Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00305
         (782 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Y18418-1|CAB46271.1|  456|Homo sapiens erythrocyte cytosolic pro...    31   6.2  
BT007057-1|AAP35706.1|  456|Homo sapiens RuvB-like 1 (E. coli) p...    31   6.2  
BC012886-1|AAH12886.1|  456|Homo sapiens RuvB-like 1 (E. coli) p...    31   6.2  
BC002993-1|AAH02993.1|  456|Homo sapiens RuvB-like 1 (E. coli) p...    31   6.2  
AK222575-1|BAD96295.1|  456|Homo sapiens TATA binding protein in...    31   6.2  
AK222563-1|BAD96283.1|  456|Homo sapiens TATA binding protein in...    31   6.2  
AJ010058-1|CAA08986.1|  456|Homo sapiens Nuclear matrix protein ...    31   6.2  
AF380344-1|AAM45570.1|  456|Homo sapiens pontin 52 protein.            31   6.2  
AF099084-1|AAD04427.1|  456|Homo sapiens Pontin52 protein.             31   6.2  
AF070735-1|AAC77819.1|  456|Homo sapiens RuvB-like protein RUVBL...    31   6.2  
AB012122-1|BAA28169.1|  456|Homo sapiens TIP49 protein.                31   6.2  

>Y18418-1|CAB46271.1|  456|Homo sapiens erythrocyte cytosolic
           protein of 54 kDa, ECP-54 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>BT007057-1|AAP35706.1|  456|Homo sapiens RuvB-like 1 (E. coli)
           protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>BC012886-1|AAH12886.1|  456|Homo sapiens RuvB-like 1 (E. coli)
           protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>BC002993-1|AAH02993.1|  456|Homo sapiens RuvB-like 1 (E. coli)
           protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AK222575-1|BAD96295.1|  456|Homo sapiens TATA binding protein
           interacting protein 49 kDa variant protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AK222563-1|BAD96283.1|  456|Homo sapiens TATA binding protein
           interacting protein 49 kDa variant protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AJ010058-1|CAA08986.1|  456|Homo sapiens Nuclear matrix protein
           NMP238 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AF380344-1|AAM45570.1|  456|Homo sapiens pontin 52 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AF099084-1|AAD04427.1|  456|Homo sapiens Pontin52 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AF070735-1|AAC77819.1|  456|Homo sapiens RuvB-like protein RUVBL1
           protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


>AB012122-1|BAA28169.1|  456|Homo sapiens TIP49 protein.
          Length = 456

 Score = 30.7 bits (66), Expect = 6.2
 Identities = 13/20 (65%), Positives = 15/20 (75%)
 Frame = +2

Query: 11  FLDAKASAKILTQHSDKYMQ 70
           F DAK+SAKIL    DKYM+
Sbjct: 437 FYDAKSSAKILADQQDKYMK 456


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 96,646,249
Number of Sequences: 237096
Number of extensions: 1887194
Number of successful extensions: 9602
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 9556
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9600
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9534535578
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)