Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00306
         (549 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcript...    24   2.9  
DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.        23   6.6  
AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450 CY...    23   6.6  
AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein p...    23   6.6  

>AB090821-2|BAC57918.1| 1168|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1168

 Score = 24.2 bits (50), Expect = 2.9
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +3

Query: 3    ARAASHNAFKPRKNVHWKSAGRPAPPGKPQ 92
            ARAA++ A +P   V  +    P PP  P+
Sbjct: 1083 ARAAANEAAEPTGEVEEEEVSPPVPPIPPR 1112


>DQ974168-1|ABJ52808.1|  447|Anopheles gambiae serpin 9 protein.
          Length = 447

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 8/26 (30%), Positives = 15/26 (57%)
 Frame = +3

Query: 126 AITLKWAPRRTTEERLYEDIRSNVTG 203
           ++ L+WA  +TT    Y+  R ++ G
Sbjct: 104 SLNLQWADSKTTVYEAYDTARKSLRG 129


>AY193729-1|AAO62002.1|  499|Anopheles gambiae cytochrome P450
          CYPm3r9 protein.
          Length = 499

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 10/28 (35%), Positives = 14/28 (50%)
 Frame = +3

Query: 3  ARAASHNAFKPRKNVHWKSAGRPAPPGK 86
          A AA    +  RK  +W+  G P P G+
Sbjct: 13 ALAAGLYYYLDRKRSYWQDRGVPGPKGE 40


>AB097148-1|BAC82627.1|  357|Anopheles gambiae gag-like protein
           protein.
          Length = 357

 Score = 23.0 bits (47), Expect = 6.6
 Identities = 9/16 (56%), Positives = 12/16 (75%)
 Frame = -1

Query: 492 EPRNRRRRYTTKSDIE 445
           EPR   R+ TT+SD+E
Sbjct: 310 EPRTVTRKRTTESDVE 325


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 543,915
Number of Sequences: 2352
Number of extensions: 10050
Number of successful extensions: 23
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 50881347
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)