Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00307
(746 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_35675| Best HMM Match : TB (HMM E-Value=8.4) 39 0.004
SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51) 39 0.005
SB_20871| Best HMM Match : Cauli_DNA-bind (HMM E-Value=0.99) 38 0.009
SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4) 36 0.035
SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4) 36 0.046
SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18) 35 0.061
SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4) 35 0.061
SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99) 35 0.061
SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4) 34 0.14
SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.25
SB_8310| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.43
SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.57
SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4) 32 0.57
SB_51695| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4) 31 0.99
SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5) 31 0.99
SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.99
SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4) 31 0.99
SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13) 31 0.99
SB_42669| Best HMM Match : Sorb (HMM E-Value=9.2) 31 1.3
SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4) 31 1.3
SB_1823| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.3
SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05) 31 1.3
SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_9319| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_54198| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_39681| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.0
SB_51640| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30) 29 4.0
SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30) 29 4.0
SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5) 29 4.0
SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5) 29 4.0
SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.0
SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28) 29 4.0
SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.3
SB_21705| Best HMM Match : Sorb (HMM E-Value=9.2) 28 7.0
SB_10258| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.0
SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34) 28 9.2
>SB_35675| Best HMM Match : TB (HMM E-Value=8.4)
Length = 251
Score = 39.1 bits (87), Expect = 0.004
Identities = 15/46 (32%), Positives = 31/46 (67%), Gaps = 2/46 (4%)
Frame = -1
Query: 677 KTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCVRAMCN 546
++ + Y+ + ++YCI +WG++ S++NR+F+ QK+ VR + N
Sbjct: 105 RSLMTLYYSLIFPYLQYCICVWGSTYPSNVNRLFLLQKRAVRIISN 150
>SB_9149| Best HMM Match : Lipase_GDSL (HMM E-Value=0.51)
Length = 604
Score = 38.7 bits (86), Expect = 0.005
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QKQC
Sbjct: 428 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKQCA 487
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K F+ + I IY +V LLK+ +N
Sbjct: 488 RVIIDKKWDAPAKPLFEELNIVPFDKRIIYLQLVLLLKAMNN 529
>SB_20871| Best HMM Match : Cauli_DNA-bind (HMM E-Value=0.99)
Length = 252
Score = 37.9 bits (84), Expect = 0.009
Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Frame = -3
Query: 405 NTRYPTK--LMLPSINTRYYHTNCYPMTIRIFNKIPNSIRDLPLTQFKRKL 259
NTRY +K L P+ T Y T M+ R + KIPN I+ LP F +L
Sbjct: 193 NTRYASKGNLFRPASKTNYGLTKFTAMSSRFWEKIPNCIKSLPYNSFIEQL 243
>SB_46049| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 35.9 bits (79), Expect = 0.035
Identities = 21/66 (31%), Positives = 34/66 (51%), Gaps = 2/66 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 64 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 123
Query: 560 RAMCNI 543
RAM N+
Sbjct: 124 RAMNNM 129
>SB_7414| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 323
Score = 35.5 bits (78), Expect = 0.046
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 178 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 237
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + + K F+ + I IY +V L K+ +N
Sbjct: 238 RVILDKKWDSPSKPLFEELNIVPFDKRIIYLQLVLLFKAMNN 279
>SB_30009| Best HMM Match : RVT_1 (HMM E-Value=1.2e-18)
Length = 552
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 401 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 460
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K F+ + I IY +V L K+ +N
Sbjct: 461 RVILDKKWDAPSKPLFEELNIVPFDKRIIYLQLVLLFKAMNN 502
>SB_25444| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 252
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 101 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 160
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K F+ + I IY +V L K+ +N
Sbjct: 161 RVILDKKWDAPSKPLFEELNIVPFDKGIIYLQLVLLFKAMNN 202
>SB_24694| Best HMM Match : RVT_1 (HMM E-Value=0.99)
Length = 309
Score = 35.1 bits (77), Expect = 0.061
Identities = 27/102 (26%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 199 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 258
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K F+ + I IY +V L K+ +N
Sbjct: 259 RVILDKKWDAPSKPLFEELNIVPFDKRIIYLQLVLLFKAMNN 300
>SB_47163| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 172
Score = 33.9 bits (74), Expect = 0.14
Identities = 26/102 (25%), Positives = 46/102 (45%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 64 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 123
Query: 560 RAMCNIHPLTSCKQFFQNIIF*LYHPYI-YKNVVCLLKSTHN 438
R + + K F+ + + I Y +V L K+ +N
Sbjct: 124 RVILDKKWDAPSKPLFEELNIVPFDKRITYLQLVLLFKAMNN 165
>SB_35551| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 375
Score = 33.1 bits (72), Expect = 0.25
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG HI+ + +K+C
Sbjct: 196 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGLTKKQHIDYMVKFEKRCA 255
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K F+ + I IY +V L K+ +N
Sbjct: 256 RVILDKKWDAPSKPLFEELNIVPFDKRIIYLQLVLLFKAMNN 297
>SB_29609| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 233
Score = 33.1 bits (72), Expect = 0.25
Identities = 25/93 (26%), Positives = 41/93 (44%), Gaps = 3/93 (3%)
Frame = -1
Query: 707 LWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCVRAMCNIHPL 534
L R K +LK YH + + Y +WG++ HI+ + QK+C R + +
Sbjct: 63 LKRKKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCARVILDKKWD 122
Query: 533 TSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
K F+ + I IY +V L K+ +N
Sbjct: 123 APSKPLFEELNIVPFDKRIIYLQLVLLFKAMNN 155
>SB_8310| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 325
Score = 32.3 bits (70), Expect = 0.43
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 HTIYIIVGAF*QTNNILVYIWM--VQLKYYVLEKLFTRSQ-RMNIAHGTNTLLLCNEHSI 593
H +YI + Q N +VYI M VQ+ +V+ T Q M++ H T T + N H +
Sbjct: 30 HVVYITMTCV-QVNMHVVYITMACVQVNMHVVYITMTCVQVNMHVVHITMTCVQVNMHVV 88
Query: 594 YVT 602
Y+T
Sbjct: 89 YIT 91
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 HTIYIIVGAF*QTNNILVYIWM--VQLKYYVLEKLFTRSQ-RMNIAHGTNTLLLCNEHSI 593
H +YI + Q N +V+I M VQ+ +V+ T Q M++ H T T + N H +
Sbjct: 58 HVVYITMTCV-QVNMHVVHITMTCVQVNMHVVYITMTCVQVNMHVVHITMTCVQVNMHVV 116
Query: 594 YVT 602
Y+T
Sbjct: 117 YIT 119
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 HTIYIIVGAF*QTNNILVYIWM--VQLKYYVLEKLFTRSQ-RMNIAHGTNTLLLCNEHSI 593
H +YI + Q N +VYI M VQ+ +V+ Q M++ H T T + N H +
Sbjct: 212 HVVYITMTCV-QVNMHVVYITMTCVQVNMHVVYITMACVQVNMHVVHITMTCVQVNMHVV 270
Query: 594 YVT 602
Y+T
Sbjct: 271 YIT 273
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/63 (31%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 HTIYIIVGAF*QTNNILVYIWM--VQLKYYVLEKLFTRSQ-RMNIAHGTNTLLLCNEHSI 593
H +YI + Q N +V+I M VQ+ +V+ Q M++ H T T + N H +
Sbjct: 240 HVVYITMACV-QVNMHVVHITMTCVQVNMHVVYITMACVQVNMHVVHITMTCVQVNMHVV 298
Query: 594 YVT 602
Y+T
Sbjct: 299 YIT 301
>SB_10516| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 381
Score = 32.3 bits (70), Expect = 0.43
Identities = 16/57 (28%), Positives = 25/57 (43%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 567
C KIN L R+ A+ Y+ + S YC +WGN S ++ + + Q
Sbjct: 201 CKKINSRISLLRRIAPFLTPAGAIHYYNACIHSQSLYCASVWGNCSQNLQLLLLRSQ 257
>SB_59383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 31.9 bits (69), Expect = 0.57
Identities = 15/46 (32%), Positives = 20/46 (43%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSS 600
C KIN L R+ A+ Y+ + S YC +WGN S
Sbjct: 659 CKKINSRISLLRRIAPFLTPAGAIHYYNACIHSQFLYCASVWGNCS 704
>SB_9316| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 169
Score = 31.9 bits (69), Expect = 0.57
Identities = 26/102 (25%), Positives = 44/102 (43%), Gaps = 3/102 (2%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK C
Sbjct: 64 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKGCA 123
Query: 560 RAMCNIHPLTSCKQFFQNI-IF*LYHPYIYKNVVCLLKSTHN 438
R + + K + + I IY +V L K+ +N
Sbjct: 124 RVILDKKWNAPSKPLLEELNIVPFDKRIIYLQLVLLFKAMNN 165
>SB_51695| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 31.1 bits (67), Expect = 0.99
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = -3
Query: 447 HPQLYKSCGEYCQFNTRYPTKLMLPSINTRYYHTNCYPMTIRIFNKIPNSIRDL 286
HP L Y TR+ T L P + YHT+ YP T R +P+ I +L
Sbjct: 23 HPILPLYHTSYYPCTTRHTTHL--PHVILPLYHTSYYPFTTRHTTHLPHVIAEL 74
>SB_11072| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 228
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 152 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 211
Query: 560 RAM 552
R +
Sbjct: 212 RVI 214
>SB_52988| Best HMM Match : RVT_1 (HMM E-Value=2.5)
Length = 277
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 199 NKISKRLGLLKRTKKFLSLKARTLFYHALIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 258
Query: 560 RAM 552
R +
Sbjct: 259 RVI 261
>SB_47851| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 893
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 815 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 874
Query: 560 RAM 552
R +
Sbjct: 875 RVI 877
>SB_43796| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 352
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 286 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 345
Query: 560 RAM 552
R +
Sbjct: 346 RVI 348
>SB_6463| Best HMM Match : RVT_1 (HMM E-Value=2.2e-13)
Length = 675
Score = 31.1 bits (67), Expect = 0.99
Identities = 18/63 (28%), Positives = 31/63 (49%), Gaps = 2/63 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 597 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 656
Query: 560 RAM 552
R +
Sbjct: 657 RVI 659
>SB_42669| Best HMM Match : Sorb (HMM E-Value=9.2)
Length = 347
Score = 30.7 bits (66), Expect = 1.3
Identities = 12/60 (20%), Positives = 27/60 (45%)
Frame = -1
Query: 746 DITCSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 567
D K++ A+ R+++ N T + Y+ + ++ YC +W N + + + Q
Sbjct: 166 DSLAKKVSSGIGAMKRISEFANQNTLVSIYNAIIQPHLNYCSEMWDTLGQCNTIRLQKLQ 225
>SB_16546| Best HMM Match : SH2 (HMM E-Value=6.4)
Length = 124
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 64 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 123
Query: 560 R 558
R
Sbjct: 124 R 124
>SB_1823| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 70
Score = 30.7 bits (66), Expect = 1.3
Identities = 21/53 (39%), Positives = 26/53 (49%), Gaps = 6/53 (11%)
Frame = +3
Query: 462 NNILVYIWMVQLKYYV------LEKLFTRSQRMNIAHGTNTLLLCNEHSIYVT 602
N I VY W QL Y L + QR N A+ T TLLL E+ ++VT
Sbjct: 15 NRITVYDWPSQLDYTTAAVGIRLNRKIMYFQRKNQANSTPTLLLLCENVLFVT 67
>SB_48446| Best HMM Match : Pkinase (HMM E-Value=1.2e-05)
Length = 228
Score = 30.7 bits (66), Expect = 1.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Frame = -1
Query: 734 SKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNS--SHINRVFIAQKQCV 561
+KI++ L R K +LK YH + + Y +WG++ HI+ + QK+C
Sbjct: 168 NKISKRLGLLKRTKKFLSLKARTLFYHSLIQPILDYGAIVWGSTKKQHIDDMVKFQKRCA 227
Query: 560 R 558
R
Sbjct: 228 R 228
>SB_50918| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1112
Score = 30.3 bits (65), Expect = 1.7
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = -1
Query: 740 TCSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLW 612
T SK N+ LW+ C+ K AY G V + Y +W
Sbjct: 766 TVSKANKILGLLWQNLHFCDTKAKEAAYVGLVRPLLEYASAIW 808
>SB_9319| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 3/63 (4%)
Frame = +3
Query: 423 HTIYIIVGAF*QTNNILVYIWM--VQLKYYVLEKLFTRSQ-RMNIAHGTNTLLLCNEHSI 593
H +YI + Q N +VYI M VQ+ +V+ Q M++ H T T + N H +
Sbjct: 156 HVVYITMTCV-QVNMHVVYITMTCVQVNMHVVYITMACVQVNMHVVHITMTCVQVNMHVV 214
Query: 594 YVT 602
Y+T
Sbjct: 215 YIT 217
>SB_54198| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 328
Score = 30.3 bits (65), Expect = 1.7
Identities = 18/54 (33%), Positives = 24/54 (44%)
Frame = -1
Query: 740 TCSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFI 579
T SK N+ L R CNLK AY G V + Y +W H +++ I
Sbjct: 253 TVSKANKILGLLRRNLHFCNLKAKEAAYVGLVRLLLEYASAIW--DPHTSKLII 304
>SB_39681| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 97
Score = 30.3 bits (65), Expect = 1.7
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Frame = -3
Query: 411 QFNTRYPTK--LMLPSINTRYYHTNCYPMTIRIFNKIPNSIRDLPLTQFKRKL 259
++N R K LP T Y N ++I+N++ + +DL + FK+KL
Sbjct: 37 KYNNRLSAKSSYTLPKARTNYGKVNIRFRGVQIWNELTQNDKDLNMKSFKKKL 89
>SB_52619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 492
Score = 29.5 bits (63), Expect = 3.0
Identities = 15/53 (28%), Positives = 29/53 (54%), Gaps = 2/53 (3%)
Frame = -3
Query: 411 QFNTRYPT-KLMLPSINTRYYHTNCYPMTIRIFNKIPNSIRDL-PLTQFKRKL 259
Q+N R L+ PS + Y H + Y + +N++PNS + +++F++ L
Sbjct: 426 QYNLRSSVHNLIQPSYQSLYMHNSFYYLISHFWNQLPNSAKAANSVSEFRKNL 478
>SB_51640| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 880
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQC 564
C K ++ L RL + + LQ Y + N+ YC +W ++ ++ Q++
Sbjct: 742 CKKASQKVGVLVRLRNLIPVDAKLQLYKSAILPNLTYCHTVWHFCKAADARKLERVQERA 801
Query: 563 VRAMCN 546
+RA+ N
Sbjct: 802 LRAIFN 807
>SB_46263| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
Length = 490
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQC 564
C K ++ L RL + + LQ Y + N+ YC +W ++ ++ Q++
Sbjct: 371 CKKASQKVGVLVRLRNLIPVDAKLQLYKSAILPNLTYCHTVWHFCKAADARKLERVQERA 430
Query: 563 VRAMCN 546
+RA+ N
Sbjct: 431 LRAIFN 436
>SB_1034| Best HMM Match : RVT_1 (HMM E-Value=2.2e-30)
Length = 558
Score = 29.1 bits (62), Expect = 4.0
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 2/66 (3%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQC 564
C K ++ L RL + + LQ Y + N+ YC +W ++ ++ Q++
Sbjct: 371 CKKASQKVGVLVRLRNLIPVDAKLQLYKSAILPNLTYCHTVWHFCKAADARKLERVQERA 430
Query: 563 VRAMCN 546
+RA+ N
Sbjct: 431 LRAIFN 436
>SB_54421| Best HMM Match : HipA_C (HMM E-Value=7.5)
Length = 248
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 97 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 156
Query: 557 AMCNIH-PLTSCKQFFQNI 504
+ N + P S + +++
Sbjct: 157 FVTNTYDPYASTTKLVKDL 175
>SB_26110| Best HMM Match : HipA_C (HMM E-Value=5.5)
Length = 210
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 27 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 86
Query: 557 AMCNIH-PLTSCKQFFQNI 504
+ N + P S + +++
Sbjct: 87 FVTNTYDPYASTTKLVKDL 105
>SB_25497| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 372
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 181 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 240
Query: 557 AMCNIH-PLTSCKQFFQNI 504
+ N + P S + +++
Sbjct: 241 FVTNTYDPYASTTKLVKDL 259
>SB_14729| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 315
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 132 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 191
Query: 557 AMCNIH-PLTSCKQFFQNI 504
+ N + P S + +++
Sbjct: 192 FVTNTYDPYASTTKLVKDL 210
>SB_4310| Best HMM Match : RVT_1 (HMM E-Value=5e-28)
Length = 570
Score = 29.1 bits (62), Expect = 4.0
Identities = 20/79 (25%), Positives = 33/79 (41%), Gaps = 3/79 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 387 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 446
Query: 557 AMCNIH-PLTSCKQFFQNI 504
+ N + P S + +++
Sbjct: 447 FVTNTYDPYASTTKLVKDL 465
>SB_11195| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 596
Score = 28.7 bits (61), Expect = 5.3
Identities = 13/44 (29%), Positives = 19/44 (43%)
Frame = -1
Query: 737 CSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGN 606
C KIN L R+ A+ Y+ + + YC +WGN
Sbjct: 100 CKKINSRISLLRRIAPFLTPAGAIHYYNACIHNQSLYCASVWGN 143
>SB_21705| Best HMM Match : Sorb (HMM E-Value=9.2)
Length = 169
Score = 28.3 bits (60), Expect = 7.0
Identities = 9/45 (20%), Positives = 21/45 (46%)
Frame = -1
Query: 701 RLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFIAQKQ 567
R+++ N T + Y+ + ++ YC +W N + + + Q
Sbjct: 3 RISEFANQNTLVSIYNAIIQPHLNYCSEMWDTLGQCNTIRLQKLQ 47
>SB_10258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 166
Score = 28.3 bits (60), Expect = 7.0
Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 2/64 (3%)
Frame = -1
Query: 731 KINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWG--NSSHINRVFIAQKQCVR 558
K N+ L R K C+ +AY V + Y P W + +NR+ QK R
Sbjct: 101 KANKVLGLLRRTLKPCSQLVKERAYFTLVRPILEYAAPAWNPYTDTDVNRLEQVQKNAAR 160
Query: 557 AMCN 546
+ N
Sbjct: 161 FVTN 164
>SB_34652| Best HMM Match : Ank (HMM E-Value=3.8e-34)
Length = 1330
Score = 27.9 bits (59), Expect = 9.2
Identities = 16/54 (29%), Positives = 24/54 (44%)
Frame = -1
Query: 740 TCSKINRFSYALWRLTKICNLKTALQAYHGYVASNIRYCIPLWGNSSHINRVFI 579
T SK N+ L R C+ K AY G+V + Y +W H +++ I
Sbjct: 1073 TVSKANKILGLLRRNLHFCDTKAKEAAYVGHVRPLLEYASAIW--DPHTSKLII 1124
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,001,522
Number of Sequences: 59808
Number of extensions: 458488
Number of successful extensions: 1040
Number of sequences better than 10.0: 42
Number of HSP's better than 10.0 without gapping: 901
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1034
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 2022185256
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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