.8 bits (131), Expect = 1e-08
Identities = 36/124 (29%), Positives = 62/124 (50%), Gaps = 5/124 (4%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L+ILDTAG E+++ MR+ Y RT +GF+LVF++ +FE++ + D + RG+
Sbjct: 53 LEILDTAGTEQFTGMRETYYRTAQGFVLVFSLAETSTFENLKQTFTDIIAI-RGKEVPMI 111
Query: 195 CGQQVRPTVVGRR--HGASTRGAQSYNVPFVETSAKTRMGVDDAF---YTLVREIRKDKV 359
R+ + A+ +P+ ETSA+ V + F L+++ K +
Sbjct: 112 LVGNKSDLAETRQVDESEAHNFAEKLKIPYFETSARLNQNVSEVFEECAVLIQKSAKPNI 171
Query: 360 SRDK 371
R K
Sbjct: 172 ERRK 175
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/25 (56%), Positives = 19/25 (76%), Gaps = 1/25 (4%)
Frame = +1
Query: 175 EEVPMVLVGNKCDL-QSWAVDMARA 246
+EVPM+LVGNK DL ++ VD + A
Sbjct: 106 KEVPMILVGNKSDLAETRQVDESEA 130
>AL031254-1|CAA20282.1| 395|Caenorhabditis elegans Hypothetical
protein 4R79.2 protein.
Length = 395
Score = 51.6 bits (118), Expect = 5e-07
Identities = 36/119 (30%), Positives = 57/119 (47%), Gaps = 7/119 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF------EDMARIGADQASEGRG 176
+ + DTAGQE + ++ QY R +G +L+F V S +SF D R G D A+
Sbjct: 254 MQLWDTAGQERFRSITKQYFRKADGVVLMFDVTSEQSFLNVRNWIDSVRAGVDDATVMCL 313
Query: 177 RG-AHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G G + + V R A+ + A + +PF ETSA T G+D + +++
Sbjct: 314 VGNKMDLFGSDIARSAVYR---AAEKLAVEFKIPFFETSAYTGFGIDTCMRQMAENLQR 369
>AF101310-3|AAC69218.1| 205|Caenorhabditis elegans Rab family
protein 1 protein.
Length = 205
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/115 (27%), Positives = 53/115 (46%), Gaps = 4/115 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + + Y R G ++V+ + ++F ++ + +
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLL 121
Query: 195 CGQQVRPTVVGRRHGASTRGAQSY----NVPFVETSAKTRMGVDDAFYTLVREIR 347
G + T + T+ AQ Y +PF+ETSAK+ V+ AF T+ EI+
Sbjct: 122 VGNKCDLTA---KRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIK 173
>U97191-2|AAB52431.1| 214|Caenorhabditis elegans Uncoordinated
protein 108 protein.
Length = 214
Score = 47.2 bits (107), Expect = 1e-05
Identities = 33/113 (29%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + ++ Y R G LLV+ + +F + D
Sbjct: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIML 116
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G + + RR G A+ + + F+ETSAKT V++AF +EI
Sbjct: 117 IGN--KSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 167
>Z66499-1|CAA91296.1| 207|Caenorhabditis elegans Hypothetical
protein T01B7.3 protein.
Length = 207
Score = 46.4 bits (105), Expect = 2e-05
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 3/113 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE+Y A+ Y R G LLVF + KSFE + + +
Sbjct: 63 LHIWDTAGQEKYHALGPIYYRGSNGVLLVFDITDRKSFEKVKNWVLEIKTCLGNTAEILI 122
Query: 195 CGQQV---RPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G ++ V R+ + A+S ++ETSA+ +G+ DAF +L ++
Sbjct: 123 VGNKIDLEEERQVTRQDAEAY--AESEGALYMETSAQDNVGISDAFESLTAKM 173
>Z47808-1|CAA87774.2| 229|Caenorhabditis elegans Hypothetical
protein D2013.1 protein.
Length = 229
Score = 46.4 bits (105), Expect = 2e-05
Identities = 31/117 (26%), Positives = 60/117 (51%), Gaps = 6/117 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DTAGQE++ ++ Y R G L ++ + +SFE + +A+ G +
Sbjct: 69 LQLWDTAGQEKFRSITKSYYRNSVGVLAIYDTTNRESFEHVEN-WVKEAALNLGGPSPSK 127
Query: 195 CGQQV---RPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIR 347
C Q+ + + +R G A+ + + F+ETS++T V++AF+ + +EI+
Sbjct: 128 CVFQLVGTKSDMDSQRQVNYEEGEYFAKYHKMKFIETSSRTGDNVNEAFHMIAQEIQ 184
>Z81516-4|CAB04205.1| 208|Caenorhabditis elegans Hypothetical
protein F26H9.6 protein.
Length = 208
Score = 44.8 bits (101), Expect = 6e-05
Identities = 30/112 (26%), Positives = 53/112 (47%), Gaps = 3/112 (2%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFE---DMARIGADQASEGRGRGAH 188
+I DTAGQE Y ++ Y R + ++V+ + + +SF+ + + QAS
Sbjct: 71 EIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNQESFQKAKNWVKELQRQASPNIVMALA 130
Query: 189 GTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G V + + A+ + F+ETSAKT M V+D F + +++
Sbjct: 131 GNKADVANKRTV--EYEEANAYAEDNALLFMETSAKTSMNVNDIFMAIAKKL 180
>U64600-3|AAK39204.1| 656|Caenorhabditis elegans Temporarily
assigned gene nameprotein 312 protein.
Length = 656
Score = 43.2 bits (97), Expect = 2e-04
Identities = 37/116 (31%), Positives = 54/116 (46%), Gaps = 6/116 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAH-G 191
L + DTAGQE + ++ Y R +G +LV+ V + +SF R + E R
Sbjct: 512 LQLWDTAGQERFRSLCKSYFRRADGAILVYDVCAEQSFL-RVRDWIETIKESTERSIPII 570
Query: 192 TCGQQV-----RPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G +V P V + GAS A + V F+ETSA +D+A L RE+
Sbjct: 571 LVGNKVDMRISTPGSVAKTDGASM--AAAMGVLFMETSALDGSNIDNAMLALTREL 624
>AC024875-5|AAM44401.1| 203|Caenorhabditis elegans Rab family
protein 18, isoform b protein.
Length = 203
Score = 43.2 bits (97), Expect = 2e-04
Identities = 35/113 (30%), Positives = 49/113 (43%), Gaps = 3/113 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR--IGADQASEGRGRGAH 188
L I DTAGQE + + Y R +G + V+ V S SFE + D
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKM 121
Query: 189 GTCGQQVRPT-VVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
+ P VV R G + A+ + F+E SAKT+ GV F L+ +I
Sbjct: 122 MVANKIDMPNRVVTREEG--LKFAKRHRTLFIEASAKTKEGVQCTFEELIEKI 172
>Z79601-4|CAB01884.1| 210|Caenorhabditis elegans Hypothetical
protein K09A9.2 protein.
Length = 210
Score = 42.7 bits (96), Expect = 3e-04
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 3/113 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + A+ Y R G L+V+ + ++ ++ AD S A
Sbjct: 62 LQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFL 121
Query: 195 CGQQVRPTVVGRR---HGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI 344
G + + +R + + A+ + F+E SAKT V+DAF ++I
Sbjct: 122 IGN--KADLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQI 172
>Z92830-3|CAB07356.1| 201|Caenorhabditis elegans Hypothetical
protein F11A5.3 protein.
Length = 201
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 3/115 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DT GQE + ++ Y R G LLV+ + KSF + + +D G
Sbjct: 57 LRVWDTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIML 116
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
G + V R + G A+ + F+ETSAK V+ AF EI K
Sbjct: 117 IGNKSDLKAV--RDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYK 169
>U68257-1|AAB16972.1| 124|Caenorhabditis elegans rab10-like
protein.
Length = 124
Score = 42.3 bits (95), Expect = 3e-04
Identities = 18/43 (41%), Positives = 28/43 (65%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
L I DTAGQE + + Y R G +LV+ + +AKSF+++A+
Sbjct: 60 LQIWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK 102
>AL117202-19|CAB57899.1| 209|Caenorhabditis elegans Hypothetical
protein Y47D3A.25 protein.
Length = 209
Score = 42.3 bits (95), Expect = 3e-04
Identities = 36/138 (26%), Positives = 60/138 (43%), Gaps = 3/138 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR--IGADQASEGRGRGAH 188
L I DTAGQE + + Y R G ++V+ V + +SF ++ R + + +
Sbjct: 61 LQIWDTAGQERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQKVLV 120
Query: 189 GT-CGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G C + R V+ + AQS N+ F ETSAK V+ F + + K++
Sbjct: 121 GNKCEENERRVVL---ESDARNYAQSMNISFFETSAKEDKNVEPMFTCITSLVLTAKLAN 177
Query: 366 DKKFKGKKPRHVHKIIKD 419
+ + R +KD
Sbjct: 178 PQSASKDQSRTGGVSLKD 195
>U40942-7|AAC47067.2| 218|Caenorhabditis elegans Hypothetical
protein K02E10.1 protein.
Length = 218
Score = 41.9 bits (94), Expect = 4e-04
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 2/114 (1%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L++ DTAG E Y + + Y + G + V+ + + KSFE++ + + + A
Sbjct: 57 LELWDTAGMERYRTIYNSYYHSAHGVMCVYDMTNEKSFENLEKYWLKEIKQHAPPNAVLM 116
Query: 195 CGQQVRPTVVGRR--HGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRK 350
R+ + + A V E SAKT + ++AF+TL +R+
Sbjct: 117 LVGNKADMDQERKVDFDRAEKLASRLGVSLYEVSAKTGINCEEAFHTLTAAMRE 170
>Z66516-6|CAA91357.1| 209|Caenorhabditis elegans Hypothetical
protein W03C9.3 protein.
Length = 209
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 6/115 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGA-HG 191
L I DTAGQE + ++ + R + +L F V +A SF+ + + + R H
Sbjct: 60 LQIWDTAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHF 119
Query: 192 TCGQQVRPTVVGRRHGASTRGAQSY-----NVPFVETSAKTRMGVDDAFYTLVRE 341
+ + S++ AQS+ N+P+ E SAK + V+ AF + R+
Sbjct: 120 PFVLLGNKVDLESQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARD 174
>Z22178-5|CAA80155.1| 207|Caenorhabditis elegans Hypothetical
protein F54C8.5 protein.
Length = 207
Score = 41.1 bits (92), Expect = 8e-04
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 5/132 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DTAGQ+EY+ GF+LV+A++ KSFE + I ++ G +
Sbjct: 63 LRVTDTAGQQEYTVFPRSCSLDINGFILVYAIDDRKSFEMCSNI-YEKIVRTYGDTSIPI 121
Query: 195 CGQQVRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVDDAFYTLVREIR--KDKV 359
+ + +R + G A+ ++ FVE +A+ V + F L+REI + +
Sbjct: 122 VIVGNKTDLSTQRVVRAEEGEELARQWDAKFVEITARESNRVHEVFELLLREIEISRGNL 181
Query: 360 SRDKKFKGKKPR 395
S ++ G P+
Sbjct: 182 SPTERPNGNSPK 193
Score = 27.9 bits (59), Expect = 7.7
Identities = 14/37 (37%), Positives = 20/37 (54%)
Frame = +1
Query: 142 VSEQIKRVKDAEEVPMVLVGNKCDLQSWAVDMARARE 252
+ E+I R +P+V+VGNK DL + V A E
Sbjct: 106 IYEKIVRTYGDTSIPIVIVGNKTDLSTQRVVRAEEGE 142
>Z11505-4|CAA77590.1| 205|Caenorhabditis elegans Hypothetical
protein F59B2.7 protein.
Length = 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 4/107 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DTAGQE + ++ Y+R ++V+ + +A SF + D +E RG
Sbjct: 62 LQLWDTAGQERFRSLIPSYIRDSSVAVVVYDITNANSFHQTTKWVDDVRNE---RGCDVI 118
Query: 195 CGQQVRPTVVGRRHGAST----RGAQSYNVPFVETSAKTRMGVDDAF 323
T + + ST + A+ NV F+ETSAK V F
Sbjct: 119 IVLVGNKTDLADKRQVSTEDGEKKARDLNVMFIETSAKAGYNVKQLF 165
>U68266-1|AAB16981.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGA 185
L I DTAGQE Y + Y R GF+L++ + + +SF +D + E
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVL 132
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
G VV G A + F ETSAK + V F LV EI DK++
Sbjct: 133 VGNKCDMDSERVVSMDRGRQL--ADQLGLEFFETSAKENINVKAVFEKLV-EIICDKMA 188
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 EEVPMVLVGNKCDLQS-WAVDMARAREV 255
E +VLVGNKCD+ S V M R R++
Sbjct: 126 ENAQVVLVGNKCDMDSERVVSMDRGRQL 153
>U68265-1|AAB16980.1| 219|Caenorhabditis elegans RAB-3 protein.
Length = 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGA 185
L I DTAGQE Y + Y R GF+L++ + + +SF +D + E
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVL 132
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
G VV G A + F ETSAK + V F LV EI DK++
Sbjct: 133 VGNKCDMDSERVVSMDRGRQL--ADQLGLEFFETSAKENINVKAVFEKLV-EIICDKMA 188
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 EEVPMVLVGNKCDLQS-WAVDMARAREV 255
E +VLVGNKCD+ S V M R R++
Sbjct: 126 ENAQVVLVGNKCDMDSERVVSMDRGRQL 153
>U28944-15|AAK68196.1| 219|Caenorhabditis elegans Rab family
protein 3, isoform b protein.
Length = 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGA 185
L I DTAGQE Y + Y R GF+L++ + + +SF +D + E
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVL 132
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
G VV G A + F ETSAK + V F LV EI DK++
Sbjct: 133 VGNKCDMDSERVVSMDRGRQL--ADQLGLEFFETSAKENINVKAVFEKLV-EIICDKMA 188
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 EEVPMVLVGNKCDLQS-WAVDMARAREV 255
E +VLVGNKCD+ S V M R R++
Sbjct: 126 ENAQVVLVGNKCDMDSERVVSMDRGRQL 153
>U28944-14|AAK68195.1| 233|Caenorhabditis elegans Rab family
protein 3, isoform a protein.
Length = 233
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGA 185
L I DTAGQE Y + Y R GF+L++ + + +SF +D + E
Sbjct: 87 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVL 146
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
G VV G A + F ETSAK + V F LV EI DK++
Sbjct: 147 VGNKCDMDSERVVSMDRGRQL--ADQLGLEFFETSAKENINVKAVFEKLV-EIICDKMA 202
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 EEVPMVLVGNKCDLQS-WAVDMARAREV 255
E +VLVGNKCD+ S V M R R++
Sbjct: 140 ENAQVVLVGNKCDMDSERVVSMDRGRQL 167
>AB112928-1|BAD07033.1| 219|Caenorhabditis elegans Rab3 protein.
Length = 219
Score = 40.7 bits (91), Expect = 0.001
Identities = 37/119 (31%), Positives = 50/119 (42%), Gaps = 3/119 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF---EDMARIGADQASEGRGRGA 185
L I DTAGQE Y + Y R GF+L++ + + +SF +D + E
Sbjct: 73 LQIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNSVQDWCTQIKTYSWENAQVVL 132
Query: 186 HGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
G VV G A + F ETSAK + V F LV EI DK++
Sbjct: 133 VGNKCDMDSERVVSMDRGRQL--ADQLGLEFFETSAKENINVKAVFEKLV-EIICDKMA 188
Score = 28.7 bits (61), Expect = 4.4
Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
Frame = +1
Query: 175 EEVPMVLVGNKCDLQS-WAVDMARAREV 255
E +VLVGNKCD+ S V M R R++
Sbjct: 126 ENAQVVLVGNKCDMDSERVVSMDRGRQL 153
>U39996-4|AAA81090.2| 266|Caenorhabditis elegans Hypothetical
protein C56E6.2 protein.
Length = 266
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/43 (39%), Positives = 25/43 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
L + DTAGQE + M YMR + L+V+ V +FED+ +
Sbjct: 107 LQVWDTAGQERFRCMVPMYMRNADAALIVYDVTDRNTFEDVEK 149
>Z93391-6|CAJ85753.1| 198|Caenorhabditis elegans Hypothetical
protein W04G5.2 protein.
Length = 198
Score = 39.5 bits (88), Expect = 0.002
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM---ARIGADQASEGRGRGA 185
+ I DTAG E + Y R G LLV+ ++ K++E + ++ D A+E
Sbjct: 59 VQIWDTAGMERFRCGASSYYRGALGALLVYDISKHKTYESVEQWLKVLRDHANE------ 112
Query: 186 HGTCGQQVRPTVVGRR----HGASTRGAQSY----NVPFVETSAKTRMGVDDAFYTLVRE 341
+ T+VG + H T A+ Y ++ F+ETSA V+ AF +V E
Sbjct: 113 ------DIVITLVGNKSDLSHAVPTDEAKIYAERNHISFIETSALDNTNVEAAFTNIVTE 166
Query: 342 IRK 350
I K
Sbjct: 167 IYK 169
>Z92830-4|CAB07357.1| 203|Caenorhabditis elegans Hypothetical
protein F11A5.4 protein.
Length = 203
Score = 39.5 bits (88), Expect = 0.002
Identities = 42/142 (29%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSF-------EDMARIG-ADQASEG 170
L + DT GQE + ++ Y R G LLV+ + S +SF D+ R+G D
Sbjct: 57 LHVWDTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVL 116
Query: 171 RGRGAHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREI-R 347
G + ++VR + G + A+ + + F+E SAKT V++AF EI R
Sbjct: 117 IGNKSDLEADREVR-----KEEGEAF--AREFGLIFMEISAKTNEYVEEAFVNSAHEIYR 169
Query: 348 KDKVSRDKKFKGKKPRHVHKII 413
K K+ KK + II
Sbjct: 170 KLNFGIIKEICVKKKKKKMNII 191
>U43283-2|AAC69020.1| 205|Caenorhabditis elegans Rab family protein
6.2 protein.
Length = 205
Score = 39.5 bits (88), Expect = 0.002
Identities = 30/107 (28%), Positives = 50/107 (46%), Gaps = 4/107 (3%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DTAGQE + ++ Y+R ++V+ + ++ SF ++ D +E RG+
Sbjct: 61 LQLWDTAGQERFRSLIPSYIRDSTVAVVVYDITNSNSFHQTSKWIDDVRTE---RGSDVI 117
Query: 195 CGQQVRPTVVGRRHGAST----RGAQSYNVPFVETSAKTRMGVDDAF 323
T + + +T R A+ NV F+ETSAK V F
Sbjct: 118 IMLVGNKTDLSDKRQVTTDEGERKAKELNVMFIETSAKAGYNVKQLF 164
>AL110500-4|CAB54484.1| 215|Caenorhabditis elegans Hypothetical
protein Y87G2A.4 protein.
Length = 215
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Frame = +3
Query: 6 RGLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGA 185
R LL + DTAGQE + ++ + R GF+L+F + + +SF ++ D S+ +
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNI----RDWLSQLK---V 116
Query: 186 HGTCGQQ------VRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVD 314
H C Q + + RR ++ R A +P+ ETSA T V+
Sbjct: 117 HAYCEQPDIIICGNKADLENRRQVSTARAKQLADQLGLPYFETSACTSTNVE 168
>AL032621-1|CAA21489.1| 216|Caenorhabditis elegans Hypothetical
protein Y45F3A.2 protein.
Length = 216
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/123 (26%), Positives = 50/123 (40%), Gaps = 3/123 (2%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L I DTAGQE + ++ Y R+ +LV+ V+ SF+ + + S R
Sbjct: 58 LQIWDTAGQERFRSITQSYYRSAHAIVLVYDVSCQPSFDCLPEWLGEIESYANRRVLKIL 117
Query: 195 CGQQV---RPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVSR 365
G +V V R G ++ F+ETSA VD F + + D
Sbjct: 118 VGNKVDKGDEREVPERIGRDFSDVNQFDY-FLETSALDATNVDQLFEQVATRLTNDMKLT 176
Query: 366 DKK 374
D++
Sbjct: 177 DER 179
>AB112930-1|BAD07035.1| 215|Caenorhabditis elegans Rab27 protein.
Length = 215
Score = 39.5 bits (88), Expect = 0.002
Identities = 32/112 (28%), Positives = 53/112 (47%), Gaps = 9/112 (8%)
Frame = +3
Query: 6 RGLLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGA 185
R LL + DTAGQE + ++ + R GF+L+F + + +SF ++ D S+ +
Sbjct: 64 RVLLQLWDTAGQERFRSLTTAFFRDAMGFILIFDITNEQSFLNI----RDWLSQLK---V 116
Query: 186 HGTCGQQ------VRPTVVGRRHGASTRG---AQSYNVPFVETSAKTRMGVD 314
H C Q + + RR ++ R A +P+ ETSA T V+
Sbjct: 117 HAYCEQPDIIICGNKADLENRRQVSTARAKQLADQLGLPYFETSACTSTNVE 168
>Z75710-2|CAB00025.2| 381|Caenorhabditis elegans Hypothetical
protein D1081.4 protein.
Length = 381
Score = 38.7 bits (86), Expect = 0.004
Identities = 14/41 (34%), Positives = 28/41 (68%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFED 134
++ I+D++G ++ M++ Y+ T + FL+VFA + A S E+
Sbjct: 72 MVQIIDSSGSRDFIGMKNLYIGTADAFLVVFAADDASSLEE 112
>Z92803-6|CAB07240.1| 215|Caenorhabditis elegans Hypothetical
protein K01G5.4 protein.
Length = 215
Score = 37.5 bits (83), Expect = 0.010
Identities = 29/113 (25%), Positives = 54/113 (47%), Gaps = 1/113 (0%)
Frame = +3
Query: 18 DILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTC 197
++ DTAGQE++ +RD Y G+ +++F V + +++++ D A C
Sbjct: 61 NVWDTAGQEKFGGLRDGYYIQGQCAIIMFDVTARVTYKNVPNWHRDLARVCENIPI-VLC 119
Query: 198 GQQVRPTVVGRRHGAST-RGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKD 353
G +V V R+ A T + N+ + + SAK+ + F L R++ D
Sbjct: 120 GNKV--DVKDRKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWLARKLLGD 170
>U68256-1|AAB16971.1| 123|Caenorhabditis elegans rab8-like protein.
Length = 123
Score = 37.5 bits (83), Expect = 0.010
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L I DTAGQE + + Y R G +LV+ + + +SFE++
Sbjct: 59 LQIWDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENI 99
>AC024875-6|AAK29988.3| 193|Caenorhabditis elegans Rab family
protein 18, isoform a protein.
Length = 193
Score = 37.5 bits (83), Expect = 0.010
Identities = 37/130 (28%), Positives = 50/130 (38%), Gaps = 20/130 (15%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFED-------------------- 134
L I DTAGQE + + Y R +G + V+ V S SFE
Sbjct: 35 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNHWMQEVDTYCTNDNIIKM 94
Query: 135 MARIGADQASEGRGRGAHGTCGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVD 314
M D + R G VV R G + A+ + F+E SAKT+ GV
Sbjct: 95 MVANKIDMVRKSRFCSIFGLKNNFQPNRVVTREEG--LKFAKRHRTLFIEASAKTKEGVQ 152
Query: 315 DAFYTLVREI 344
F L+ +I
Sbjct: 153 CTFEELIEKI 162
>AF003139-1|AAB54158.1| 211|Caenorhabditis elegans Rab family
protein 11.1 protein.
Length = 211
Score = 36.7 bits (81), Expect = 0.017
Identities = 34/115 (29%), Positives = 49/115 (42%), Gaps = 5/115 (4%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTCG 200
I DTAGQE Y A+ Y R G LLV+ + ++E++ R E R
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVER----WLKELRDHADQNIVI 119
Query: 201 QQV-RPTVVGRRHGASTRGAQSY----NVPFVETSAKTRMGVDDAFYTLVREIRK 350
V + + T A+ Y + F+ETSA V+ AF ++ EI K
Sbjct: 120 MLVGNKSDLRHLRAVPTDEAKIYAERNQLSFIETSALDSTNVEAAFTNILTEIYK 174
>X68492-1|CAA48506.1| 191|Caenorhabditis elegans small ras-related
protein protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ FA+N+ SFE++
Sbjct: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENV 93
>L04287-1|AAA28141.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ FA+N+ SFE++
Sbjct: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENV 93
>L03711-1|AAA28140.1| 191|Caenorhabditis elegans rac1 protein
protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ FA+N+ SFE++
Sbjct: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENV 93
>AF226867-1|AAF33846.1| 191|Caenorhabditis elegans cell-corpse
engulfment proteinCED-10 protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ FA+N+ SFE++
Sbjct: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENV 93
>AF038608-16|AAC25821.1| 191|Caenorhabditis elegans Cell death
abnormality protein10, isoform b protein.
Length = 191
Score = 36.3 bits (80), Expect = 0.022
Identities = 17/41 (41%), Positives = 26/41 (63%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ FA+N+ SFE++
Sbjct: 53 LGLWDTAGQEDYDRLRPLSYPQTDVFLVCFALNNPASFENV 93
>Z71180-2|CAA94890.1| 207|Caenorhabditis elegans Hypothetical
protein F22E12.2 protein.
Length = 207
Score = 35.5 bits (78), Expect = 0.038
Identities = 33/127 (25%), Positives = 56/127 (44%), Gaps = 7/127 (5%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAH-- 188
L + DTAGQ + +R + F++V++V +SFED++ + ++ R G
Sbjct: 59 LQLHDTAGQSSFDTLRPLCYTDADVFVIVYSVVDLQSFEDVSHHWYPEVTK-RNPGTKLI 117
Query: 189 --GTCGQ---QVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLVREIRKD 353
GT QVR V + G + A F E SA T+ + F + +
Sbjct: 118 LVGTQADQRWQVRGNTVTQLRGKAL--ADRLGAEFFECSALTQHNLKQMFDAAILAGLEG 175
Query: 354 KVSRDKK 374
K +R+K+
Sbjct: 176 KKNREKR 182
>U68258-1|AAB16973.1| 127|Caenorhabditis elegans rab11-like
protein.
Length = 127
Score = 35.5 bits (78), Expect = 0.038
Identities = 17/41 (41%), Positives = 24/41 (58%)
Frame = +3
Query: 21 ILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMAR 143
I DTAGQE Y A+ Y R G LLV+ + ++E++ R
Sbjct: 64 IWDTAGQERYRAITSAYYRGAVGALLVYDIAKHVTYENVER 104
>Z82276-7|CAB05247.2| 195|Caenorhabditis elegans Hypothetical
protein K03D3.10 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQ++Y R + FL+ FA+N+ SFE++
Sbjct: 53 LSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENV 93
>Z78417-3|CAB01691.1| 195|Caenorhabditis elegans Hypothetical
protein C35C5.4 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.051
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGR----- 179
L + DTAGQE+Y +R + F+L F+V S SF+++A + +
Sbjct: 57 LGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVIL 116
Query: 180 -GAHGTCGQQVRPTVVGRRHGAS----TRG---AQSYN-VPFVETSAKTRMGVDDAFYTL 332
G + P + G S T+G AQ V ++E SA T+ G+ F
Sbjct: 117 VGTKLDLRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDA 176
Query: 333 VREIRKDKVSRDKK 374
VR I K + KK
Sbjct: 177 VRSILHPKPQKKKK 190
>U82288-1|AAC47729.1| 195|Caenorhabditis elegans Rac-like GTPase
protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.051
Identities = 38/134 (28%), Positives = 57/134 (42%), Gaps = 14/134 (10%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGR----- 179
L + DTAGQE+Y +R + F+L F+V S SF+++A + +
Sbjct: 57 LGLWDTAGQEDYDRLRPLSYPQTDVFILCFSVVSPVSFDNVASKWIPEIRQHCPDAPVIL 116
Query: 180 -GAHGTCGQQVRPTVVGRRHGAS----TRG---AQSYN-VPFVETSAKTRMGVDDAFYTL 332
G + P + G S T+G AQ V ++E SA T+ G+ F
Sbjct: 117 VGTKLDLRDEAEPMRALQAEGKSPISKTQGMKMAQKIKAVKYLECSALTQQGLTQVFEDA 176
Query: 333 VREIRKDKVSRDKK 374
VR I K + KK
Sbjct: 177 VRSILHPKPQKKKK 190
>U55018-1|AAB40386.1| 195|Caenorhabditis elegans CeRac2 protein.
Length = 195
Score = 35.1 bits (77), Expect = 0.051
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQ++Y R + FL+ FA+N+ SFE++
Sbjct: 53 LSLWDTAGQDDYDQFRHLSFPQTDVFLVCFALNNPASFENV 93
>U23452-10|AAK31543.1| 191|Caenorhabditis elegans Hypothetical
protein R07G3.1 protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ F+V + SFE++
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENV 93
>S82771-1|AAC05600.1| 191|Caenorhabditis elegans cdc42 homolog
protein.
Length = 191
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ F+V + SFE++
Sbjct: 53 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENV 93
>L10078-1|AAA51433.1| 188|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 188
Score = 33.5 bits (73), Expect = 0.16
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + FL+ F+V + SFE++
Sbjct: 50 LGLFDTAGQEDYDRLRPLSYPQTDVFLVCFSVVAPASFENV 90
>AF016440-6|AAN84798.1| 525|Caenorhabditis elegans Hypothetical
protein F29G9.2b protein.
Length = 525
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -2
Query: 323 ESVVNSHACFGRCFDERNIIALRTSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSD 144
ES NS + G DE+ II MS + DC L P T TSS S + + +D
Sbjct: 334 ESFWNSSSNVGSDCDEKTIIERGWLGEEVMSNSEDCHLELKPVMT--TSSTSSSHIFGND 391
Query: 143 TSHVFETFST 114
+F++ ++
Sbjct: 392 KCPMFDSMTS 401
>AF016440-5|AAB65904.2| 535|Caenorhabditis elegans Hypothetical
protein F29G9.2a protein.
Length = 535
Score = 33.5 bits (73), Expect = 0.16
Identities = 22/70 (31%), Positives = 33/70 (47%)
Frame = -2
Query: 323 ESVVNSHACFGRCFDERNIIALRTSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSD 144
ES NS + G DE+ II MS + DC L P T TSS S + + +D
Sbjct: 344 ESFWNSSSNVGSDCDEKTIIERGWLGEEVMSNSEDCHLELKPVMT--TSSTSSSHIFGND 401
Query: 143 TSHVFETFST 114
+F++ ++
Sbjct: 402 KCPMFDSMTS 411
>U97592-7|AAB52874.2| 332|Caenorhabditis elegans Sperm-specific
family, class rprotein 2 protein.
Length = 332
Score = 31.9 bits (69), Expect = 0.47
Identities = 14/34 (41%), Positives = 22/34 (64%)
Frame = +1
Query: 121 KVSKTWLVSEQIKRVKDAEEVPMVLVGNKCDLQS 222
++S W E R D E+P+V+VGNKCD+++
Sbjct: 104 EMSDIW--QEICSRRSDLNELPIVVVGNKCDVEN 135
>AC024859-6|AAK29982.1| 195|Caenorhabditis elegans Hypothetical
protein Y71H2AM.12 protein.
Length = 195
Score = 31.5 bits (68), Expect = 0.63
Identities = 32/137 (23%), Positives = 53/137 (38%), Gaps = 1/137 (0%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGT 194
L + DTAGQE + + Y+R+ LLV ++ E + R + +
Sbjct: 58 LQLWDTAGQERFRQLAPAYIRSARVALLVIDLSDENCVEHLIR-WKGIIDKNKSDFTSTI 116
Query: 195 CGQQVRPTVVGRRHGASTRGAQSYNVPFVETSAKTRMGVDDAFYTLV-REIRKDKVSRDK 371
V +R T + N ++ETSAK R + F ++ R + + S+
Sbjct: 117 IVGNKHDLVSEKRSPRLTAIIRETNDEYIETSAKMRKNIKKLFSSVACRPFPEHETSQII 176
Query: 372 KFKGKKPRHVHKIIKDC 422
+PR V K C
Sbjct: 177 LL--NEPRPVESATKRC 191
>L36965-1|AAC37216.1| 192|Caenorhabditis elegans guanine nucleotide
regulatory proteinprotein.
Length = 192
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + L+ F+++S S E++
Sbjct: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI 95
>AL132952-3|CAB63379.1| 192|Caenorhabditis elegans Hypothetical
protein Y51H4A.3 protein.
Length = 192
Score = 30.3 bits (65), Expect = 1.4
Identities = 14/41 (34%), Positives = 24/41 (58%)
Frame = +3
Query: 15 LDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFEDM 137
L + DTAGQE+Y +R + L+ F+++S S E++
Sbjct: 55 LALWDTAGQEDYDRLRPLSYPDTDVILMCFSIDSPDSLENI 95
>AF039038-1|AAK21435.1| 877|Caenorhabditis elegans Hypothetical
protein K06A5.4 protein.
Length = 877
Score = 30.3 bits (65), Expect = 1.4
Identities = 24/77 (31%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +3
Query: 171 RGRGAHGTCGQQVRPTVVGRRHG---ASTRGAQSYN-VPFVETSAKTRMGVDDAFYTLVR 338
RGR A + G+ VR RRHG RG + YN A +R G D+ +
Sbjct: 441 RGRDASSSSGRSVRFEEEHRRHGDEYRDPRGPRDYNDYGRRRNHANSRSGEDEEKLNAI- 499
Query: 339 EIRKDKVSRDKKFKGKK 389
+R++K R++ K +K
Sbjct: 500 -VRREKELRNRLQKSQK 515
>U28733-4|AAA68305.2| 125|Caenorhabditis elegans Di-ras/rig/noey2
ras-like proteinhomolog protein 1 protein.
Length = 125
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/99 (24%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Frame = +3
Query: 81 GEGFLLVFAVNSAKSFEDMARIGADQASEGRGRGAHGTCGQQV--RPTVVGRRHGASTRG 254
G F+L+++V + +SF ++ I + E +G T V + +R +S G
Sbjct: 9 GNAFILIYSVTNKQSFAELVPI-IEMMKEVKGNAIAETPIMLVGNKKDEESKREVSSNSG 67
Query: 255 ---AQSYNVPFVETSAKTRMGVDDAFYTLVREIRKDKVS 362
A + F+ETSAK + + F L+ +K +++
Sbjct: 68 QKVATNMECGFIETSAKNNENITELFQQLLALEKKRQLA 106
>AL032632-1|CAA21582.1| 248|Caenorhabditis elegans Hypothetical
protein Y11D7A.4 protein.
Length = 248
Score = 29.1 bits (62), Expect = 3.3
Identities = 14/41 (34%), Positives = 22/41 (53%)
Frame = +3
Query: 12 LLDILDTAGQEEYSAMRDQYMRTGEGFLLVFAVNSAKSFED 134
L+ + D GQ M D+Y+ LV+ V ++KSFE+
Sbjct: 86 LVQVWDIGGQSIAGEMIDKYLTGANIVFLVYDVTNSKSFEN 126
>Z83744-3|CAE17679.1| 158|Caenorhabditis elegans Hypothetical
protein C06A12.8 protein.
Length = 158
Score = 28.3 bits (60), Expect = 5.8
Identities = 20/61 (32%), Positives = 25/61 (40%), Gaps = 3/61 (4%)
Frame = -2
Query: 314 VNSHACFGRCFDER---NIIALRTSRARAMSTAHDCRSHLLPTSTMGTSSASFTRLICSD 144
V SH F RCF R ++ A S +HD HLL S + + SFT
Sbjct: 91 VISHVIFERCFQLRRFGHVDARGKDFKFKFSESHDVPGHLLLRSFIAWTKRSFTNAFAIQ 150
Query: 143 T 141
T
Sbjct: 151 T 151
>Z35640-1|CAA84705.1| 307|Caenorhabditis elegans Hypothetical
protein F43D9.2 protein.
Length = 307
Score = 28.3 bits (60), Expect = 5.8
Identities = 9/14 (64%), Positives = 13/14 (92%)
Frame = +1
Query: 178 EVPMVLVGNKCDLQ 219
EVP +L+GNKCD++
Sbjct: 209 EVPRILIGNKCDVE 222
>AF039050-4|AAC47937.1| 499|Caenorhabditis elegans Cytochrome p450
family protein 34A7 protein.
Length = 499
Score = 28.3 bits (60), Expect = 5.8
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = +3
Query: 573 FGGKKTGCVTFRKQYHRLYYTQTDMLPIVRVC 668
+GG G FRKQY +++ +P V++C
Sbjct: 48 YGGLVAGFDQFRKQYGKVFTVWMGPIPAVQIC 79
>U58750-3|AAB00643.2| 350|Caenorhabditis elegans Hypothetical
protein F55G1.6 protein.
Length = 350
Score = 27.9 bits (59), Expect = 7.7
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 5/49 (10%)
Frame = -2
Query: 476 KEQACNSETAALFSLKKGAIFNYFVNVTWFLPFEF-----LVSADFIFA 345
+EQA SE + +FS K A F F W F + + S F+FA
Sbjct: 156 EEQASCSECSVIFSAFKPANFTQFFKANWIFYFLYALFLGVCSTSFLFA 204
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,365,921
Number of Sequences: 27780
Number of extensions: 376284
Number of successful extensions: 1161
Number of sequences better than 10.0: 77
Number of HSP's better than 10.0 without gapping: 1051
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1125
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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