Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00307
         (746 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AE014296-919|AAN11619.1|  975|Drosophila melanogaster CG32232-PA...    30   3.9  
U73809-1|AAC47328.2|  556|Drosophila melanogaster trithorax prot...    29   8.9  
BT011328-1|AAR96120.1|  350|Drosophila melanogaster SD28012p pro...    29   8.9  
AY051803-1|AAK93227.1|  556|Drosophila melanogaster LD31680p pro...    29   8.9  
AE014297-3588|AAN14010.1|  350|Drosophila melanogaster CG6677-PB...    29   8.9  
AE014297-3587|AAO41602.1|  556|Drosophila melanogaster CG6677-PC...    29   8.9  
AE014297-3586|AAF56320.2|  623|Drosophila melanogaster CG6677-PA...    29   8.9  

>AE014296-919|AAN11619.1|  975|Drosophila melanogaster CG32232-PA
            protein.
          Length = 975

 Score = 29.9 bits (64), Expect = 3.9
 Identities = 30/124 (24%), Positives = 50/124 (40%), Gaps = 9/124 (7%)
 Frame = -1

Query: 719  FSYALWRLTKICN--LKTALQAYHGY-VASNIRYCIPLWGNSSHINRVF------IAQKQ 567
            F   L R T++ N  +   LQ + GY V  ++R    LW N  H    F      + +K 
Sbjct: 695  FQRLLNRRTRLVNSYISGLLQEFQGYKVVRHLRSVFLLW-NYDHFRSEFEFFFEFLRRKH 753

Query: 566  CVRAMCNIHPLTSCKQFFQNIIF*LYHPYIYKNVVCLLKSTHNYINRVASTVNLIQDTLL 387
             V A   +  +  C+ F    +F +     +   +CL       +NR+ S     Q  ++
Sbjct: 754  LVEATNKLKHIVLCQDFTLGHMFKVCVTEAHPEFICLRVRNDTLLNRIISQQ---QMDMM 810

Query: 386  N*CY 375
            N C+
Sbjct: 811  NSCF 814


>U73809-1|AAC47328.2|  556|Drosophila melanogaster trithorax protein
           ASH2 protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 429 LPNTFKDRPLVKFKSHLYY 447


>BT011328-1|AAR96120.1|  350|Drosophila melanogaster SD28012p
           protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 223 LPNTFKDRPLVKFKSHLYY 241


>AY051803-1|AAK93227.1|  556|Drosophila melanogaster LD31680p
           protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 429 LPNTFKDRPLVKFKSHLYY 447


>AE014297-3588|AAN14010.1|  350|Drosophila melanogaster CG6677-PB,
           isoform B protein.
          Length = 350

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 223 LPNTFKDRPLVKFKSHLYY 241


>AE014297-3587|AAO41602.1|  556|Drosophila melanogaster CG6677-PC,
           isoform C protein.
          Length = 556

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 429 LPNTFKDRPLVKFKSHLYY 447


>AE014297-3586|AAF56320.2|  623|Drosophila melanogaster CG6677-PA,
           isoform A protein.
          Length = 623

 Score = 28.7 bits (61), Expect = 8.9
 Identities = 10/19 (52%), Positives = 14/19 (73%)
 Frame = -3

Query: 309 IPNSIRDLPLTQFKRKLYY 253
           +PN+ +D PL +FK  LYY
Sbjct: 496 LPNTFKDRPLVKFKSHLYY 514


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,073,342
Number of Sequences: 53049
Number of extensions: 644672
Number of successful extensions: 1035
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1012
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1035
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3396574665
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)