Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00304
(555 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical pr... 131 3e-31
U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical pr... 131 3e-31
U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical pr... 131 3e-31
AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical... 131 3e-31
AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical... 131 3e-31
U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily as... 128 3e-30
U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily ass... 128 3e-30
Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical pr... 127 5e-30
Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical p... 27 9.1
>U41009-4|AAA82280.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.1a protein.
Length = 404
Score = 131 bits (317), Expect = 3e-31
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+
Sbjct: 93 NVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 152
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 153 HELRRSGELEWVRPDSKTQVT 173
Score = 105 bits (252), Expect = 2e-23
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA VP RVHTVV+S QHS I+L+ LR E+ EKVIK VIPA +D++T+ H+NP
Sbjct: 175 EYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNP 234
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FIIGGP DAG G
Sbjct: 235 CGSFIIGGPMGDAGLTG 251
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 248 GLTGRKIIVDTYGGWGAHGG 267
>U41009-3|AAO44916.1| 353|Caenorhabditis elegans Hypothetical
protein C06E7.3b protein.
Length = 353
Score = 131 bits (317), Expect = 3e-31
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+
Sbjct: 42 NVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 101
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 102 HELRRSGELEWVRPDSKTQVT 122
Score = 105 bits (252), Expect = 2e-23
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA VP RVHTVV+S QHS I+L+ LR E+ EKVIK VIPA +D++T+ H+NP
Sbjct: 124 EYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNP 183
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FIIGGP DAG G
Sbjct: 184 CGSFIIGGPMGDAGLTG 200
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 197 GLTGRKIIVDTYGGWGAHGG 216
>U41009-2|AAA82279.1| 404|Caenorhabditis elegans Hypothetical
protein C06E7.3a protein.
Length = 404
Score = 131 bits (317), Expect = 3e-31
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+
Sbjct: 93 NVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 152
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 153 HELRRSGELEWVRPDSKTQVT 173
Score = 105 bits (252), Expect = 2e-23
Identities = 48/77 (62%), Positives = 57/77 (74%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA VP RVHTVV+S QHS I+L+ LR E+ EKVIK VIPA +D++T+ H+NP
Sbjct: 175 EYASEGGACVPLRVHTVVISTQHSPDISLDDLRKELIEKVIKAVIPANLIDDKTIYHLNP 234
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FIIGGP DAG G
Sbjct: 235 CGSFIIGGPMGDAGLTG 251
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 248 GLTGRKIIVDTYGGWGAHGG 267
>AL110479-11|CAB54357.1| 363|Caenorhabditis elegans Hypothetical
protein Y105C5B.12b protein.
Length = 363
Score = 131 bits (317), Expect = 3e-31
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+
Sbjct: 52 NVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 111
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 112 HELRRSGELEWVRPDSKTQVT 132
Score = 102 bits (244), Expect = 2e-22
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA +P RVHTVV+S QHS I+L+ LR E+ KVIK VIPA +D++T+ H+NP
Sbjct: 134 EYASEGGACIPLRVHTVVISTQHSPDISLDDLRKELIVKVIKAVIPANLIDDKTIYHLNP 193
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FIIGGP DAG G
Sbjct: 194 CGSFIIGGPMGDAGLTG 210
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 207 GLTGRKIIVDTYGGWGAHGG 226
>AL110479-10|CAD56249.1| 345|Caenorhabditis elegans Hypothetical
protein Y105C5B.12a protein.
Length = 345
Score = 131 bits (317), Expect = 3e-31
Identities = 57/81 (70%), Positives = 73/81 (90%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ ++VGAGDQG+MFGYATDETEE MPLT++L+HKLN+K+
Sbjct: 34 NVLVALEQQSPEIAAGVHVDKDSDDVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNRKL 93
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 94 HELRRSGELEWVRPDSKTQVT 114
Score = 102 bits (244), Expect = 2e-22
Identities = 46/77 (59%), Positives = 56/77 (72%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA +P RVHTVV+S QHS I+L+ LR E+ KVIK VIPA +D++T+ H+NP
Sbjct: 116 EYASEGGACIPLRVHTVVISTQHSPDISLDDLRKELIVKVIKAVIPANLIDDKTIYHLNP 175
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FIIGGP DAG G
Sbjct: 176 CGSFIIGGPMGDAGLTG 192
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 189 GLTGRKIIVDTYGGWGAHGG 208
>U56963-10|AAM97949.1| 353|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform b protein.
Length = 353
Score = 128 bits (309), Expect = 3e-30
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+
Sbjct: 42 NVLVALEQQSPEIAAGVHVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKL 101
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 102 HELRRSGELEWVRPDSKTQVT 122
Score = 101 bits (241), Expect = 5e-22
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA VP RVHTVV+S QHS I+LE LR E+ EKVIK VIP +D TV H+NP
Sbjct: 124 EYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNP 183
Query: 437 CGLFIIGGPQSDAGPDG 487
CG F++GGP DAG G
Sbjct: 184 CGSFVVGGPMGDAGLTG 200
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 197 GLTGRKIIVDTYGGWGAHGG 216
>U56963-9|AAB38126.2| 404|Caenorhabditis elegans Temporarily
assigned gene nameprotein 32, isoform a protein.
Length = 404
Score = 128 bits (309), Expect = 3e-30
Identities = 57/81 (70%), Positives = 71/81 (87%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH +++ +VGAGDQG+MFGYATDETEE MPLT++L+HKLN K+
Sbjct: 93 NVLVALEQQSPEIAAGVHVDKDIADVGAGDQGIMFGYATDETEEAMPLTLLLSHKLNYKL 152
Query: 192 EELRRNGEFWWARPDSKTQVT 254
ELRR+GE W RPDSKTQVT
Sbjct: 153 HELRRSGELEWVRPDSKTQVT 173
Score = 101 bits (241), Expect = 5e-22
Identities = 47/77 (61%), Positives = 54/77 (70%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GGA VP RVHTVV+S QHS I+LE LR E+ EKVIK VIP +D TV H+NP
Sbjct: 175 EYSSEGGACVPLRVHTVVISTQHSPDISLEDLRKELIEKVIKVVIPGNLIDNDTVYHLNP 234
Query: 437 CGLFIIGGPQSDAGPDG 487
CG F++GGP DAG G
Sbjct: 235 CGSFVVGGPMGDAGLTG 251
Score = 30.7 bits (66), Expect = 0.74
Identities = 14/20 (70%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
GLTGRKIIVDT G G G
Sbjct: 248 GLTGRKIIVDTYGGWGAHGG 267
>Z81485-1|CAB03975.1| 403|Caenorhabditis elegans Hypothetical
protein C49F5.1 protein.
Length = 403
Score = 127 bits (307), Expect = 5e-30
Identities = 55/81 (67%), Positives = 71/81 (87%)
Frame = +3
Query: 12 SVMLALDQQSPNIAAGVHENRNDEEVGAGDQGLMFGYATDETEECMPLTVVLAHKLNQKI 191
+V++AL+QQSP IAAGVH N++ E+VGAGDQG+MFGYATDETEE MPLT++L+HK+N ++
Sbjct: 92 NVLVALEQQSPEIAAGVHVNKDGEDVGAGDQGIMFGYATDETEETMPLTLILSHKINAEL 151
Query: 192 EELRRNGEFWWARPDSKTQVT 254
+LRRNG W RPDSK+QVT
Sbjct: 152 HKLRRNGTLPWVRPDSKSQVT 172
Score = 105 bits (251), Expect = 3e-23
Identities = 50/77 (64%), Positives = 55/77 (71%)
Frame = +2
Query: 257 EYVFAGGATVPQRVHTVVVSLQHSEKITLETLRDEIREKVIKEVIPAQYLDERTVIHINP 436
EY GAT+P RVHTVVVS QHS +TLE LR+ I VIK+VIPA LDE TV HINP
Sbjct: 174 EYESRHGATIPLRVHTVVVSTQHSPDVTLEKLRETILADVIKKVIPASLLDESTVFHINP 233
Query: 437 CGLFIIGGPQSDAGPDG 487
CG FI+GGP DAG G
Sbjct: 234 CGTFIVGGPMGDAGVTG 250
Score = 29.5 bits (63), Expect = 1.7
Identities = 13/20 (65%), Positives = 14/20 (70%)
Frame = +3
Query: 477 GLTGRKIIVDTMAGGGRTAG 536
G+TGRKIIVDT G G G
Sbjct: 247 GVTGRKIIVDTYGGWGAHGG 266
>Z79603-10|CAI79233.1| 224|Caenorhabditis elegans Hypothetical
protein M163.11 protein.
Length = 224
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/39 (33%), Positives = 20/39 (51%)
Frame = -1
Query: 420 TVLSSRYCAGITSLMTFSLISSRKVSRVIFSECCSDTTT 304
T + ++YCA SL + S SS S S C+D+ +
Sbjct: 154 TAIKTQYCAATCSLCSSSSDSSSSSSTASTSSSCTDSAS 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,509,571
Number of Sequences: 27780
Number of extensions: 292523
Number of successful extensions: 965
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 897
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 965
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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