Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00302
         (654 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for MG...    74   5e-13
BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and homeob...    31   2.7  
AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZH...    31   2.7  
AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.     31   2.7  
X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for ...    31   3.6  
M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.                    31   3.6  
BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1,...    31   3.6  
AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of compl...    31   3.6  

>BC114377-1|AAI14378.1|   44|Homo sapiens Unknown (protein for
           MGC:134704) protein.
          Length = 44

 Score = 73.7 bits (173), Expect = 5e-13
 Identities = 33/37 (89%), Positives = 34/37 (91%)
 Frame = -3

Query: 649 MIGRADIEGSKSNVAMNAWLPQASYPCGNFSGTSC*K 539
           MIGRADIEGSKS+VAMNAW PQASYPCGNFS TSC K
Sbjct: 1   MIGRADIEGSKSDVAMNAWPPQASYPCGNFSDTSCLK 37


>BC042145-1|AAH42145.1|  837|Homo sapiens zinc fingers and
           homeoboxes 2 protein.
          Length = 837

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = -1

Query: 417 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNXDERFRHVTTLHAWNETPCARRFIDRAP 238
           LG     LT V   S +   S +    AGV N  ++ R + T  A  E    R  I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPK--RPHIAQVP 427

Query: 237 LPPNRVSNETMKVVVFQRRSRETISHL 157
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB083653-1|BAC76615.1|  837|Homo sapiens transcription factor ZHX2
           protein.
          Length = 837

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = -1

Query: 417 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNXDERFRHVTTLHAWNETPCARRFIDRAP 238
           LG     LT V   S +   S +    AGV N  ++ R + T  A  E    R  I + P
Sbjct: 371 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPK--RPHIAQVP 427

Query: 237 LPPNRVSNETMKVVVFQRRSRETISHL 157
            PP +V+N  +     +++++E I+HL
Sbjct: 428 EPPPKVANPPLTPASDRKKTKEQIAHL 454


>AB020661-1|BAA74877.2|  868|Homo sapiens KIAA0854 protein protein.
          Length = 868

 Score = 31.5 bits (68), Expect = 2.7
 Identities = 26/87 (29%), Positives = 41/87 (47%)
 Frame = -1

Query: 417 LGHLRYSLTDVPPQSNSPPGSVLEPDHAGVLNXDERFRHVTTLHAWNETPCARRFIDRAP 238
           LG     LT V   S +   S +    AGV N  ++ R + T  A  E    R  I + P
Sbjct: 402 LGQTSLVLTQVTSGSTTVSCSPITLAVAGVTNHGQK-RPLVTPQAAPEPK--RPHIAQVP 458

Query: 237 LPPNRVSNETMKVVVFQRRSRETISHL 157
            PP +V+N  +     +++++E I+HL
Sbjct: 459 EPPPKVANPPLTPASDRKKTKEQIAHL 485


>X04701-1|CAA28407.1|  705|Homo sapiens protein ( Human mRNA for
           complement component C1r. ).
          Length = 705

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>M14058-1|AAA51851.1|  705|Homo sapiens C1R protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>BC035220-1|AAH35220.1|  705|Homo sapiens complement component 1, r
           subcomponent protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


>AB083037-1|BAC19850.2|  705|Homo sapiens r subcomponent of
           complement component 1 protein.
          Length = 705

 Score = 31.1 bits (67), Expect = 3.6
 Identities = 15/37 (40%), Positives = 21/37 (56%)
 Frame = +1

Query: 13  D*RDSHCPYLLSSETTAKGTGLGESAGKEDPVELDSS 123
           D +  HCPY    +  A G  +GE  GK+ P +LD+S
Sbjct: 244 DHQQVHCPYD-QLQIYANGKNIGEFCGKQRPPDLDTS 279


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,028,599
Number of Sequences: 237096
Number of extensions: 2320284
Number of successful extensions: 5726
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5289
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5721
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7310122300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)