Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00302
         (654 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles ...    25   2.8  
AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.     24   3.7  
AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.    23   6.4  
AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA topoi...    23   6.4  
AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450 pr...    23   8.4  

>M93691-1|AAA29366.1|  574|Anopheles gambiae protein ( Anopheles
           gambiae RT2 retroposon. ).
          Length = 574

 Score = 24.6 bits (51), Expect = 2.8
 Identities = 15/35 (42%), Positives = 19/35 (54%)
 Frame = +1

Query: 493 HRDCETRPIDPLV*RVFSKRCQKSYHRDNWLVAAK 597
           +RD  TR IDPL  R  S  C+ S    + L AA+
Sbjct: 52  YRDGSTREIDPLGARATSVDCRTSLAPCSKLFAAE 86


>AJ130951-1|CAA10260.1|  189|Anopheles gambiae SG3 protein protein.
          Length = 189

 Score = 24.2 bits (50), Expect = 3.7
 Identities = 8/15 (53%), Positives = 12/15 (80%)
 Frame = -3

Query: 268 VRPPIYRPRTASAQP 224
           +RPP +RP T++A P
Sbjct: 109 LRPPFHRPTTSTAAP 123


>AY745229-1|AAU93509.1|   56|Anopheles gambiae glutaredoxin protein.
          Length = 56

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 11/24 (45%), Positives = 16/24 (66%), Gaps = 4/24 (16%)
 Frame = +2

Query: 341 SGSRTLP----GGEFDWGGTSVKE 400
           +G+RT+P    GG F  GGT +K+
Sbjct: 21  TGARTVPRVFIGGNFVGGGTDIKK 44


>AJ439353-8|CAD27930.1| 1039|Anopheles gambiae putative DNA
           topoisomerase protein.
          Length = 1039

 Score = 23.4 bits (48), Expect = 6.4
 Identities = 9/16 (56%), Positives = 10/16 (62%)
 Frame = -1

Query: 387 VPPQSNSPPGSVLEPD 340
           +PP SNS P S   PD
Sbjct: 868 MPPSSNSSPSSYPSPD 883


>AY095933-1|AAM34435.1|  505|Anopheles gambiae cytochrome P450
           protein.
          Length = 505

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/26 (30%), Positives = 14/26 (53%)
 Frame = +1

Query: 166 DRFARSSLKNHYFHCFITYSVGRKRC 243
           DRFA ++    + H F+ +  G + C
Sbjct: 425 DRFALAATHARHTHAFLPFGDGPRNC 450


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 705,208
Number of Sequences: 2352
Number of extensions: 15105
Number of successful extensions: 28
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 28
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64814025
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)