Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00301
(748 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole... 124 2e-27
UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6 ... 123 4e-27
UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n... 112 1e-23
UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;... 109 9e-23
UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4; D... 99 6e-20
UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1; E... 85 2e-15
UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10; Proteobac... 79 2e-13
UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein; ... 78 2e-13
UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2; Synec... 78 3e-13
UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein; ... 78 3e-13
UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59; ... 77 4e-13
UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhl... 77 4e-13
UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=... 77 5e-13
UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11; Cyano... 77 6e-13
UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3; Sphingomonad... 77 6e-13
UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1; ... 77 6e-13
UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=... 77 6e-13
UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA heli... 77 6e-13
UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep: ... 77 6e-13
UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2; Planct... 76 8e-13
UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1; Flavob... 76 1e-12
UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1; Metha... 75 2e-12
UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3; Clostr... 75 2e-12
UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein; ... 75 2e-12
UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|R... 75 2e-12
UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128, ... 75 2e-12
UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia... 75 2e-12
UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=... 75 2e-12
UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein; ... 74 3e-12
UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1; Blasto... 74 3e-12
UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX... 74 3e-12
UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellu... 74 4e-12
UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=... 74 4e-12
UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=... 74 4e-12
UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2; Alphaproteob... 74 4e-12
UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2; Salin... 74 4e-12
UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein; ... 74 4e-12
UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whol... 73 6e-12
UniRef50_Q9S531 Cluster: DEAD-box protein; n=4; Cystobacterineae... 73 6e-12
UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep... 73 6e-12
UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15; Cyan... 73 8e-12
UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1; A... 73 8e-12
UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=... 73 8e-12
UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA hel... 73 8e-12
UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX... 73 8e-12
UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like ... 73 1e-11
UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box heli... 73 1e-11
UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=... 73 1e-11
UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;... 73 1e-11
UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6; H... 72 1e-11
UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=... 72 1e-11
UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein; ... 72 1e-11
UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein; ... 72 1e-11
UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 1e-11
UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX... 72 1e-11
UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: R... 72 2e-11
UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13; Prot... 72 2e-11
UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=... 72 2e-11
UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 72 2e-11
UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n... 71 2e-11
UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 71 2e-11
UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 71 2e-11
UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein; ... 71 2e-11
UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA helicas... 71 2e-11
UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular organ... 71 2e-11
UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=... 71 2e-11
UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein; ... 71 3e-11
UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=... 71 3e-11
UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila melanogaster|... 71 3e-11
UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1; ... 71 3e-11
UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1; Acido... 71 4e-11
UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytoph... 71 4e-11
UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA h... 71 4e-11
UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1; Syntro... 71 4e-11
UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, wh... 71 4e-11
UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13; ... 71 4e-11
UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;... 71 4e-11
UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 70 5e-11
UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein; ... 70 5e-11
UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2; ... 70 5e-11
UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, wh... 70 5e-11
UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146, w... 70 5e-11
UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3; Thermo... 70 5e-11
UniRef50_A5E2I8 Cluster: ATP-dependent rRNA helicase SPB4; n=3; ... 70 5e-11
UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;... 70 5e-11
UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;... 70 5e-11
UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A... 70 5e-11
UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box A... 70 7e-11
UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=... 70 7e-11
UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1; Pseud... 70 7e-11
UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific fo... 70 7e-11
UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2; s... 70 7e-11
UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2; ... 70 7e-11
UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gamb... 70 7e-11
UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3; Thermopro... 70 7e-11
UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5; Firmic... 69 9e-11
UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 69 9e-11
UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE; ... 69 9e-11
UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1; Mesopl... 69 9e-11
UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1; Neptun... 69 9e-11
UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein; ... 69 9e-11
UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1; Planct... 69 9e-11
UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG098... 69 9e-11
UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=... 69 9e-11
UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, wh... 69 9e-11
UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4; Ascomy... 69 9e-11
UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 69 9e-11
UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 69 9e-11
UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1; Mycopl... 69 1e-10
UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6; Prot... 69 1e-10
UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein; ... 69 1e-10
UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=... 69 1e-10
UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine... 69 1e-10
UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whol... 69 2e-10
UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2; Glucon... 69 2e-10
UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia psych... 69 2e-10
UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein; ... 69 2e-10
UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein; ... 69 2e-10
UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3; ... 69 2e-10
UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;... 69 2e-10
UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX... 69 2e-10
UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1; P... 69 2e-10
UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide ... 68 2e-10
UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2; ... 68 2e-10
UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3; Euk... 68 2e-10
UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3; Aconoidasi... 68 2e-10
UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain co... 68 2e-10
UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 68 2e-10
UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III; n=... 68 2e-10
UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=... 68 3e-10
UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=... 68 3e-10
UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1; ... 68 3e-10
UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7; Trypanosom... 68 3e-10
UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Duge... 68 3e-10
UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A fami... 68 3e-10
UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX... 68 3e-10
UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family pr... 67 4e-10
UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellu... 67 4e-10
UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12; Alpha... 67 4e-10
UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVL... 67 4e-10
UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1; ... 67 4e-10
UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;... 67 4e-10
UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9; Eu... 67 4e-10
UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;... 67 4e-10
UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;... 67 4e-10
UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 67 4e-10
UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog; ... 67 4e-10
UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA... 67 5e-10
UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome sh... 67 5e-10
UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10; ... 67 5e-10
UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28; Alphaproteo... 67 5e-10
UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=... 67 5e-10
UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 67 5e-10
UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein; ... 67 5e-10
UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=... 67 5e-10
UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein; ... 67 5e-10
UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein; ... 67 5e-10
UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia girella... 67 5e-10
UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydb... 67 5e-10
UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;... 67 5e-10
UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;... 67 5e-10
UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2; C... 67 5e-10
UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2; ... 67 5e-10
UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;... 66 7e-10
UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD (Asp-... 66 7e-10
UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12; Clost... 66 7e-10
UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 7e-10
UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 66 7e-10
UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3; Deltap... 66 7e-10
UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 7e-10
UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase... 66 7e-10
UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD b... 66 7e-10
UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=... 66 7e-10
UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 66 7e-10
UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1; ... 66 7e-10
UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8; Aconoidasida|... 66 7e-10
UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein; ... 66 7e-10
UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=... 66 7e-10
UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1; ... 66 7e-10
UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5; ... 66 7e-10
UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 66 7e-10
UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=... 66 9e-10
UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=... 66 9e-10
UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putati... 66 9e-10
UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box fa... 66 9e-10
UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular o... 66 9e-10
UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2; ... 66 9e-10
UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 66 9e-10
UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n... 66 9e-10
UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia girella... 66 9e-10
UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, wh... 66 9e-10
UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1; uncult... 66 9e-10
UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;... 66 9e-10
UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;... 66 9e-10
UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=19... 66 9e-10
UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1; S... 66 9e-10
UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase C... 66 1e-09
UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3; Altero... 66 1e-09
UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1; Idioma... 66 1e-09
UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase, C-term... 66 1e-09
UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DE... 66 1e-09
UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;... 66 1e-09
UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein; ... 66 1e-09
UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-... 66 1e-09
UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyosteli... 66 1e-09
UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100, w... 66 1e-09
UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=3... 66 1e-09
UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4; A... 66 1e-09
UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena t... 65 2e-09
UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10; ... 65 2e-09
UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 2e-09
UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2; Planct... 65 2e-09
UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2; Frank... 65 2e-09
UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 65 2e-09
UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase pro... 65 2e-09
UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase, DE... 65 2e-09
UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 65 2e-09
UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=... 65 2e-09
UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Sl... 65 2e-09
UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,... 65 2e-09
UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68; ... 65 2e-09
UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein; ... 65 2e-09
UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p; ... 65 2e-09
UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable A... 65 2e-09
UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1; Ent... 65 2e-09
UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box polyp... 65 2e-09
UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|R... 65 2e-09
UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14; ... 65 2e-09
UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinek... 65 2e-09
UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2; ... 65 2e-09
UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3; ... 65 2e-09
UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqf... 65 2e-09
UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;... 65 2e-09
UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep... 64 3e-09
UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20; Franc... 64 3e-09
UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein; ... 64 3e-09
UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y chromosome-rela... 64 3e-09
UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella ve... 64 3e-09
UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;... 64 3e-09
UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;... 64 3e-09
UniRef50_P42305 Cluster: ATP-dependent RNA helicase dbpA; n=9; F... 64 3e-09
UniRef50_Q2H2J1 Cluster: ATP-dependent RNA helicase DBP4; n=14; ... 64 3e-09
UniRef50_Q4IF76 Cluster: ATP-dependent RNA helicase DBP2; n=4; F... 64 3e-09
UniRef50_UPI0000D5571E Cluster: PREDICTED: similar to CG5800-PA;... 64 3e-09
UniRef50_Q4T4A9 Cluster: Chromosome undetermined SCAF9757, whole... 64 3e-09
UniRef50_Q9KLE2 Cluster: ATP-dependent RNA helicase DeaD; n=35; ... 64 3e-09
UniRef50_Q725W5 Cluster: ATP-dependent RNA helicase, DEAD/DEAH f... 64 3e-09
UniRef50_Q6MR64 Cluster: ATP-dependent RNA helicase; n=5; cellul... 64 3e-09
UniRef50_Q5ZT20 Cluster: ATP-dependent RNA helicase; n=4; Legion... 64 3e-09
UniRef50_Q5NZY2 Cluster: ATP-dependent RNA helicase DeaD; n=18; ... 64 3e-09
UniRef50_Q30P62 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 64 3e-09
UniRef50_Q2BIX8 Cluster: Probable ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q0LVA0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 64 3e-09
UniRef50_A0V009 Cluster: DEAD/DEAH box helicase-like; n=1; Clost... 64 3e-09
UniRef50_A0M3C7 Cluster: RhlE-like DEAD box family ATP-dependent... 64 3e-09
UniRef50_Q9LKL6 Cluster: DEAD box protein P68; n=5; Viridiplanta... 64 3e-09
UniRef50_Q00VZ7 Cluster: DEAD/DEAH box helicase, putative; n=2; ... 64 3e-09
UniRef50_A7QKJ8 Cluster: Chromosome chr2 scaffold_112, whole gen... 64 3e-09
UniRef50_A4S6M9 Cluster: Predicted protein; n=3; Ostreococcus|Re... 64 3e-09
UniRef50_Q9VXW2 Cluster: CG6227-PA; n=11; Coelomata|Rep: CG6227-... 64 3e-09
UniRef50_Q8MYE9 Cluster: Similar to Mus musculus (Mouse). DEAD-b... 64 3e-09
UniRef50_Q4N4B1 Cluster: ATP-dependent RNA helicase, putative; n... 64 3e-09
UniRef50_Q17II7 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_Q16W98 Cluster: DEAD box ATP-dependent RNA helicase; n=... 64 3e-09
UniRef50_A7APE7 Cluster: DEAD/DEAH box helicase domain containin... 64 3e-09
UniRef50_A2DHK0 Cluster: DEAD/DEAH box helicase family protein; ... 64 3e-09
UniRef50_P09052 Cluster: ATP-dependent RNA helicase vasa; n=5; E... 64 3e-09
UniRef50_Q09903 Cluster: ATP-dependent RNA helicase drs1; n=1; S... 64 3e-09
UniRef50_A5DC85 Cluster: ATP-dependent RNA helicase DBP9; n=4; S... 64 3e-09
UniRef50_Q81LV0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 64 5e-09
UniRef50_Q4PNH7 Cluster: Putative cold-shock dead-box protein A;... 64 5e-09
UniRef50_Q11UI8 Cluster: DEAD box-related helicase; n=3; Sphingo... 64 5e-09
UniRef50_A6Q8Y9 Cluster: ATP-dependent RNA helicase, DEAD-box fa... 64 5e-09
UniRef50_Q965K2 Cluster: Putative uncharacterized protein; n=2; ... 64 5e-09
UniRef50_Q4W7T8 Cluster: VASA RNA helicase; n=1; Artemia francis... 64 5e-09
UniRef50_A4V6K8 Cluster: Putative RNA helicase protein; n=1; Dug... 64 5e-09
UniRef50_A3FQ46 Cluster: U5 snRNP 100 kD protein, putative; n=2;... 64 5e-09
UniRef50_Q6K7R9 Cluster: DEAD-box ATP-dependent RNA helicase 48;... 64 5e-09
UniRef50_O22907 Cluster: DEAD-box ATP-dependent RNA helicase 24;... 64 5e-09
UniRef50_A5DUB2 Cluster: ATP-dependent RNA helicase MAK5; n=5; S... 64 5e-09
UniRef50_Q4P7M1 Cluster: ATP-dependent RNA helicase DBP9; n=2; U... 64 5e-09
UniRef50_UPI00006CF9CE Cluster: DEAD/DEAH box helicase family pr... 63 6e-09
UniRef50_UPI00006CD03A Cluster: P68-like protein, putative; n=1;... 63 6e-09
UniRef50_Q5VQL1-2 Cluster: Isoform 2 of Q5VQL1 ; n=2; Magnolioph... 63 6e-09
UniRef50_Q4SP80 Cluster: Chromosome 15 SCAF14542, whole genome s... 63 6e-09
UniRef50_Q6APU7 Cluster: Related to ATP-dependent RNA helicase; ... 63 6e-09
UniRef50_A6T3R2 Cluster: ATP-dependent RNA helicase; n=52; cellu... 63 6e-09
UniRef50_A6G4U7 Cluster: DEAD/DEAH box helicase; n=2; Plesiocyst... 63 6e-09
UniRef50_A6DIU5 Cluster: Probable ATP dependent RNA helicase; n=... 63 6e-09
UniRef50_A4BBH5 Cluster: Probable ATP-dependent RNA helicase; n=... 63 6e-09
UniRef50_A0RP33 Cluster: Putative ATP-dependent RNA helicase Rhl... 63 6e-09
UniRef50_A7P0R7 Cluster: Chromosome chr19 scaffold_4, whole geno... 63 6e-09
UniRef50_A4S3A0 Cluster: Predicted protein; n=2; Ostreococcus|Re... 63 6e-09
UniRef50_A4S294 Cluster: Predicted protein; n=1; Ostreococcus lu... 63 6e-09
UniRef50_Q8SY39 Cluster: LD28101p; n=3; Diptera|Rep: LD28101p - ... 63 6e-09
UniRef50_Q54CD8 Cluster: Putative RNA helicase; n=2; Dictyosteli... 63 6e-09
UniRef50_Q38DS7 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 63 6e-09
UniRef50_A2EVI2 Cluster: DEAD/DEAH box helicase family protein; ... 63 6e-09
UniRef50_Q55RL6 Cluster: Putative uncharacterized protein; n=2; ... 63 6e-09
UniRef50_Q2GSC7 Cluster: Putative uncharacterized protein; n=6; ... 63 6e-09
UniRef50_Q7A4G0 Cluster: Probable DEAD-box ATP-dependent RNA hel... 63 6e-09
UniRef50_P44701 Cluster: ATP-dependent RNA helicase srmB homolog... 63 6e-09
UniRef50_Q8SQM5 Cluster: ATP-dependent RNA helicase eIF4A; n=1; ... 63 6e-09
UniRef50_P44586 Cluster: Cold-shock DEAD box protein A homolog; ... 63 6e-09
UniRef50_P20448 Cluster: ATP-dependent RNA helicase DBP4; n=13; ... 63 6e-09
UniRef50_Q4P5U4 Cluster: ATP-dependent RNA helicase DBP4; n=1; U... 63 6e-09
UniRef50_Q2BP56 Cluster: Putative ATP-dependent RNA helicase; n=... 63 8e-09
UniRef50_Q1N6E2 Cluster: ATP-dependent RNA helicase; n=1; Oceano... 63 8e-09
UniRef50_A1WB42 Cluster: DEAD/DEAH box helicase domain protein; ... 63 8e-09
UniRef50_A5BHG9 Cluster: Putative uncharacterized protein; n=1; ... 63 8e-09
UniRef50_A2WLP5 Cluster: Putative uncharacterized protein; n=3; ... 63 8e-09
UniRef50_Q9V3C4 Cluster: CG6539-PA; n=1; Drosophila melanogaster... 63 8e-09
UniRef50_Q4QIQ9 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 63 8e-09
UniRef50_Q4Q2Z6 Cluster: ATP-dependent RNA helicase, putative; n... 63 8e-09
UniRef50_A7S2R2 Cluster: Predicted protein; n=5; Eumetazoa|Rep: ... 63 8e-09
UniRef50_Q5KAW6 Cluster: RNA helicase, putative; n=2; Filobasidi... 63 8e-09
UniRef50_Q9ZRZ8 Cluster: DEAD-box ATP-dependent RNA helicase 28;... 63 8e-09
UniRef50_Q9FLB0 Cluster: DEAD-box ATP-dependent RNA helicase 18;... 63 8e-09
UniRef50_Q6CCZ1 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 8e-09
UniRef50_Q4IP34 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 63 8e-09
UniRef50_Q86XP3 Cluster: ATP-dependent RNA helicase DDX42; n=47;... 63 8e-09
UniRef50_P20449 Cluster: ATP-dependent RNA helicase DBP5; n=23; ... 63 8e-09
UniRef50_Q9VHP0 Cluster: ATP-dependent RNA helicase bel; n=4; Pr... 63 8e-09
UniRef50_Q3AFI3 Cluster: ATP-dependent RNA helicase, DEAD box fa... 62 1e-08
UniRef50_Q2S6I0 Cluster: ATP-dependent RNA helicase; n=1; Salini... 62 1e-08
UniRef50_Q11WD3 Cluster: Possible ATP-dependent RNA helicase; n=... 62 1e-08
UniRef50_Q9VX34 Cluster: CG5800-PA; n=2; Sophophora|Rep: CG5800-... 62 1e-08
UniRef50_Q7QQ49 Cluster: GLP_139_12217_14094; n=1; Giardia lambl... 62 1e-08
UniRef50_Q7PMT7 Cluster: ENSANGP00000010668; n=1; Anopheles gamb... 62 1e-08
UniRef50_Q54DN9 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q385S0 Cluster: ATP-dependent DEAD/H RNA helicase, puta... 62 1e-08
UniRef50_A7AWS5 Cluster: DEAD/DEAH box helicase and helicase con... 62 1e-08
UniRef50_A5KB15 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_A0D315 Cluster: Chromosome undetermined scaffold_36, wh... 62 1e-08
UniRef50_A0BEU9 Cluster: Chromosome undetermined scaffold_102, w... 62 1e-08
UniRef50_P21507 Cluster: ATP-dependent RNA helicase srmB; n=82; ... 62 1e-08
UniRef50_Q5N7W4 Cluster: DEAD-box ATP-dependent RNA helicase 30;... 62 1e-08
UniRef50_Q4PFD9 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 62 1e-08
UniRef50_Q26696 Cluster: Putative DEAD-box RNA helicase HEL64; n... 62 1e-08
UniRef50_Q4P9P3 Cluster: ATP-dependent RNA helicase DRS1; n=1; U... 62 1e-08
UniRef50_Q7S6F3 Cluster: ATP-dependent RNA helicase dbp-9; n=14;... 62 1e-08
UniRef50_UPI00015B5BD1 Cluster: PREDICTED: similar to RE48840p; ... 62 1e-08
UniRef50_UPI00015B5BA9 Cluster: PREDICTED: similar to RE48840p; ... 62 1e-08
UniRef50_UPI0001555979 Cluster: PREDICTED: similar to ATP-depend... 62 1e-08
UniRef50_Q4RK69 Cluster: Chromosome 2 SCAF15032, whole genome sh... 62 1e-08
UniRef50_A5UZK3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A4SWL3 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_A0JYP4 Cluster: DEAD/DEAH box helicase domain protein; ... 62 1e-08
UniRef50_Q54CB8 Cluster: Putative uncharacterized protein; n=1; ... 62 1e-08
UniRef50_Q4Q552 Cluster: ATP-dependent RNA helicase, putative; n... 62 1e-08
UniRef50_Q1AG34 Cluster: Ded1-like DEAD-box RNA helicase; n=1; C... 62 1e-08
UniRef50_A3QMD4 Cluster: Putative uncharacterized protein mel-46... 62 1e-08
UniRef50_A2DP01 Cluster: DEAD/DEAH box helicase family protein; ... 62 1e-08
UniRef50_Q6KZC2 Cluster: ATP-dependent RNA helicase; n=1; Picrop... 62 1e-08
UniRef50_Q3EBD3 Cluster: DEAD-box ATP-dependent RNA helicase 41;... 62 1e-08
UniRef50_Q5T1V6 Cluster: Probable ATP-dependent RNA helicase DDX... 62 1e-08
UniRef50_Q2H0R2 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 62 1e-08
UniRef50_Q5GZA1 Cluster: ATP-dependent RNA helicase; n=6; Xantho... 62 2e-08
UniRef50_Q41FS1 Cluster: IMP dehydrogenase/GMP reductase:Helicas... 62 2e-08
UniRef50_Q12QV2 Cluster: DEAD/DEAH box helicase-like protein; n=... 62 2e-08
UniRef50_Q0HLM7 Cluster: DEAD/DEAH box helicase domain protein; ... 62 2e-08
UniRef50_Q013Q9 Cluster: DEAD/DEAH box helicase, putative; n=7; ... 62 2e-08
UniRef50_Q55CP6 Cluster: Putative uncharacterized protein; n=1; ... 62 2e-08
UniRef50_Q4UE18 Cluster: RNA helicase, putative; n=2; Theileria|... 62 2e-08
UniRef50_Q4UBP8 Cluster: RNA helicase, putative; n=4; Eukaryota|... 62 2e-08
UniRef50_Q4QAV6 Cluster: ATP-dependent RNA helicase, putative; n... 62 2e-08
UniRef50_Q4MYL1 Cluster: ATP-dependent RNA helicase, putative; n... 62 2e-08
UniRef50_Q2PZC2 Cluster: Vasa protein; n=3; Apidae|Rep: Vasa pro... 62 2e-08
UniRef50_Q22T03 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_A2D7F9 Cluster: DEAD/DEAH box helicase family protein; ... 62 2e-08
UniRef50_Q9NVP1 Cluster: ATP-dependent RNA helicase DDX18; n=24;... 62 2e-08
UniRef50_UPI00004994C0 Cluster: DEAD/DEAH box helicase; n=2; Ent... 61 2e-08
UniRef50_UPI00004987FF Cluster: DEAD/DEAH box helicase; n=5; Ent... 61 2e-08
UniRef50_UPI00003C8469 Cluster: hypothetical protein Faci_030017... 61 2e-08
UniRef50_Q8F0Q7 Cluster: ATP-dependent RNA helicase; n=4; Leptos... 61 2e-08
UniRef50_Q2LY23 Cluster: Superfamily II DNA and RNA helicases; n... 61 2e-08
UniRef50_Q1GJ43 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 2e-08
UniRef50_A6TUK6 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A6NSW7 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_A4C0F9 Cluster: ATP-dependent RNA helicase; n=6; Bacter... 61 2e-08
UniRef50_A3PFY9 Cluster: DEAD/DEAH box helicase domain protein; ... 61 2e-08
UniRef50_A3JG19 Cluster: ATP-dependent RNA helicase; n=1; Marino... 61 2e-08
UniRef50_Q015I7 Cluster: ATP-dependent RNA helicase; n=2; Ostreo... 61 2e-08
UniRef50_Q012T2 Cluster: DEAD-box protein abstrakt; n=3; Ostreoc... 61 2e-08
UniRef50_Q012E3 Cluster: DEAD-box protein abstrakt; n=1; Ostreoc... 61 2e-08
UniRef50_Q54DV7 Cluster: Putative uncharacterized protein; n=1; ... 61 2e-08
UniRef50_Q3ZDP1 Cluster: Vasa-like protein; n=7; Neoptera|Rep: V... 61 2e-08
UniRef50_A2E9Y0 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A2DSJ0 Cluster: DEAD/DEAH box helicase family protein; ... 61 2e-08
UniRef50_A4RBW7 Cluster: Putative uncharacterized protein; n=4; ... 61 2e-08
UniRef50_Q0D622 Cluster: DEAD-box ATP-dependent RNA helicase 32;... 61 2e-08
UniRef50_Q56XG6 Cluster: DEAD-box ATP-dependent RNA helicase 15;... 61 2e-08
UniRef50_Q4P3W3 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 61 2e-08
UniRef50_Q0UMB6 Cluster: ATP-dependent RNA helicase DBP10; n=1; ... 61 2e-08
UniRef50_UPI0000DAE40A Cluster: hypothetical protein Rgryl_01000... 61 3e-08
UniRef50_UPI00004988F8 Cluster: DEAD/DEAH box helicase; n=1; Ent... 61 3e-08
UniRef50_UPI000065E01D Cluster: Homolog of Brachydanio rerio "Eu... 61 3e-08
UniRef50_O83749 Cluster: ATP-dependent RNA helicase; n=2; Trepon... 61 3e-08
UniRef50_Q2YZZ9 Cluster: Putative uncharacterized protein; n=1; ... 61 3e-08
UniRef50_Q0M1B5 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 61 3e-08
UniRef50_A6VX62 Cluster: DEAD/DEAH box helicase domain protein; ... 61 3e-08
UniRef50_A6G2A2 Cluster: DEAD/DEAH box helicase-like protein; n=... 61 3e-08
UniRef50_A4RW46 Cluster: Predicted protein; n=2; Ostreococcus|Re... 61 3e-08
UniRef50_Q9GNP1 Cluster: Vasa homolog; n=18; Eumetazoa|Rep: Vasa... 61 3e-08
UniRef50_Q16T16 Cluster: DEAD box ATP-dependent RNA helicase; n=... 61 3e-08
UniRef50_O00148 Cluster: ATP-dependent RNA helicase DDX39; n=27;... 61 3e-08
UniRef50_A4R5B8 Cluster: ATP-dependent RNA helicase DBP10; n=2; ... 61 3e-08
UniRef50_Q92AT6 Cluster: Lin1833 protein; n=13; Listeria|Rep: Li... 60 4e-08
UniRef50_Q6MBR0 Cluster: Putative ATP-dependent RNA helicase; n=... 60 4e-08
UniRef50_Q1U8H0 Cluster: Helicase-like:DEAD/DEAH box helicase-li... 60 4e-08
UniRef50_A4B5L7 Cluster: ATP-dependent RNA helicase DbpA; n=3; P... 60 4e-08
UniRef50_A1UCR5 Cluster: DEAD/DEAH box helicase domain protein; ... 60 4e-08
UniRef50_A4S107 Cluster: Predicted protein; n=1; Ostreococcus lu... 60 4e-08
UniRef50_Q8I416 Cluster: ATP-dependent RNA helicase, putative; n... 60 4e-08
UniRef50_Q54TF8 Cluster: DEAD-box RNA helicase; n=2; Dictyosteli... 60 4e-08
UniRef50_A5KDY2 Cluster: RNA helicase, putative; n=1; Plasmodium... 60 4e-08
UniRef50_A6RW79 Cluster: Putative uncharacterized protein; n=1; ... 60 4e-08
UniRef50_Q9P9G7 Cluster: DEAD-box RNA helicase; n=3; Methanosarc... 60 4e-08
UniRef50_A5E6W6 Cluster: ATP-dependent rRNA helicase RRP3; n=4; ... 60 4e-08
UniRef50_Q9C8S9 Cluster: Probable DEAD-box ATP-dependent RNA hel... 60 4e-08
UniRef50_P93008 Cluster: DEAD-box ATP-dependent RNA helicase 21;... 60 4e-08
UniRef50_Q5KME7 Cluster: Pre-mRNA-processing ATP-dependent RNA h... 60 4e-08
UniRef50_Q5KNF8 Cluster: Pre-mRNA-splicing ATP-dependent RNA hel... 60 4e-08
UniRef50_P0A9P8 Cluster: Cold-shock DEAD box protein A; n=54; Ga... 60 4e-08
UniRef50_Q12389 Cluster: ATP-dependent RNA helicase DBP10; n=10;... 60 4e-08
UniRef50_Q6C7X8 Cluster: ATP-dependent RNA helicase DBP10; n=3; ... 60 4e-08
UniRef50_UPI00015B617E Cluster: PREDICTED: hypothetical protein;... 60 6e-08
UniRef50_UPI00015B6038 Cluster: PREDICTED: similar to DEAD box A... 60 6e-08
UniRef50_UPI0000E87E35 Cluster: putative ATP-dependent RNA helic... 60 6e-08
UniRef50_Q81QF0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 6e-08
UniRef50_Q6MN50 Cluster: ATP-dependent RNA helicase; n=1; Bdello... 60 6e-08
UniRef50_Q18W60 Cluster: DEAD/DEAH box helicase-like; n=2; Desul... 60 6e-08
UniRef50_A6VWX2 Cluster: DEAD/DEAH box helicase domain protein; ... 60 6e-08
UniRef50_A1FEC3 Cluster: DEAD/DEAH box helicase-like; n=21; Gamm... 60 6e-08
UniRef50_Q9AW05 Cluster: DEAD box protein; n=1; Guillardia theta... 60 6e-08
UniRef50_Q016I5 Cluster: Predicted ATP-dependent RNA helicase FA... 60 6e-08
UniRef50_A4IBK1 Cluster: ATP-dependent RNA helicase, putative; n... 60 6e-08
UniRef50_A6PWH4 Cluster: HLA-B associated transcript 1; n=6; Hom... 60 6e-08
UniRef50_A7TJK8 Cluster: Putative uncharacterized protein; n=1; ... 60 6e-08
UniRef50_Q13838 Cluster: Spliceosome RNA helicase BAT1; n=55; Eu... 60 6e-08
UniRef50_Q9NXZ2 Cluster: Probable ATP-dependent RNA helicase DDX... 60 6e-08
UniRef50_Q8SR01 Cluster: ATP-dependent RNA helicase DBP4; n=1; E... 60 6e-08
UniRef50_Q4S6B9 Cluster: Chromosome 9 SCAF14729, whole genome sh... 60 8e-08
UniRef50_Q5FUQ9 Cluster: ATP-dependent RNA helicase; n=11; cellu... 60 8e-08
UniRef50_Q31EF0 Cluster: ATP-dependent RNA helicase; n=1; Thiomi... 60 8e-08
UniRef50_Q0AR94 Cluster: DEAD/DEAH box helicase domain protein; ... 60 8e-08
UniRef50_A4C6L9 Cluster: ATP-dependent RNA helicase, DEAD box fa... 60 8e-08
UniRef50_A3EUK2 Cluster: Superfamily II DNA and RNA helicase; n=... 60 8e-08
UniRef50_A2U1Q9 Cluster: ATP-dependent RNA helicase, DEAD/DEAH b... 60 8e-08
UniRef50_Q7QA96 Cluster: ENSANGP00000013118; n=5; Eumetazoa|Rep:... 60 8e-08
UniRef50_Q66WQ1 Cluster: DEAD box DNA helicase; n=2; Plasmodium ... 60 8e-08
UniRef50_Q1JSZ1 Cluster: ATP-dependent RNA helicase, putative; n... 60 8e-08
UniRef50_A7U5W7 Cluster: DEAD-box helicase 2; n=6; Plasmodium|Re... 60 8e-08
UniRef50_A7RY08 Cluster: Predicted protein; n=2; Eukaryota|Rep: ... 60 8e-08
UniRef50_Q9FZ92 Cluster: Putative DEAD-box ATP-dependent RNA hel... 60 8e-08
UniRef50_O49289 Cluster: Putative DEAD-box ATP-dependent RNA hel... 60 8e-08
UniRef50_Q5BFU7 Cluster: ATP-dependent RNA helicase dbp10; n=14;... 60 8e-08
UniRef50_UPI0000E488C7 Cluster: PREDICTED: hypothetical protein;... 59 1e-07
UniRef50_Q30YG9 Cluster: DEAD/DEAH box helicase-like; n=3; Delta... 59 1e-07
UniRef50_Q41F45 Cluster: Helicase, C-terminal:DEAD/DEAH box heli... 59 1e-07
UniRef50_Q0BUS0 Cluster: ATP-dependent RNA helicase; n=3; Rhodos... 59 1e-07
UniRef50_Q9XVZ6 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q7JQN4 Cluster: LD15481p; n=7; Endopterygota|Rep: LD154... 59 1e-07
UniRef50_Q61AN8 Cluster: Putative uncharacterized protein CBG136... 59 1e-07
UniRef50_Q54CD6 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_A7RMK9 Cluster: Predicted protein; n=1; Nematostella ve... 59 1e-07
UniRef50_A2EAD4 Cluster: DEAD/DEAH box helicase family protein; ... 59 1e-07
UniRef50_A4RHM4 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q4P9E5 Cluster: ATP-dependent rRNA helicase SPB4; n=2; ... 59 1e-07
UniRef50_Q9FVV4 Cluster: Putative DEAD-box ATP-dependent RNA hel... 59 1e-07
UniRef50_A3BT52 Cluster: DEAD-box ATP-dependent RNA helicase 29;... 59 1e-07
UniRef50_UPI0000498886 Cluster: DEAD/DEAH box helicase; n=1; Ent... 59 1e-07
UniRef50_Q8AYI1 Cluster: Vasa-like protein; n=1; Squalus acanthi... 59 1e-07
UniRef50_Q7VQL9 Cluster: Cold-shock DEAD-box protein A, inducibl... 59 1e-07
UniRef50_Q30SZ2 Cluster: DEAD/DEAH box helicase-like; n=1; Thiom... 59 1e-07
UniRef50_O34750 Cluster: YfmL protein; n=5; Bacillus|Rep: YfmL p... 59 1e-07
UniRef50_Q1WSN6 Cluster: ATP-dependent RNA helicase; n=1; Lactob... 59 1e-07
UniRef50_A7CSF3 Cluster: DEAD/DEAH box helicase domain protein; ... 59 1e-07
UniRef50_A2U4F0 Cluster: Putative ATP-dependent RNA helicase; n=... 59 1e-07
UniRef50_Q3LWF0 Cluster: ATP-dependent RNA helicase; n=1; Bigelo... 59 1e-07
UniRef50_A4RYJ1 Cluster: Predicted protein; n=3; Ostreococcus|Re... 59 1e-07
UniRef50_Q95QN2 Cluster: Putative uncharacterized protein; n=2; ... 59 1e-07
UniRef50_Q2LZJ8 Cluster: GA19670-PA; n=1; Drosophila pseudoobscu... 59 1e-07
UniRef50_Q238V7 Cluster: Type III restriction enzyme, res subuni... 59 1e-07
UniRef50_Q1JSQ3 Cluster: Dead-box helicase, putative; n=1; Toxop... 59 1e-07
UniRef50_A5K2E0 Cluster: DEAD/DEAH box ATP-dependent RNA helicas... 59 1e-07
UniRef50_A6R918 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_P38712 Cluster: ATP-dependent rRNA helicase RRP3; n=6; ... 59 1e-07
UniRef50_Q4P3U9 Cluster: ATP-dependent rRNA helicase RRP3; n=20;... 59 1e-07
UniRef50_Q5KIK3 Cluster: ATP-dependent RNA helicase DRS1; n=1; F... 59 1e-07
>UniRef50_Q4T821 Cluster: Chromosome undetermined SCAF7914, whole
genome shotgun sequence; n=3; Tetraodontidae|Rep:
Chromosome undetermined SCAF7914, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 502
Score = 124 bits (299), Expect = 2e-27
Identities = 54/66 (81%), Positives = 63/66 (95%)
Frame = +3
Query: 15 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 194
T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY I
Sbjct: 86 TKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLI 145
Query: 195 PVLEQV 212
P+LE++
Sbjct: 146 PMLERI 151
Score = 80.2 bits (189), Expect = 5e-14
Identities = 52/107 (48%), Positives = 65/107 (60%), Gaps = 27/107 (25%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAK--------MDQ-------------- 622
GTNLRDDIMR+ + V V+IATPGR++DLM K VAK MD+
Sbjct: 195 GTNLRDDIMRLDETVHVVIATPGRILDLMKKGVAKVDKVQIMVMDEVGKRTPKAALCGGV 254
Query: 623 -----CRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
C +V +ADKLLSQDF +++ +IS L K RQILL+SATFP
Sbjct: 255 GAAGPCVWVVSPQADKLLSQDFVALVEDIISFLAKNRQILLYSATFP 301
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/44 (65%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTG 509
+D KKD IQAL++VPTRELALQ SQI I++AKH ++VM TTG
Sbjct: 151 IDLKKDHIQALVLVPTRELALQVSQISIQIAKHLGGVKVMATTG 194
>UniRef50_Q8IV96 Cluster: DDX6 protein; n=8; Eukaryota|Rep: DDX6
protein - Homo sapiens (Human)
Length = 187
Score = 123 bits (297), Expect = 4e-27
Identities = 54/66 (81%), Positives = 63/66 (95%)
Frame = +3
Query: 15 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 194
T+GNEFE++CLKRELLMGIFE GWEKPSPIQE SIPIALSG+D+LARAKNGTGK+GAY I
Sbjct: 93 TKGNEFEDYCLKRELLMGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLI 152
Query: 195 PVLEQV 212
P+LE++
Sbjct: 153 PLLERL 158
Score = 46.8 bits (106), Expect = 6e-04
Identities = 20/27 (74%), Positives = 24/27 (88%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQIC 461
+D KKD IQA+++VPTRELALQ SQIC
Sbjct: 158 LDLKKDNIQAMVIVPTRELALQVSQIC 184
>UniRef50_UPI0000566899 Cluster: UPI0000566899 related cluster; n=1;
Mus musculus|Rep: UPI0000566899 UniRef100 entry - Mus
musculus
Length = 449
Score = 112 bits (269), Expect = 1e-23
Identities = 51/66 (77%), Positives = 61/66 (92%)
Frame = +3
Query: 15 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 194
T+GNEFE++CLKRELL+GIFE GWE PS IQE SIPIALSG+D+LARAKNGTGK+GAY I
Sbjct: 79 TKGNEFEDYCLKRELLIGIFEMGWE-PSSIQEESIPIALSGRDILARAKNGTGKSGAYLI 137
Query: 195 PVLEQV 212
P+LE++
Sbjct: 138 PLLERL 143
Score = 103 bits (248), Expect = 4e-21
Identities = 49/80 (61%), Positives = 63/80 (78%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GTNLRDD+MR+ V+IATPGR++DL+ K + K+D +M+VLDEADKLLSQDF +++
Sbjct: 187 GTNLRDDVMRLDDTGHVVIATPGRILDLIKKCLEKVDHVQMVVLDEADKLLSQDFVQIME 246
Query: 689 MVISRLPKERQILLFSATFP 748
I LPK RQILL+SATFP
Sbjct: 247 AFILTLPKNRQILLYSATFP 266
Score = 60.5 bits (140), Expect = 4e-08
Identities = 28/44 (63%), Positives = 36/44 (81%), Gaps = 1/44 (2%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT-DIRVMVTTG 509
+D KKD IQA+++VPTRELALQ SQICI+++KH +VM TTG
Sbjct: 143 LDLKKDNIQAMVIVPTRELALQVSQICIQVSKHMGGAKVMATTG 186
>UniRef50_P39517 Cluster: ATP-dependent RNA helicase DHH1; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DHH1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 506
Score = 109 bits (261), Expect = 9e-23
Identities = 48/67 (71%), Positives = 60/67 (89%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
+T+GN FE+F LKRELLMGIFE G+EKPSPIQE +IP+A++G+D+LARAKNGTGKT A+
Sbjct: 42 NTKGNTFEDFYLKRELLMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFV 101
Query: 192 IPVLEQV 212
IP LE+V
Sbjct: 102 IPTLEKV 108
Score = 101 bits (243), Expect = 1e-20
Identities = 45/93 (48%), Positives = 66/93 (70%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK SC GTNLRDDI+R+ + V +++ TPGR++DL ++VA + C + ++DEA
Sbjct: 138 GKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEA 197
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
DK+LS+DFK +++ ++S LP Q LLFSATFP
Sbjct: 198 DKMLSRDFKTIIEQILSFLPPTHQSLLFSATFP 230
Score = 57.2 bits (132), Expect = 4e-07
Identities = 29/43 (67%), Positives = 32/43 (74%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
V PK + IQALI+VPTRELALQTSQ+ L KH I MVTTG
Sbjct: 108 VKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTG 150
>UniRef50_Q5KJI2 Cluster: ATP-dependent RNA helicase DHH1; n=4;
Dikarya|Rep: ATP-dependent RNA helicase DHH1 -
Cryptococcus neoformans (Filobasidiella neoformans)
Length = 625
Score = 99 bits (238), Expect = 6e-20
Identities = 41/80 (51%), Positives = 63/80 (78%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT LRDDI+R+ Q V +++ TPGR++DL K +A +++C + V+DEADKLLS+DF +++
Sbjct: 142 GTTLRDDILRLQQPVHILVGTPGRILDLGSKGIASLNKCGVFVMDEADKLLSEDFMPVIE 201
Query: 689 MVISRLPKERQILLFSATFP 748
++ P+ERQ++LFSATFP
Sbjct: 202 QTLALCPQERQVMLFSATFP 221
Score = 96.7 bits (230), Expect = 5e-19
Identities = 41/66 (62%), Positives = 57/66 (86%)
Frame = +3
Query: 15 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 194
T+G+ FE+F L+RELLMGI+ G+E+PSPIQE +IP+AL+G+D+LARAKNGTGKT ++ I
Sbjct: 33 TQGSRFEDFGLRRELLMGIYTAGFERPSPIQEQAIPMALTGRDILARAKNGTGKTASFII 92
Query: 195 PVLEQV 212
P L ++
Sbjct: 93 PTLNRI 98
Score = 53.2 bits (122), Expect = 7e-06
Identities = 26/40 (65%), Positives = 32/40 (80%), Gaps = 1/40 (2%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGAQT 518
IQALI+VPTRELALQTSQ+C L H +++VM+TTG T
Sbjct: 105 IQALILVPTRELALQTSQVCKTLGAHIPNLQVMITTGGTT 144
>UniRef50_Q8SQK9 Cluster: ATP-dependent RNA helicase DHH1; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent RNA helicase
DHH1 - Encephalitozoon cuniculi
Length = 489
Score = 84.6 bits (200), Expect = 2e-15
Identities = 37/80 (46%), Positives = 59/80 (73%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT+++DDI+R+ V V++ TPGR++DL++K+V + + +LV DEADKLL F +
Sbjct: 213 GTSMQDDIIRVSNGVHVMVGTPGRIVDLVEKRVGTLSKRVILVFDEADKLLDVTFGETVT 272
Query: 689 MVISRLPKERQILLFSATFP 748
++ LP+E+Q+LL+SATFP
Sbjct: 273 KLLDLLPREKQMLLYSATFP 292
Score = 64.9 bits (151), Expect = 2e-09
Identities = 31/67 (46%), Positives = 44/67 (65%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
+T G +E L LL I + G++ PSP+Q ASIP L GK++L R+KNGTGKT +Y
Sbjct: 104 ETEGIGWESLGLGPVLLKRIRDIGYDFPSPVQVASIPHVLGGKNLLVRSKNGTGKTASYI 163
Query: 192 IPVLEQV 212
+P+L +
Sbjct: 164 VPMLNMI 170
>UniRef50_Q39MK8 Cluster: DEAD/DEAH box helicase; n=10;
Proteobacteria|Rep: DEAD/DEAH box helicase -
Burkholderia sp. (strain 383) (Burkholderia cepacia
(strain ATCC 17760/ NCIB 9086 / R18194))
Length = 481
Score = 78.6 bits (185), Expect = 2e-13
Identities = 36/81 (44%), Positives = 54/81 (66%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ +M++ + V V++ATPGR++DL + + DQ + LVLDEAD++L F
Sbjct: 109 YGGVSINPQMMKLRKGVDVLVATPGRLLDLNRQNAVQFDQVQTLVLDEADRMLDLGFARE 168
Query: 683 LDMVISRLPKERQILLFSATF 745
L+ V + LP +RQ LLFSATF
Sbjct: 169 LNAVFAALPAQRQTLLFSATF 189
Score = 54.8 bits (126), Expect = 2e-06
Identities = 21/53 (39%), Positives = 37/53 (69%)
Frame = +3
Query: 57 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
LL + + ++ P+P+Q +IP L GKDV+A A+ GTGKT + +P+L++++
Sbjct: 12 LLRNLQDLNYQAPTPVQAKAIPAVLGGKDVMAGAQTGTGKTAGFALPLLQRLV 64
>UniRef50_Q23U16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Tetrahymena thermophila SB210|Rep: DEAD/DEAH box
helicase family protein - Tetrahymena thermophila SB210
Length = 475
Score = 78.2 bits (184), Expect = 2e-13
Identities = 34/90 (37%), Positives = 58/90 (64%)
Frame = +2
Query: 473 KTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEAD 652
K ++C G GT+ ++D R+ + VQV++ TPGR++DL+ K+ D ++ +LDEAD
Sbjct: 197 KVSAYACTG---GTDPKEDRKRLREGVQVVVGTPGRVLDLIQKKTLVTDHLKLFILDEAD 253
Query: 653 KLLSQDFKGMLDMVISRLPKERQILLFSAT 742
++L + FK ++ + LP + Q+ LFSAT
Sbjct: 254 EMLGRGFKDQINKIFQNLPHDIQVALFSAT 283
Score = 50.4 bits (115), Expect = 5e-05
Identities = 21/48 (43%), Positives = 32/48 (66%)
Frame = +3
Query: 69 IFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+ G+EKPSPIQ+ I + GKD +A+A++GTGKT + I L+ +
Sbjct: 49 VLSYGFEKPSPIQQCGIIPIIKGKDTIAQAQSGTGKTATFSIATLQVI 96
>UniRef50_Q3AZR1 Cluster: DEAD/DEAH box helicase-like; n=2;
Synechococcus|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 458
Score = 77.8 bits (183), Expect = 3e-13
Identities = 33/81 (40%), Positives = 56/81 (69%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++R + R+ V +++ATPGR++DL+++++ + D ++LVLDEAD++L F
Sbjct: 131 FGGVSIRPQVKRLQGGVDILVATPGRLLDLINQKMIRFDNLKVLVLDEADRMLDMGFIRD 190
Query: 683 LDMVISRLPKERQILLFSATF 745
+ VI LPK RQ ++FSATF
Sbjct: 191 IKKVIEYLPKNRQNMMFSATF 211
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
FE+ L E + I E G+ P+PIQ +IP L GKD++A A+ GTGKT A+ +P++E
Sbjct: 26 FEQLELCAETVRSIKESGYLSPTPIQALTIPEVLQGKDIMASAQTGTGKTAAFILPIIE 84
>UniRef50_A7HG33 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Cystobacterineae|Rep: DEAD/DEAH box helicase domain
protein - Anaeromyxobacter sp. Fw109-5
Length = 455
Score = 77.8 bits (183), Expect = 3e-13
Identities = 35/78 (44%), Positives = 52/78 (66%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + Q +++IATPGR++D +++ A++D LVLDEAD++L FK LD
Sbjct: 108 GVGMAQQAEALRQKREIVIATPGRLVDHLEQGNARLDGIEALVLDEADRMLDMGFKPQLD 167
Query: 689 MVISRLPKERQILLFSAT 742
++ RLPK+RQ LLFSAT
Sbjct: 168 RILRRLPKQRQTLLFSAT 185
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/61 (44%), Positives = 40/61 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L E L + G+E P+PIQ +IP AL+GKDV+ A GTGKT A+ +P++++
Sbjct: 6 FAELHLSPEALAALRRAGFEHPTPIQAQAIPPALAGKDVIGTAATGTGKTAAFLLPLIDR 65
Query: 210 V 212
+
Sbjct: 66 L 66
>UniRef50_Q62IF8 Cluster: ATP-dependent RNA helicase RhlE; n=59;
Betaproteobacteria|Rep: ATP-dependent RNA helicase RhlE
- Burkholderia mallei (Pseudomonas mallei)
Length = 482
Score = 77.4 bits (182), Expect = 4e-13
Identities = 34/81 (41%), Positives = 56/81 (69%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++ + + + V+++IATPGR++D + ++ A + Q ++LVLDEAD++L F
Sbjct: 122 FGGVDMNPQMAELRRGVEILIATPGRLLDHVQQKTANLGQVQILVLDEADRMLDMGFLPD 181
Query: 683 LDMVISRLPKERQILLFSATF 745
L +++ LPKERQ LLFSATF
Sbjct: 182 LQRILNLLPKERQTLLFSATF 202
Score = 67.7 bits (158), Expect = 3e-10
Identities = 26/62 (41%), Positives = 46/62 (74%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F L E+L I E+G+ P+PIQ +IP+ LSG+DV+ A+ GTGKT ++ +P++++
Sbjct: 13 FDQFGLAAEILKAIAEQGYTTPTPIQAKAIPVVLSGRDVMGAAQTGTGKTASFSLPIIQR 72
Query: 210 VI 215
++
Sbjct: 73 LL 74
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/41 (43%), Positives = 24/41 (58%)
Frame = +3
Query: 387 PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
P + ++ALI+ PTRELA Q + AKHT +R V G
Sbjct: 83 PARHPVRALILTPTRELADQVAANVHAYAKHTPLRSAVVFG 123
>UniRef50_P25888 Cluster: Putative ATP-dependent RNA helicase rhlE;
n=122; cellular organisms|Rep: Putative ATP-dependent
RNA helicase rhlE - Escherichia coli (strain K12)
Length = 454
Score = 77.4 bits (182), Expect = 4e-13
Identities = 35/81 (43%), Positives = 55/81 (67%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++ +M++ V V++ATPGR++DL + K+DQ +LVLDEAD++L F
Sbjct: 110 FGGVSINPQMMKLRGGVDVLVATPGRLLDLEHQNAVKLDQVEILVLDEADRMLDMGFIHD 169
Query: 683 LDMVISRLPKERQILLFSATF 745
+ V+++LP +RQ LLFSATF
Sbjct: 170 IRRVLTKLPAKRQNLLFSATF 190
Score = 62.5 bits (145), Expect = 1e-08
Identities = 24/62 (38%), Positives = 43/62 (69%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ L ++L + E+G+ +P+PIQ+ +IP L G+D++A A+ GTGKT + +P+L+
Sbjct: 3 FDSLGLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQH 62
Query: 210 VI 215
+I
Sbjct: 63 LI 64
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/36 (41%), Positives = 24/36 (66%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
++ALI+ PTRELA Q + + +K+ +IR +V G
Sbjct: 76 VRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFG 111
>UniRef50_Q8D7D0 Cluster: Superfamily II DNA and RNA helicase; n=20;
Gammaproteobacteria|Rep: Superfamily II DNA and RNA
helicase - Vibrio vulnificus
Length = 418
Score = 77.0 bits (181), Expect = 5e-13
Identities = 35/81 (43%), Positives = 56/81 (69%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT++R ++ + V ++IATPGR++D + + ++Q +MLVLDEAD++L F
Sbjct: 112 YGGTSIRVQQEQLAKGVDILIATPGRLLDHLFTKKTSLNQLQMLVLDEADRMLDMGFLPD 171
Query: 683 LDMVISRLPKERQILLFSATF 745
+ ++ R+P+ERQ LLFSATF
Sbjct: 172 IQRIMKRMPEERQTLLFSATF 192
Score = 57.2 bits (132), Expect = 4e-07
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N F E L L + + G+ P+PIQ+ +IP L G+DVLA A+ GTGKT AY +P++
Sbjct: 3 NTFIELGLDSSLSDHLSQLGFNTPTPIQQQAIPHLLQGRDVLAAAQTGTGKTAAYGLPLI 62
Query: 204 EQV 212
+ +
Sbjct: 63 QML 65
>UniRef50_Q8YXJ0 Cluster: ATP-dependent RNA helicase; n=11;
Cyanobacteria|Rep: ATP-dependent RNA helicase - Anabaena
sp. (strain PCC 7120)
Length = 513
Score = 76.6 bits (180), Expect = 6e-13
Identities = 32/82 (39%), Positives = 57/82 (69%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ ++++ + V +++ TPGR+IDL+++ K+DQ + VLDEAD++LS F
Sbjct: 106 YGGQSIDRQMLQLKRGVHIVVGTPGRVIDLLERGNLKLDQVKWFVLDEADEMLSMGFIDD 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S+ P++RQ LFSAT P
Sbjct: 166 VEKILSQAPQDRQTALFSATMP 187
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E + +E + + + G+ P+ IQ +IP LSG+DV+ +++ GTGKT A+ +P+LE+
Sbjct: 5 FPELGISQERVEHLEKLGFTAPTNIQAQAIPQLLSGRDVVGQSQTGTGKTAAFSLPILER 64
Query: 210 V 212
+
Sbjct: 65 L 65
Score = 39.1 bits (87), Expect = 0.11
Identities = 14/48 (29%), Positives = 29/48 (60%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+DP++ +QA+++ PTRELA+Q + ++ +R + G Q+ +
Sbjct: 65 LDPQQKAVQAIVLTPTRELAIQVHDAMAQFVGNSGLRTLAIYGGQSID 112
>UniRef50_Q5NN72 Cluster: DNA and RNA helicase; n=3;
Sphingomonadales|Rep: DNA and RNA helicase - Zymomonas
mobilis
Length = 492
Score = 76.6 bits (180), Expect = 6e-13
Identities = 36/93 (38%), Positives = 56/93 (60%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK H+ S + G + + + + V V+IATPGR++DL ++ + C MLV+DEA
Sbjct: 96 GKYHKLSMSLLIGGVPMAEQQAALEKGVDVLIATPGRLLDLFERGKILLSSCEMLVIDEA 155
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F ++ + ++LP RQ LLFSAT P
Sbjct: 156 DRMLDMGFIPDIETICTKLPTSRQTLLFSATMP 188
Score = 59.7 bits (138), Expect = 8e-08
Identities = 24/59 (40%), Positives = 42/59 (71%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F + L +ELL + E G+E+P+P+Q A+IP L +D++A A+ GTGKT ++ +P+++
Sbjct: 3 FADLGLSKELLQAVAELGYEEPTPVQAAAIPSVLMMRDLIAVAQTGTGKTASFVLPMID 61
>UniRef50_A5B2H1 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 377
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/67 (50%), Positives = 48/67 (71%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
D FEE L+ L+ + +KG EKP+PIQE +IP+ L GKDV+ARAK G+GKT AY
Sbjct: 20 DEESKTFEELGLEPSLIRALIKKGIEKPTPIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 192 IPVLEQV 212
+P+L+++
Sbjct: 80 LPLLQKL 86
Score = 35.5 bits (78), Expect = 1.4
Identities = 18/42 (42%), Positives = 26/42 (61%)
Frame = +2
Query: 617 DQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
+ +LVLDEAD LLS ++ L + + +P+ Q LL SAT
Sbjct: 122 ESLEILVLDEADLLLSYGYEDDLKALTAHVPRRCQCLLMSAT 163
>UniRef50_Q6BFH3 Cluster: Nucleolar RNA helicase II, putative; n=3;
Paramecium tetraurelia|Rep: Nucleolar RNA helicase II,
putative - Paramecium tetraurelia
Length = 664
Score = 76.6 bits (180), Expect = 6e-13
Identities = 34/93 (36%), Positives = 65/93 (69%), Gaps = 1/93 (1%)
Frame = +2
Query: 473 KTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEAD 652
K + + Y GT+LR+ I ++ Q ++++ TPGR+ DL++++V K+D+ +++VLDEAD
Sbjct: 123 KENEYRIYSIYGGTDLRNQIDQVRQGCEIVVGTPGRIQDLLERKVLKLDEIQVVVLDEAD 182
Query: 653 KLLSQDFKGMLDMVISRLPKER-QILLFSATFP 748
++L+ F+ ++ ++S + + Q+LLFSAT P
Sbjct: 183 QMLNFGFQENIEKIMSYFNERKIQMLLFSATIP 215
Score = 41.9 bits (94), Expect = 0.016
Identities = 15/38 (39%), Positives = 26/38 (68%)
Frame = +3
Query: 99 PIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
PIQ+ +G D++ + + G+GKT AYC+P+LE++
Sbjct: 50 PIQQQCFETIYNGDDIIGQDRTGSGKTLAYCLPILERI 87
>UniRef50_Q675R0 Cluster: ATP-dependent 61 kDa nucleolar RNA
helicase-like protein; n=1; Oikopleura dioica|Rep:
ATP-dependent 61 kDa nucleolar RNA helicase-like protein
- Oikopleura dioica (Tunicate)
Length = 548
Score = 76.6 bits (180), Expect = 6e-13
Identities = 31/63 (49%), Positives = 48/63 (76%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
++ F L +L GI GW++P+ IQEA +PIAL GKD+LA+A+ G+GKTGAY IP+++
Sbjct: 12 QWNSFGLDPRILSGIAALGWKEPTEIQEAGLPIALKGKDILAKARTGSGKTGAYLIPIVQ 71
Query: 207 QVI 215
+++
Sbjct: 72 RIL 74
Score = 45.6 bits (103), Expect = 0.001
Identities = 21/65 (32%), Positives = 37/65 (56%)
Frame = +2
Query: 548 NVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQIL 727
+ ++I TPGR+++ + + + + ++VLDEAD L M+ ++S LP +Q
Sbjct: 125 SASIVIGTPGRILNALKSERLSLTELSVMVLDEADLLFGFGNDKMVTEIVSHLPGTQQSF 184
Query: 728 LFSAT 742
L SAT
Sbjct: 185 LMSAT 189
>UniRef50_A7RGX3 Cluster: Predicted protein; n=3; Eukaryota|Rep:
Predicted protein - Nematostella vectensis
Length = 487
Score = 76.6 bits (180), Expect = 6e-13
Identities = 32/80 (40%), Positives = 55/80 (68%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G+++++ + + V +++ATPGR++DL+DK++ +D CR LVLDEAD+++ F+ +
Sbjct: 166 GSSIKEQSDAMKRGVHMVVATPGRLMDLLDKRIITLDVCRYLVLDEADRMIDMGFEEDVR 225
Query: 689 MVISRLPKERQILLFSATFP 748
+ S +RQ LLFSAT P
Sbjct: 226 TIFSYFKSQRQTLLFSATMP 245
Score = 47.2 bits (107), Expect = 4e-04
Identities = 20/58 (34%), Positives = 35/58 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
F+E R +L + +KG P+PIQ +P L+G+D++ A G+GKT + +P++
Sbjct: 49 FKEMKFPRPILAALKKKGITHPTPIQVQGLPAVLTGRDMIGIAFTGSGKTLVFTLPII 106
>UniRef50_A3ZXX1 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Blastopirellula marina DSM 3645
Length = 447
Score = 76.2 bits (179), Expect = 8e-13
Identities = 34/93 (36%), Positives = 53/93 (56%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G+ + + G + + + V V IATPGR++DLMD+ + Q + VLDEA
Sbjct: 93 GRNVKFRLTTIFGGVGQNPQVRALKRGVHVAIATPGRLLDLMDQGYVDLSQAKTFVLDEA 152
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F L ++S+LPK+RQ + F+AT P
Sbjct: 153 DRMLDMGFMPALKTIVSKLPKQRQTIFFTATMP 185
Score = 47.2 bits (107), Expect = 4e-04
Identities = 19/43 (44%), Positives = 29/43 (67%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+ P+PIQ +IP L G D++ A+ GTGKT A+ +P+L Q+
Sbjct: 16 YHTPTPIQGQAIPHLLEGSDLIGCAQTGTGKTAAFALPILNQL 58
>UniRef50_Q26CN9 Cluster: ATP-dependent RNA helicase; n=1;
Flavobacteria bacterium BBFL7|Rep: ATP-dependent RNA
helicase - Flavobacteria bacterium BBFL7
Length = 644
Score = 75.8 bits (178), Expect = 1e-12
Identities = 34/80 (42%), Positives = 54/80 (67%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G N+ + I I + Q+I+ATPGR++DLM ++ K+D + +VLDEAD++L+ FK
Sbjct: 118 FGGANIMNQIRDIRRGAQIIVATPGRLMDLMKRREVKLDALKYMVLDEADEMLNMGFKED 177
Query: 683 LDMVISRLPKERQILLFSAT 742
+D ++S+ R I LFSAT
Sbjct: 178 IDFILSKSDTGRNIWLFSAT 197
Score = 51.6 bits (118), Expect = 2e-05
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 206
FE L + LL G+ + G+E P+ IQ+ SIPI L D + A+ GTGKT A+ +P+L+
Sbjct: 15 FEVLGLSQPLLNGLADMGFENPTEIQQQSIPILLKHDGDFIGLAQTGTGKTAAFGLPLLD 74
Query: 207 QV 212
+
Sbjct: 75 LI 76
>UniRef50_Q2FKY7 Cluster: DEAD/DEAH box helicase-like; n=1;
Methanospirillum hungatei JF-1|Rep: DEAD/DEAH box
helicase-like - Methanospirillum hungatei (strain JF-1 /
DSM 864)
Length = 531
Score = 74.9 bits (176), Expect = 2e-12
Identities = 33/82 (40%), Positives = 54/82 (65%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I + + VQ+II TPGR+ID + ++ +D ++VLDEAD++L F+
Sbjct: 108 YGGQPIERQIKALSRGVQIIIGTPGRVIDHIKRKTLLLDAVSLVVLDEADQMLDMGFRED 167
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S +PKERQ ++ SATFP
Sbjct: 168 IEEILSHIPKERQTVILSATFP 189
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F + L ++ I + G+E+P+PIQ+ IP+ L+G DV +A GTGKT A+ IP +E
Sbjct: 6 FSDLQLSPGIIKAIRDIGYEEPTPIQQEVIPLILAGNDVAGQAYTGTGKTAAFGIPAIE 64
>UniRef50_Q185X0 Cluster: ATP-dependent RNA helicase; n=3;
Clostridium difficile|Rep: ATP-dependent RNA helicase -
Clostridium difficile (strain 630)
Length = 497
Score = 74.5 bits (175), Expect = 2e-12
Identities = 30/91 (32%), Positives = 59/91 (64%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G+ + C+ + +++D I + Q V +++ATPGR++D +++ K++ + LV+DEA
Sbjct: 95 GRLKKVRCSAIFGKQSIKDQIAELKQRVHIVVATPGRILDHINRGSIKLENVKYLVIDEA 154
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
DK+ ++ F ++ ++ LPKE+ + LFSAT
Sbjct: 155 DKMFNKGFVEQMEKILLNLPKEKIVSLFSAT 185
Score = 52.0 bits (119), Expect = 2e-05
Identities = 22/61 (36%), Positives = 38/61 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE+F L ++L + G+ PS +Q IP L G++++ R+K G+GKT ++ IP+ E
Sbjct: 5 FEKFKLNEKILKSLKSLGYNIPSRVQREVIPKLLKGQNLVVRSKTGSGKTASFAIPLCEN 64
Query: 210 V 212
+
Sbjct: 65 I 65
Score = 35.9 bits (79), Expect = 1.1
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +3
Query: 396 DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ IQALIVVPTRELALQ ++ + +R G Q+ +
Sbjct: 70 NNIQALIVVPTRELALQVKDEISDIGRLKKVRCSAIFGKQSIK 112
>UniRef50_A6VTY7 Cluster: DEAD/DEAH box helicase domain protein;
n=48; root|Rep: DEAD/DEAH box helicase domain protein -
Marinomonas sp. MWYL1
Length = 463
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/81 (40%), Positives = 54/81 (66%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + +M + + ++IATPGRM+DL +++ + D+ +LVLDEAD++L F
Sbjct: 112 FGGVKINPQMMALRRGADILIATPGRMMDLYNQKAVRFDKLEVLVLDEADRMLDMGFIHD 171
Query: 683 LDMVISRLPKERQILLFSATF 745
+ +++ LPK+RQ LLFSATF
Sbjct: 172 IKKILAILPKKRQNLLFSATF 192
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/59 (42%), Positives = 38/59 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F + L +L I ++G+ +PS IQ +IP L G+DV+A A+ GTGKT + +P+LE
Sbjct: 7 FNKLGLSAPILKAIEDQGYTEPSAIQAQAIPAILEGQDVMAAAQTGTGKTAGFTLPLLE 65
>UniRef50_A6GPV2 Cluster: Helicase; n=1; Limnobacter sp. MED105|Rep:
Helicase - Limnobacter sp. MED105
Length = 539
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/81 (43%), Positives = 54/81 (66%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I + + V+++IATPGR++D + ++ + Q ++LVLDEAD++L F
Sbjct: 131 YGGVDINPQIQTLRRGVELVIATPGRLLDHVQQKSINLGQVQVLVLDEADRMLDMGFLPD 190
Query: 683 LDMVISRLPKERQILLFSATF 745
L +I+ LPK RQ LLFSATF
Sbjct: 191 LQRIINLLPKTRQNLLFSATF 211
Score = 57.2 bits (132), Expect = 4e-07
Identities = 22/62 (35%), Positives = 41/62 (66%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F +F L ++ I +G+ +P+PIQ +IP+ ++G DV+ A+ GTGKT + +P+L +
Sbjct: 22 FADFALHPDIQKAIDAQGYTQPTPIQAKAIPVVMTGVDVMGAAQTGTGKTAGFSLPILNR 81
Query: 210 VI 215
++
Sbjct: 82 LM 83
>UniRef50_A7R616 Cluster: Chromosome undetermined scaffold_1128,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1128, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 372
Score = 74.5 bits (175), Expect = 2e-12
Identities = 33/69 (47%), Positives = 47/69 (68%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
D FEE L+ L+ + + G EKP+ IQE +IP+ L GKDV+ARAK G+GKT AY
Sbjct: 20 DEESKTFEELGLEPSLIRALIKMGIEKPTSIQEVAIPLILEGKDVVARAKTGSGKTFAYL 79
Query: 192 IPVLEQVIC 218
+P+L+++ C
Sbjct: 80 LPLLQKLFC 88
>UniRef50_Q7QQX6 Cluster: GLP_383_7421_6129; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_383_7421_6129 - Giardia lamblia ATCC
50803
Length = 430
Score = 74.5 bits (175), Expect = 2e-12
Identities = 32/61 (52%), Positives = 49/61 (80%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F LK+ELLMG+ ++G+++ +P+QE +IP L+ +DV+ARAKNGTGKTG++ IP+L+
Sbjct: 23 FSSLGLKQELLMGLTQEGFQQLTPVQELAIPHILARRDVVARAKNGTGKTGSFLIPILQM 82
Query: 210 V 212
V
Sbjct: 83 V 83
Score = 64.1 bits (149), Expect = 3e-09
Identities = 32/80 (40%), Positives = 50/80 (62%), Gaps = 1/80 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ +D R + V++ATPGR+ L+D+++ C ++VLDEAD LLSQ+F ++
Sbjct: 129 GVSIAEDRERAREKPLVVLATPGRLQQLIDEEILNFRDCSIVVLDEADMLLSQNFIRSIE 188
Query: 689 MVISRLP-KERQILLFSATF 745
++ K RQ L FSATF
Sbjct: 189 NCLAACSNKRRQTLFFSATF 208
Score = 39.5 bits (88), Expect = 0.086
Identities = 21/46 (45%), Positives = 33/46 (71%), Gaps = 3/46 (6%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDI--RVMVTTG 509
V+P KD IQAL+++ TRELA+QT+++ L+K+ D+ R+M G
Sbjct: 83 VNPAKDHIQALVLLHTRELAMQTAKVAKTLSKNMPDVTGRIMCAIG 128
>UniRef50_Q16XX4 Cluster: DEAD box ATP-dependent RNA helicase; n=5;
Neoptera|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 911
Score = 74.5 bits (175), Expect = 2e-12
Identities = 34/91 (37%), Positives = 61/91 (67%), Gaps = 2/91 (2%)
Frame = +2
Query: 482 RHSC--NGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADK 655
R++C G +G +RD + + V+V+IATPGR+ID +++ + + +C LVLDEAD+
Sbjct: 334 RYTCIFGGALKGPQVRD----LERGVEVVIATPGRLIDFLERGITNLRRCTYLVLDEADR 389
Query: 656 LLSQDFKGMLDMVISRLPKERQILLFSATFP 748
+L F+ + +I ++ +RQ+L++SAT+P
Sbjct: 390 MLDMGFEPQIRKIIEQIRPDRQVLMWSATWP 420
Score = 45.2 bits (102), Expect = 0.002
Identities = 23/57 (40%), Positives = 35/57 (61%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
+FEE ++ I + G+ P+ IQ PIALSG+D++ A+ G+GKT AY +P
Sbjct: 230 DFEEGNFPDFVMNEINKMGFPNPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYMLP 286
>UniRef50_Q0HYG8 Cluster: DEAD/DEAH box helicase domain protein;
n=62; Proteobacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain MR-7)
Length = 549
Score = 74.1 bits (174), Expect = 3e-12
Identities = 33/81 (40%), Positives = 53/81 (65%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + I ++ V V++ATPGR++DL+ + V K +Q +LVLDEAD++L F
Sbjct: 108 FGGVPINPQIQKLRHGVDVLVATPGRLLDLVQQNVVKFNQLEILVLDEADRMLDMGFIRD 167
Query: 683 LDMVISRLPKERQILLFSATF 745
+ +++ LP +RQ L+FSATF
Sbjct: 168 IKKILALLPAKRQNLMFSATF 188
Score = 60.1 bits (139), Expect = 6e-08
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSLPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
>UniRef50_A3ZWP8 Cluster: ATP-dependent RNA helicase; n=1;
Blastopirellula marina DSM 3645|Rep: ATP-dependent RNA
helicase - Blastopirellula marina DSM 3645
Length = 428
Score = 74.1 bits (174), Expect = 3e-12
Identities = 35/93 (37%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Frame = +2
Query: 476 THRHSCN--GYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
TH N Y G LR + ++ + +++ TPGR+IDLM ++ +++ R +VLDEA
Sbjct: 98 THGQRINVVAVYGGKPLRSQMEKLKRAPHIVVGTPGRVIDLMTRRALQLEMLRTVVLDEA 157
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ ++ ++ R P+ERQ LL SAT P
Sbjct: 158 DRMLDIGFRPDIEKILRRCPEERQTLLLSATVP 190
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
+ + L E+ + + +PSPIQ A IP+AL G+DVL +A+ GTGKT A+ IP++E+
Sbjct: 6 YADMALSVEMKAALEAARYIQPSPIQAAIIPLALEGRDVLGQARTGTGKTAAFGIPIIER 65
Query: 210 V 212
+
Sbjct: 66 L 66
>UniRef50_Q13206 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=24; Coelomata|Rep: Probable ATP-dependent RNA helicase
DDX10 - Homo sapiens (Human)
Length = 875
Score = 74.1 bits (174), Expect = 3e-12
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
GK H S G +L+ + RI N+ +++ TPGR++ MD+ V+ +MLVLDE
Sbjct: 165 GKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDETVSFHATDLQMLVLDE 223
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F ++ VI LPK+RQ LLFSAT
Sbjct: 224 ADRILDMGFADTMNAVIENLPKKRQTLLFSAT 255
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F +F L ++ L G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
>UniRef50_Q8A2K2 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Bacteroides
thetaiotaomicron
Length = 647
Score = 73.7 bits (173), Expect = 4e-12
Identities = 30/80 (37%), Positives = 54/80 (67%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G+++ I + + V +I+ATPGR++DLM+++ + +V+DEAD++L+ F
Sbjct: 107 YGGSSIDSQIRSLKRGVHIIVATPGRLLDLMERKTVSLSTVHNIVMDEADEMLNMGFTDS 166
Query: 683 LDMVISRLPKERQILLFSAT 742
++ +++ +PKER LLFSAT
Sbjct: 167 INAILADVPKERNTLLFSAT 186
Score = 57.2 bits (132), Expect = 4e-07
Identities = 28/62 (45%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 206
FEE + E+ I E G+E P P+QE IP L DV+A A+ GTGKT A+ +P+L+
Sbjct: 4 FEELGVSPEIRKAIEEMGYENPMPVQEEVIPYLLGENNDVVALAQTGTGKTAAFGLPLLQ 63
Query: 207 QV 212
Q+
Sbjct: 64 QI 65
>UniRef50_Q6AMK6 Cluster: Probable ATP-dependent RNA helicase; n=1;
Desulfotalea psychrophila|Rep: Probable ATP-dependent
RNA helicase - Desulfotalea psychrophila
Length = 632
Score = 73.7 bits (173), Expect = 4e-12
Identities = 32/80 (40%), Positives = 56/80 (70%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G++ + + + + +V++ TPGR++DL+ + K+DQ + LVLDEAD++LS F
Sbjct: 158 YGGSSYQAQVGGLRRGARVVVGTPGRLLDLIRQGSLKLDQLKTLVLDEADEMLSMGFIDD 217
Query: 683 LDMVISRLPKERQILLFSAT 742
++ ++S+ PK+RQ +LFSAT
Sbjct: 218 IETILSQTPKDRQTMLFSAT 237
Score = 63.3 bits (147), Expect = 6e-09
Identities = 25/61 (40%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F +F LK +L+ + + G+ +P+PIQE +IP+ L+G D++ +A+ GTGKT A+ +P+L
Sbjct: 57 FTDFNLKSDLVANLVKLGFSQPTPIQEKAIPLLLAGSDLIGQAQTGTGKTAAFGLPLLNN 116
Query: 210 V 212
+
Sbjct: 117 I 117
>UniRef50_Q31AC4 Cluster: DEAD/DEAH box helicase-like protein; n=7;
Prochlorococcus marinus|Rep: DEAD/DEAH box helicase-like
protein - Prochlorococcus marinus (strain MIT 9312)
Length = 593
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/82 (40%), Positives = 55/82 (67%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT+ R+ I + + V V++ TPGR++D + + K++ LVLDEAD++L+ F
Sbjct: 156 YGGTDYRNQIYALKRKVDVVVGTPGRIMDHIRQGTFKVNSINCLVLDEADEMLNMGFLED 215
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ +I +LPK +Q++LFSAT P
Sbjct: 216 IEWIIDQLPKNKQMVLFSATMP 237
Score = 62.9 bits (146), Expect = 8e-09
Identities = 25/63 (39%), Positives = 45/63 (71%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N F +F + +L + KG++ P+PIQ+A+IP + G+D+L +A+ GTGKT A+ +P++
Sbjct: 51 NGFLDFGFNQSILNSLSNKGYKNPTPIQKAAIPELMLGRDLLGQAQTGTGKTAAFALPLI 110
Query: 204 EQV 212
E++
Sbjct: 111 EKL 113
>UniRef50_Q087U7 Cluster: DEAD/DEAH box helicase domain protein;
n=5; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella frigidimarina (strain NCIMB
400)
Length = 421
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/80 (41%), Positives = 50/80 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + I ++ +++ATPGR++DL+ K+ + Q LV DEAD++L FK
Sbjct: 118 YGGVSIGEQIRQLANGTHILVATPGRLLDLLRKRALSLSQLTHLVFDEADRMLDMGFKDE 177
Query: 683 LDMVISRLPKERQILLFSAT 742
+ V+ RLP RQ LLFSAT
Sbjct: 178 IVEVLKRLPSTRQTLLFSAT 197
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L L+ + E +++P+PIQ +IP+ LSGKDV+A A+ GTGKT A+ +P+L Q
Sbjct: 3 FADLSLHPILINRLAELKYQQPTPIQLQAIPVILSGKDVMAGAQTGTGKTAAFALPLLHQ 62
Query: 210 VICY 221
++ +
Sbjct: 63 LLTH 66
>UniRef50_A3WD13 Cluster: DNA and RNA helicase; n=2;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Erythrobacter sp. NAP1
Length = 484
Score = 73.7 bits (173), Expect = 4e-12
Identities = 33/80 (41%), Positives = 52/80 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT++ D ++++ ++IATPGR++DL+D++ + +LVLDEAD++L F L
Sbjct: 112 GTSVNKDRNKLHRGTDILIATPGRLLDLIDQKAFNLGSVEVLVLDEADQMLDLGFVHALR 171
Query: 689 MVISRLPKERQILLFSATFP 748
+ +PKERQ L FSAT P
Sbjct: 172 RISQLVPKERQTLFFSATMP 191
Score = 57.2 bits (132), Expect = 4e-07
Identities = 24/62 (38%), Positives = 41/62 (66%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + L + +L + KG+ P+PIQE +IP L G+D+L A+ GTGKT A+ +P ++
Sbjct: 3 QFSDLGLSQPVLQALDLKGYSTPTPIQEQAIPPVLEGRDLLGIAQTGTGKTAAFMLPSID 62
Query: 207 QV 212
++
Sbjct: 63 RL 64
>UniRef50_A1G315 Cluster: DEAD/DEAH box helicase-like; n=2;
Salinispora|Rep: DEAD/DEAH box helicase-like -
Salinispora arenicola CNS205
Length = 633
Score = 73.7 bits (173), Expect = 4e-12
Identities = 36/98 (36%), Positives = 57/98 (58%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
DL G T Y G I + V++++ TPGR++DL ++ K+D+ R L
Sbjct: 201 DLQAAGSTRGVRVLPIYGGVAYEPQIEALRSGVEILVGTPGRLLDLAKQKHLKLDRVRAL 260
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDEAD++L F ++ +++ LP++RQ +LFSAT P
Sbjct: 261 VLDEADRMLDLGFLDDVERILAILPEDRQTMLFSATMP 298
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/62 (38%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++E + + G + IQE ++PIAL G D++ +A GTGKT + +P+LEQ
Sbjct: 112 FAELGARQETVDALAAAGITRAFAIQEYALPIALRGVDLIGQAPTGTGKTLGFGVPLLEQ 171
Query: 210 VI 215
V+
Sbjct: 172 VL 173
>UniRef50_A0VLH7 Cluster: DEAD/DEAH box helicase domain protein;
n=2; Rhodobacteraceae|Rep: DEAD/DEAH box helicase domain
protein - Dinoroseobacter shibae DFL 12
Length = 508
Score = 73.7 bits (173), Expect = 4e-12
Identities = 35/80 (43%), Positives = 50/80 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + I R + +I+ATPGR+IDL+D++ ++ + R LVLDEAD++L F L
Sbjct: 181 GVAIGPQIKRAERGADLIVATPGRLIDLLDRKALRLSETRFLVLDEADQMLDLGFIHALR 240
Query: 689 MVISRLPKERQILLFSATFP 748
+ LP ERQ +LFSAT P
Sbjct: 241 KIAPLLPAERQTMLFSATMP 260
Score = 52.4 bits (120), Expect = 1e-05
Identities = 24/63 (38%), Positives = 40/63 (63%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F+ L L+ G+ + P+PIQ +IP L+G+DVL A+ GTGKT A+ +P+L+
Sbjct: 72 DFDMLGLSPRLVAGLAAQNITDPTPIQTRAIPHGLNGRDVLGIAQTGTGKTAAFGLPLLD 131
Query: 207 QVI 215
++
Sbjct: 132 ALM 134
>UniRef50_Q4S1T3 Cluster: Chromosome undetermined SCAF14764, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF14764,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 447
Score = 73.3 bits (172), Expect = 6e-12
Identities = 30/63 (47%), Positives = 46/63 (73%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +PV++
Sbjct: 7 QFHEMGLDDRLLKAVADLGWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPVIQ 66
Query: 207 QVI 215
+++
Sbjct: 67 RIL 69
>UniRef50_Q9S531 Cluster: DEAD-box protein; n=4;
Cystobacterineae|Rep: DEAD-box protein - Myxococcus
xanthus
Length = 808
Score = 73.3 bits (172), Expect = 6e-12
Identities = 33/82 (40%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G +++ + + +I+ TPGR+ D +++ K+D C VLDEAD++L+Q F
Sbjct: 132 YGGASMKQQEDALEEGTPIIVGTPGRVFDHINRGNLKLDACDHAVLDEADEMLNQGFYEE 191
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ RLPK RQ+LLFSAT P
Sbjct: 192 VTRILDRLPKTRQVLLFSATVP 213
Score = 58.0 bits (134), Expect = 2e-07
Identities = 22/61 (36%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L + + + E+G+ P+P+Q + A+ GKD++ R+K GTGKT A+ +P+LE+
Sbjct: 31 FDDMNLSEPIRLALAERGYTNPTPVQARAFRPAIEGKDLIVRSKTGTGKTAAFGLPLLEK 90
Query: 210 V 212
+
Sbjct: 91 I 91
Score = 34.7 bits (76), Expect = 2.4
Identities = 16/41 (39%), Positives = 25/41 (60%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
++ALI+ PTRELALQ + LAKH +++ G + +
Sbjct: 98 VRALILCPTRELALQVADELKMLAKHKGLKIAAIYGGASMK 138
>UniRef50_Q9SEV5 Cluster: RNA helicase; n=1; Guillardia theta|Rep:
RNA helicase - Guillardia theta (Cryptomonas phi)
Length = 381
Score = 73.3 bits (172), Expect = 6e-12
Identities = 31/62 (50%), Positives = 49/62 (79%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F++ LK +LL+G+ + G+E PS IQE IP+A++ KD+LAR+KNGTGKT ++ IP+L+
Sbjct: 16 KFKDLKLKNDLLLGLNDLGYEHPSLIQEKIIPLAINNKDILARSKNGTGKTLSFLIPILQ 75
Query: 207 QV 212
+
Sbjct: 76 NI 77
Score = 49.2 bits (112), Expect = 1e-04
Identities = 28/65 (43%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQD-FKGMLDMVISRLPKERQILLF 733
+++ TPG++ D + K C+ LVLDEADKLLS + + L ++ K QI+LF
Sbjct: 133 ILLGTPGKIYDCLCKNEVNKT-CKTLVLDEADKLLSGEVYDTTLKILNHYKNKISQIMLF 191
Query: 734 SATFP 748
SATFP
Sbjct: 192 SATFP 196
Score = 33.9 bits (74), Expect = 4.3
Identities = 17/35 (48%), Positives = 27/35 (77%), Gaps = 1/35 (2%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKH-TDIRVMVT 503
I+++I+VPTRELALQ S + +L+K+ +I + VT
Sbjct: 84 IESIILVPTRELALQISSLLRKLSKYMKNINLQVT 118
>UniRef50_Q3AX69 Cluster: DEAD/DEAH box helicase-like; n=15;
Cyanobacteria|Rep: DEAD/DEAH box helicase-like -
Synechococcus sp. (strain CC9902)
Length = 624
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/82 (41%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT+ R I + + V V++ TPGR++D M + LVLDEAD++L F
Sbjct: 175 YGGTDFRSQISTLRRGVDVVVGTPGRVMDHMRQGTLDTSGLTSLVLDEADEMLRMGFIDD 234
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ +LPKERQ++LFSAT P
Sbjct: 235 VEWILEQLPKERQVVLFSATMP 256
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ F LL + +KG+ PSPIQ+A+ P + G+D++ +A+ GTGKT A+ +P+LE+
Sbjct: 73 FDGFGFSEALLKTLADKGYSDPSPIQKAAFPELMLGRDLVGQAQTGTGKTAAFALPLLER 132
Query: 210 V 212
+
Sbjct: 133 L 133
>UniRef50_O66866 Cluster: ATP-dependent RNA helicase DeaD; n=1;
Aquifex aeolicus|Rep: ATP-dependent RNA helicase DeaD -
Aquifex aeolicus
Length = 293
Score = 72.9 bits (171), Expect = 8e-12
Identities = 35/84 (41%), Positives = 52/84 (61%), Gaps = 1/84 (1%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQN-VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
+Y GT + D+ + V V+I TPGR+ DL+++ K D R VLDE D +L +FK
Sbjct: 71 FYGGTKVFGDLKVLRGGKVDVVIGTPGRIKDLIERGALKTDDVRYFVLDEVDVMLDMNFK 130
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
+D + S+LP+E+Q+ SATFP
Sbjct: 131 EDIDFIYSQLPEEKQVFFVSATFP 154
Score = 43.2 bits (97), Expect = 0.007
Identities = 17/33 (51%), Positives = 25/33 (75%)
Frame = +3
Query: 114 SIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+IP+AL G+D L +AK GTGKT A+ +P+L +
Sbjct: 2 TIPVALQGRDCLIQAKTGTGKTAAFGLPILNSL 34
>UniRef50_Q11TW3 Cluster: Possible ATP-dependent RNA helicase; n=5;
Bacteria|Rep: Possible ATP-dependent RNA helicase -
Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB 9469)
Length = 388
Score = 72.9 bits (171), Expect = 8e-12
Identities = 34/80 (42%), Positives = 55/80 (68%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ ++++ Q V+++IATPGR++DL+D + + +LVLDEADK+L+ FK
Sbjct: 118 YGGVSINPQMIQL-QGVEILIATPGRLLDLVDSKAVYLSDVEVLVLDEADKMLNLGFKEE 176
Query: 683 LDMVISRLPKERQILLFSAT 742
+ + LP++RQ LLFSAT
Sbjct: 177 MANIFKLLPQKRQNLLFSAT 196
Score = 50.8 bits (116), Expect = 3e-05
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L +L + ++ + P PIQE +IP L GKD+L A+ G+GKT ++ +P+L+
Sbjct: 11 FATLGLSPAILKALEKQFYNAPYPIQEQAIPAILKGKDILGIAQTGSGKTASFVLPILQM 70
Query: 210 V 212
+
Sbjct: 71 L 71
>UniRef50_Q9SQV1 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 40; n=2; core eudicotyledons|Rep: Probable
DEAD-box ATP-dependent RNA helicase 40 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 1088
Score = 72.9 bits (171), Expect = 8e-12
Identities = 29/93 (31%), Positives = 56/93 (60%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G++ R SC Y G + + + +++ATPGR+ D+++ ++ Q +LVLDEA
Sbjct: 531 GRSSRISCTCLYGGAPKGPQLKELERGADIVVATPGRLNDILEMKMIDFQQVSLLVLDEA 590
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ + +++ +P RQ L+++AT+P
Sbjct: 591 DRMLDMGFEPQIRKIVNEIPPRRQTLMYTATWP 623
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/56 (44%), Positives = 34/56 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
FE L E+L + G+ P+PIQ + PIAL +D++A AK G+GKT Y IP
Sbjct: 437 FESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQSRDIVAIAKTGSGKTLGYLIP 492
>UniRef50_Q80Y44 Cluster: Probable ATP-dependent RNA helicase DDX10;
n=14; Eutheria|Rep: Probable ATP-dependent RNA helicase
DDX10 - Mus musculus (Mouse)
Length = 875
Score = 72.9 bits (171), Expect = 8e-12
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
GK H S G +L+ + RI N+ +++ TPGR++ MD+ + +MLVLDE
Sbjct: 165 GKNHDFSAGLIIGGKDLKHEAERI-NNINILVCTPGRLLQHMDETICFHATNLQMLVLDE 223
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F ++ +I LPK+RQ LLFSAT
Sbjct: 224 ADRILDMGFADTMNAIIENLPKKRQTLLFSAT 255
Score = 55.6 bits (128), Expect = 1e-06
Identities = 27/59 (45%), Positives = 39/59 (66%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F +F L ++ L G+ E + + IQ+ +I +AL GKDVL AK G+GKT A+ +PVLE
Sbjct: 71 FSDFPLSKKTLKGLQEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVLE 129
>UniRef50_UPI00015B61D8 Cluster: PREDICTED: similar to vasa-like
protein; n=1; Nasonia vitripennis|Rep: PREDICTED:
similar to vasa-like protein - Nasonia vitripennis
Length = 732
Score = 72.5 bits (170), Expect = 1e-11
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQD 670
C+ Y GT+ + +I+Q V +++ATPGR++DL+ K D +VLDEAD++L
Sbjct: 412 CHIIYGGTSTSHQMKQIFQGVDILVATPGRLLDLVGKGKITFDAIEFVVLDEADRMLDMG 471
Query: 671 FKGMLDMVI----SRLPKERQILLFSATFP 748
F ++ V+ + P ERQ L+FSATFP
Sbjct: 472 FLPDVEKVLRHDTMKPPGERQTLMFSATFP 501
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/64 (40%), Positives = 44/64 (68%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F+E L+ L I + G+ KP+P+Q+ IPI LSG+D++A A+ G+GKT A+ IP++
Sbjct: 302 SSFDEANLRVLLNTNIKKSGYTKPTPVQKYGIPILLSGRDLMACAQTGSGKTAAFLIPII 361
Query: 204 EQVI 215
++
Sbjct: 362 HTLL 365
>UniRef50_Q08Q14 Cluster: HeliCase, c-terminal:dead/deah box
helicase, n-terminal; n=3; Bacteria|Rep: HeliCase,
c-terminal:dead/deah box helicase, n-terminal -
Stigmatella aurantiaca DW4/3-1
Length = 608
Score = 72.5 bits (170), Expect = 1e-11
Identities = 32/82 (39%), Positives = 53/82 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + + V V++ATPGR +D + ++ K++Q R++VLDEAD++L F
Sbjct: 142 YGGQVISQQLRVLKRGVDVVVATPGRALDHLQRKTLKLEQVRVVVLDEADEMLDMGFAED 201
Query: 683 LDMVISRLPKERQILLFSATFP 748
L+ ++S P++RQ LFSAT P
Sbjct: 202 LEAILSSTPEKRQTALFSATLP 223
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/63 (42%), Positives = 41/63 (65%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N FE L L+ + G+E+P+PIQ A++P L GKD+L A GTGKT A+ +P+L
Sbjct: 36 NTFESLGLLPPLVEALSALGYEEPTPIQRAALPPLLEGKDLLGIAATGTGKTAAFSLPLL 95
Query: 204 EQV 212
+++
Sbjct: 96 QRI 98
>UniRef50_A6DHU9 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Lentisphaera araneosa HTCC2155|Rep: DEAD/DEAH box
helicase-like protein - Lentisphaera araneosa HTCC2155
Length = 412
Score = 72.5 bits (170), Expect = 1e-11
Identities = 35/80 (43%), Positives = 52/80 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N+ I ++ + V+IATPGR+I+L++ ++ + ML+LDEADK+L F L
Sbjct: 113 GENIDGQIRKLRMGLDVLIATPGRIIELINLGEVRLVELEMLILDEADKMLDLGFADELK 172
Query: 689 MVISRLPKERQILLFSATFP 748
++ LPK+RQ LLFSAT P
Sbjct: 173 ELLEALPKKRQNLLFSATLP 192
Score = 44.0 bits (99), Expect = 0.004
Identities = 20/61 (32%), Positives = 35/61 (57%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE+ L + + + + IQ +IP+ GKD+LA ++ GTGKT A+ P++E+
Sbjct: 3 FEQLNFPDYLSRAVDNLNFSEATDIQAKAIPLIQEGKDLLAESQTGTGKTLAFSFPLIER 62
Query: 210 V 212
+
Sbjct: 63 I 63
>UniRef50_Q9LYJ9 Cluster: DEAD-box ATP-dependent RNA helicase 46;
n=16; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
46 - Arabidopsis thaliana (Mouse-ear cress)
Length = 645
Score = 72.5 bits (170), Expect = 1e-11
Identities = 31/93 (33%), Positives = 57/93 (61%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK+ + SC Y G + I + V +++ATPGR+ D+++ + + Q LVLDEA
Sbjct: 257 GKSSKISCACLYGGAPKGPQLKEIERGVDIVVATPGRLNDILEMKRISLHQVSYLVLDEA 316
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ + +++ +P +RQ L+++AT+P
Sbjct: 317 DRMLDMGFEPQIRKIVNEVPTKRQTLMYTATWP 349
Score = 56.4 bits (130), Expect = 7e-07
Identities = 27/56 (48%), Positives = 35/56 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
FE L ELL ++ G+ PSPIQ S PIA+ +D++A AK G+GKT Y IP
Sbjct: 163 FEATGLPNELLREVYSAGFSAPSPIQAQSWPIAMQNRDIVAIAKTGSGKTLGYLIP 218
>UniRef50_Q7VFA9 Cluster: ATP-dependent RNA helicase DeaD; n=6;
Helicobacteraceae|Rep: ATP-dependent RNA helicase DeaD -
Helicobacter hepaticus
Length = 530
Score = 72.1 bits (169), Expect = 1e-11
Identities = 35/66 (53%), Positives = 47/66 (71%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
+ DT+G F+ F LK +L GI E G+ PSP+Q SIPI L GKD++A+A+ GTGKT A
Sbjct: 41 KQDTQG--FDVFGLKDFVLKGIREAGFSTPSPVQSQSIPIILQGKDLIAQAQTGTGKTAA 98
Query: 186 YCIPVL 203
+ IP+L
Sbjct: 99 FAIPIL 104
Score = 54.8 bits (126), Expect = 2e-06
Identities = 29/83 (34%), Positives = 50/83 (60%), Gaps = 1/83 (1%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKG 679
Y G +++ + + + +IATPGR++D L + ++A +++VLDE+D++L F
Sbjct: 147 YGGQSIKRQCDLLEKKPKAMIATPGRLLDHLQNGRIAHFSP-QIVVLDESDEMLDMGFLD 205
Query: 680 MLDMVISRLPKERQILLFSATFP 748
++ + LP RQ LLFSAT P
Sbjct: 206 DIEEIFKFLPNTRQTLLFSATMP 228
Score = 35.9 bits (79), Expect = 1.1
Identities = 16/41 (39%), Positives = 27/41 (65%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
I+ALI+ PTRELA+Q S+ ++L + I+ + G Q+ +
Sbjct: 113 IEALIITPTRELAMQISEEILKLGRFGRIKTICMYGGQSIK 153
>UniRef50_Q0G0P8 Cluster: Superfamily II DNA and RNA helicase; n=2;
Aurantimonadaceae|Rep: Superfamily II DNA and RNA
helicase - Fulvimarina pelagi HTCC2506
Length = 457
Score = 72.1 bits (169), Expect = 1e-11
Identities = 29/82 (35%), Positives = 54/82 (65%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++R I + + V +++ATPGR++DLM+++ + + R L+LDEAD++L F
Sbjct: 112 FGGVSVRPQIQALARGVDILVATPGRLLDLMEQRAIDLRETRHLILDEADRMLDMGFVRD 171
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ + P +RQ ++FSAT P
Sbjct: 172 VMKIVGKCPDDRQSMMFSATMP 193
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/62 (40%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ F L L + P+PIQE +IP AL+G+D+L A+ GTGKT A+ +P+L
Sbjct: 6 FDGFGLAEPLTRALARLELTTPTPIQERAIPHALAGRDMLGIAQTGTGKTAAFALPLLHH 65
Query: 210 VI 215
++
Sbjct: 66 LM 67
>UniRef50_A0KTC9 Cluster: DEAD/DEAH box helicase domain protein;
n=132; Bacteria|Rep: DEAD/DEAH box helicase domain
protein - Shewanella sp. (strain ANA-3)
Length = 578
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/81 (39%), Positives = 52/81 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + I ++ V V++ATPGR++DL ++ K +Q +LVLDEAD++L F
Sbjct: 108 FGGVPINPQIQKLRHGVDVLVATPGRLLDLEQQKAVKFNQLEVLVLDEADRMLDMGFIRD 167
Query: 683 LDMVISRLPKERQILLFSATF 745
+ +++ LP +RQ L+FSATF
Sbjct: 168 IKKILAMLPAKRQNLMFSATF 188
Score = 60.5 bits (140), Expect = 4e-08
Identities = 26/59 (44%), Positives = 38/59 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F L + + E+G++ PSPIQ +IP L+GKDV+A A+ GTGKT + +P+LE
Sbjct: 3 FSSLGLSAPIQKAVTEQGYDTPSPIQAQAIPAVLTGKDVMAAAQTGTGKTAGFTLPLLE 61
>UniRef50_Q24I45 Cluster: DEAD/DEAH box helicase family protein;
n=2; Tetrahymena thermophila|Rep: DEAD/DEAH box helicase
family protein - Tetrahymena thermophila SB210
Length = 713
Score = 72.1 bits (169), Expect = 1e-11
Identities = 33/93 (35%), Positives = 55/93 (59%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK+ + C Y G + + Q V V+IATPGR+ID ++ + + + LVLDEA
Sbjct: 198 GKSSKLKCACIYGGADKYSQRALLQQGVDVVIATPGRLIDFLESETTTLRRVTYLVLDEA 257
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ + ++ ++ +RQ L+FSAT+P
Sbjct: 258 DRMLDMGFEIQIRKILGQIRPDRQTLMFSATWP 290
Score = 46.0 bits (104), Expect = 0.001
Identities = 18/43 (41%), Positives = 30/43 (69%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+EKPSPIQ + P+ LSG D++ A+ G+GKT ++ +P + +
Sbjct: 121 FEKPSPIQSLAFPVVLSGHDLIGIAETGSGKTLSFLLPSIVHI 163
>UniRef50_P96614 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=90; Bacilli|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Bacillus subtilis
Length = 494
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/98 (32%), Positives = 59/98 (60%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+LY G+ R Y G ++ I + +N +I+ TPGR++D ++++ +++ +
Sbjct: 90 ELYKIGQDKRAKVLPIYGGQDIGRQIRALKKNPNIIVGTPGRLLDHINRRTIRLNNVNTV 149
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
V+DEAD++L+ F ++ ++S +P E Q LLFSAT P
Sbjct: 150 VMDEADEMLNMGFIDDIESILSNVPSEHQTLLFSATMP 187
Score = 63.7 bits (148), Expect = 5e-09
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F L +L+ I G+E+ +PIQ +IP+ LS KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FQDFNLSSDLMKAINRMGFEEATPIQAQTIPLGLSNKDVIGQAQTGTGKTAAFGIPLVEK 64
Query: 210 V 212
+
Sbjct: 65 I 65
Score = 37.5 bits (83), Expect = 0.35
Identities = 15/45 (33%), Positives = 28/45 (62%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQ 515
++P+ IQA+++ PTRELA+Q S+ ++ + +V+ G Q
Sbjct: 65 INPESPNIQAIVIAPTRELAIQVSEELYKIGQDKRAKVLPIYGGQ 109
>UniRef50_Q9NY93 Cluster: Probable ATP-dependent RNA helicase DDX56;
n=25; Theria|Rep: Probable ATP-dependent RNA helicase
DDX56 - Homo sapiens (Human)
Length = 547
Score = 72.1 bits (169), Expect = 1e-11
Identities = 32/68 (47%), Positives = 46/68 (67%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
D+ FE L LL + + GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY
Sbjct: 3 DSEALGFEHMGLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYA 62
Query: 192 IPVLEQVI 215
IP+L+ ++
Sbjct: 63 IPMLQLLL 70
Score = 46.4 bits (105), Expect = 7e-04
Identities = 24/70 (34%), Positives = 39/70 (55%), Gaps = 1/70 (1%)
Frame = +2
Query: 539 IYQNVQVIIATPGRMIDLMDKQVAKM-DQCRMLVLDEADKLLSQDFKGMLDMVISRLPKE 715
+ + V++ TP R++ + + K+ D +LV+DEAD L S F+ L ++ LP+
Sbjct: 131 LMEKPDVVVGTPSRILSHLQQDSLKLRDSLELLVVDEADLLFSFGFEEELKSLLCHLPRI 190
Query: 716 RQILLFSATF 745
Q L SATF
Sbjct: 191 YQAFLMSATF 200
>UniRef50_Q5FLW7 Cluster: RNA helicase; n=9; Lactobacillus|Rep: RNA
helicase - Lactobacillus acidophilus
Length = 453
Score = 71.7 bits (168), Expect = 2e-11
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQN--VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKL 658
H + G R+ + YQN Q++IATPGR++D + K+V +DQ + V+DEAD
Sbjct: 101 HFSIAHLAGGTDRERQLEKYQNNTPQLVIATPGRLLDFVQKKVFAVDQVKTFVIDEADMT 160
Query: 659 LSQDFKGMLDMVISRLPKERQILLFSATFP 748
L F +D V S++PK+ QI FSAT P
Sbjct: 161 LDMGFLSDIDQVASKMPKDVQIAAFSATIP 190
Score = 46.8 bits (106), Expect = 6e-04
Identities = 22/63 (34%), Positives = 36/63 (57%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N FE+ + L G+ + + KP+ +QE IP LS V+ +A G+GKT AY +P+
Sbjct: 3 NIFEDSRINPALQEGLKKINFVKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVPIF 62
Query: 204 EQV 212
++
Sbjct: 63 NEI 65
>UniRef50_Q12B10 Cluster: DEAD/DEAH box helicase-like; n=13;
Proteobacteria|Rep: DEAD/DEAH box helicase-like -
Polaromonas sp. (strain JS666 / ATCC BAA-500)
Length = 422
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++ +M + +++ATPGR++DL++ K+ + LVLDEAD+LL F
Sbjct: 114 FGGVSINPQMMNLRGGADIVVATPGRLLDLLEHNALKISEVSTLVLDEADRLLDLGFGEE 173
Query: 683 LDMVISRLPKERQILLFSATFP 748
L ++ LP RQ L FSATFP
Sbjct: 174 LGRILELLPPRRQNLFFSATFP 195
Score = 52.4 bits (120), Expect = 1e-05
Identities = 22/51 (43%), Positives = 35/51 (68%)
Frame = +3
Query: 60 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L I +KG+ P+ IQ +IP L G+DV+ A+ G+GKT A+ +P+L+Q+
Sbjct: 17 LRAIGDKGYRAPTAIQSQAIPAILLGRDVVGSAQTGSGKTAAFALPMLQQL 67
>UniRef50_A4BET4 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Reinekea sp. MED297|Rep: DEAD/DEAH box helicase-like
protein - Reinekea sp. MED297
Length = 579
Score = 71.7 bits (168), Expect = 2e-11
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++R+ + + QN QVI+ TPGR++D + + + + LVLDEAD++L F
Sbjct: 109 YGGADMRNQLRALKQNPQVIVGTPGRVMDHLRRGTLDLSDLKHLVLDEADEMLRMGFIED 168
Query: 683 LDMVISRLPKERQILLFSATFP 748
+D ++ PK++Q LFSAT P
Sbjct: 169 IDWILEHTPKDKQTALFSATMP 190
Score = 51.2 bits (117), Expect = 3e-05
Identities = 25/61 (40%), Positives = 36/61 (59%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L LL + G+E P+PIQ +I L G DVL A+ GTGKT A+ +P+L +
Sbjct: 7 FADLGLAPVLLKTLDSLGYETPTPIQSQAIVQLLDGNDVLGLAQTGTGKTAAFSLPLLSR 66
Query: 210 V 212
+
Sbjct: 67 I 67
>UniRef50_Q5L3G9 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=7; Bacteria|Rep: DEAD-box ATP-dependent RNA helicase
ydbR - Geobacillus kaustophilus
Length = 467
Score = 71.7 bits (168), Expect = 2e-11
Identities = 35/98 (35%), Positives = 58/98 (59%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+LY G R Y G ++ I + ++ VI+ TPGR+ID +++ +++ +
Sbjct: 89 ELYKIGAVKRVRVLPIYGGQDIERQIRALKKHPHVIVGTPGRIIDHINRGTLRLEHVHTV 148
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDEAD++L+ F ++ ++S +P ERQ LLFSAT P
Sbjct: 149 VLDEADEMLNMGFIEDIEAILSHVPAERQTLLFSATMP 186
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+E L +E++ I G+E+ +PIQ +IP++L KDV+ +A+ GTGKT A+ IP++E+
Sbjct: 4 FQELGLSQEVMKAIERMGFEETTPIQAKTIPLSLQNKDVIGQAQTGTGKTAAFGIPIVEK 63
Query: 210 V 212
V
Sbjct: 64 V 64
Score = 39.9 bits (89), Expect = 0.065
Identities = 19/48 (39%), Positives = 28/48 (58%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
V+ K +QAL+V PTRELA+Q S+ ++ +RV+ G Q E
Sbjct: 64 VNVKNSAVQALVVAPTRELAIQVSEELYKIGAVKRVRVLPIYGGQDIE 111
>UniRef50_UPI00015BD198 Cluster: UPI00015BD198 related cluster; n=1;
unknown|Rep: UPI00015BD198 UniRef100 entry - unknown
Length = 364
Score = 71.3 bits (167), Expect = 2e-11
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 1/98 (1%)
Frame = +2
Query: 458 LY*TGKTHRHSCNGYYRGTNLRDDIMRIY-QNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+Y K R S +Y GT+++ ++ + +NV ++I TPGR+ DL+D++ + + L
Sbjct: 88 IYMLTKYKRLSSYVFYGGTSVKQNLDILQNKNVDILIGTPGRIKDLIDRKALNLSKVEYL 147
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDE D++L F ++ +IS LPKER +FSAT P
Sbjct: 148 VLDEFDQMLDMGFIEDIEYIISFLPKERTTYMFSATVP 185
Score = 62.5 bits (145), Expect = 1e-08
Identities = 26/56 (46%), Positives = 41/56 (73%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L EL + + G+++P+PIQ +IP+AL G D+L +A GTGKTGA+ IP++E++
Sbjct: 7 LSLELQKALEDAGYKEPTPIQRDAIPLALEGYDILGQAATGTGKTGAFAIPIVEKL 62
>UniRef50_Q6MHS8 Cluster: ATP-dependent RNA helicase; n=1;
Bdellovibrio bacteriovorus|Rep: ATP-dependent RNA
helicase - Bdellovibrio bacteriovorus
Length = 549
Score = 71.3 bits (167), Expect = 2e-11
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT + V+ I+ATPGR+IDL + + + Q R +V DEAD++ FK
Sbjct: 127 YGGTGYDKQKEALKNGVEFIVATPGRLIDLYKEHLVDLKQVRAIVFDEADRMFDMGFKDD 186
Query: 683 LDMVISRLPKERQILLFSAT 742
+ ++ R+P+ERQ+L+FSAT
Sbjct: 187 MKYILQRVPRERQLLVFSAT 206
Score = 59.7 bits (138), Expect = 8e-08
Identities = 28/63 (44%), Positives = 41/63 (65%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L +LL I + ++ +PIQE +IP L GKDV A+ GTGKT A+ IPV+E
Sbjct: 2 KFSELNLDSQLLSAIQKLNYDDCTPIQEQAIPPVLDGKDVAGLAQTGTGKTAAFVIPVME 61
Query: 207 QVI 215
+++
Sbjct: 62 RIL 64
>UniRef50_Q67NW1 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase -
Symbiobacterium thermophilum
Length = 526
Score = 71.3 bits (167), Expect = 2e-11
Identities = 35/93 (37%), Positives = 52/93 (55%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G+ R Y G ++ I + V V+I TPGR++D + + + Q RM+VLDEA
Sbjct: 98 GRHARVKTIAIYGGQSIERQIRSLRFGVDVVIGTPGRILDHLGRSTLDLSQVRMVVLDEA 157
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F ++ ++ P ERQ LLFSAT P
Sbjct: 158 DEMLDMGFIEDIEKILQNTPAERQTLLFSATMP 190
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L ++L + + G+E+PSPIQ +IP L GKDV+ +A+ GTGKT A+ +P++E+
Sbjct: 8 FRDLALSEKVLKALDDMGFEEPSPIQAQAIPALLQGKDVIGQAQTGTGKTAAFGVPIVER 67
Query: 210 VI 215
++
Sbjct: 68 LV 69
Score = 40.3 bits (90), Expect = 0.049
Identities = 15/46 (32%), Positives = 29/46 (63%)
Frame = +3
Query: 387 PKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
P + +QAL++ PTRELA+Q ++ ++ +H ++ + G Q+ E
Sbjct: 70 PGQRAVQALVLTPTRELAIQVAEEITKIGRHARVKTIAIYGGQSIE 115
>UniRef50_A0KXT6 Cluster: DEAD/DEAH box helicase domain protein;
n=22; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain ANA-3)
Length = 491
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/80 (38%), Positives = 53/80 (66%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + R+ + V +++ATPGR++D+ ++ + D+ +LVLDEAD++L F
Sbjct: 108 YGGVDAAPQKKRLIEGVDLLVATPGRLLDMYTQRAIRFDEVSVLVLDEADRMLDMGFIED 167
Query: 683 LDMVISRLPKERQILLFSAT 742
++ +I +LP++RQ LLFSAT
Sbjct: 168 INSIIEKLPEQRQNLLFSAT 187
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/60 (41%), Positives = 39/60 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L L+ + E G+ P+PIQ +IP L+GK+VLA A+ GTGKT ++ +P+L +
Sbjct: 3 FSQLGLHSALVKAVTELGYTTPTPIQTKAIPSILAGKNVLAAAQTGTGKTASFVLPLLHR 62
>UniRef50_Q011U7 Cluster: Myc-regulated DEAD/H box 18 RNA
helicase-like; n=9; Eukaryota|Rep: Myc-regulated DEAD/H
box 18 RNA helicase-like - Ostreococcus tauri
Length = 2729
Score = 71.3 bits (167), Expect = 2e-11
Identities = 40/93 (43%), Positives = 58/93 (62%), Gaps = 3/93 (3%)
Frame = +2
Query: 479 HRHSCNGYYRGTNLRDDIMRIY-QNVQVIIATPGRMIDLMDK-QVAKMDQ-CRMLVLDEA 649
H C + GTN+ + R+ + V+ +IATPGR+ID + +A+ Q +LVLDEA
Sbjct: 2301 HPFKCQVVFGGTNINSERKRLKTEPVEFLIATPGRLIDHFESGDLARACQNLDVLVLDEA 2360
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D+LL F+ L+ ++S LP +RQ LLFSAT P
Sbjct: 2361 DQLLDMGFRPSLEKILSFLPNQRQTLLFSATVP 2393
Score = 45.2 bits (102), Expect = 0.002
Identities = 18/44 (40%), Positives = 31/44 (70%)
Frame = +3
Query: 81 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
G+ + +Q+A++P + G DVLARAK G+GKT + +P +E++
Sbjct: 2221 GFTHATSVQDATLPHIMQGLDVLARAKTGSGKTVGFLLPAIERL 2264
>UniRef50_Q2NEZ7 Cluster: Predicted helicase; n=6; cellular
organisms|Rep: Predicted helicase - Methanosphaera
stadtmanae (strain DSM 3091)
Length = 583
Score = 71.3 bits (167), Expect = 2e-11
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I + + VQ+II TPGR++D +D+ ++ + ++LDEAD++L F+
Sbjct: 108 YGGQPIDRQIKALQKGVQIIIGTPGRVMDHIDRGTLSLNNIKTVILDEADEMLDMGFRED 167
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ +P ERQ LLFSAT P
Sbjct: 168 IEYILEDIPYERQFLLFSATLP 189
Score = 56.4 bits (130), Expect = 7e-07
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F++ + E+ + + G+E+ SPIQ +IP L+ KDV +A+ GTGKT A+ IP+LE
Sbjct: 5 KFKDLNISPEIQKAVADMGFEEASPIQSLAIPQILAHKDVTGQAQTGTGKTAAFGIPLLE 64
Query: 207 QV 212
+
Sbjct: 65 NI 66
>UniRef50_Q9V3C0 Cluster: ATP-dependent RNA helicase abstrakt; n=7;
Eukaryota|Rep: ATP-dependent RNA helicase abstrakt -
Drosophila melanogaster (Fruit fly)
Length = 619
Score = 71.3 bits (167), Expect = 2e-11
Identities = 29/70 (41%), Positives = 48/70 (68%)
Frame = +2
Query: 539 IYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKER 718
I + V +++ATPGR++D++DK++ +D CR L +DEAD+++ F+ + + S +R
Sbjct: 306 ISRGVHIVVATPGRLMDMLDKKILTLDMCRYLCMDEADRMIDMGFEEDVRTIFSFFKGQR 365
Query: 719 QILLFSATFP 748
Q LLFSAT P
Sbjct: 366 QTLLFSATMP 375
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/58 (36%), Positives = 35/58 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
F E + +L G+ KG + P+PIQ +P L+G+D++ A G+GKT + +PV+
Sbjct: 179 FREMKFPKGILNGLAAKGIKNPTPIQVQGLPTVLAGRDLIGIAFTGSGKTLVFVLPVI 236
>UniRef50_Q0HKH0 Cluster: DEAD/DEAH box helicase domain protein;
n=37; Gammaproteobacteria|Rep: DEAD/DEAH box helicase
domain protein - Shewanella sp. (strain MR-4)
Length = 427
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/82 (39%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++ + + V++ATPGR++DL+ K+++ LVLDEAD++LS F
Sbjct: 120 FGGVSVNLQMQSLRAGADVLVATPGRLLDLLASNALKLNRVLALVLDEADRMLSLGFTDE 179
Query: 683 LDMVISRLPKERQILLFSATFP 748
L+ V+ LP ++Q LL+SATFP
Sbjct: 180 LNQVLEALPAKKQTLLYSATFP 201
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E + L + E + P+PIQ A+IP LSG+DVLA A G+GKT A+ +P+L++
Sbjct: 11 FAELGIIAPLCNRLTELTYAAPTPIQAATIPAVLSGRDVLAGANTGSGKTAAFAVPLLQR 70
Query: 210 V 212
+
Sbjct: 71 L 71
>UniRef50_Q0FAJ4 Cluster: Dead-box ATP-dependent RNA helicase; n=6;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - alpha proteobacterium HTCC2255
Length = 531
Score = 70.9 bits (166), Expect = 3e-11
Identities = 32/78 (41%), Positives = 54/78 (69%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G +R + + + V +++ATPGR+ DL+D++ ++D+ + LVLDEAD++L F +
Sbjct: 213 GAPIRKQMRDLSKGVDILVATPGRLEDLVDQKGLRLDETKFLVLDEADQMLDIGFLPAVK 272
Query: 689 MVISRLPKERQILLFSAT 742
+IS++ K+RQ LLFSAT
Sbjct: 273 RIISKVNKDRQTLLFSAT 290
Score = 53.6 bits (123), Expect = 5e-06
Identities = 22/62 (35%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L E++ + G+ P+PIQ +IP L+ KD++ A+ GTGKT A+ +P+++Q
Sbjct: 105 FSKLGLDAEIVKALGFLGYTLPTPIQSQAIPAVLNSKDLVGLAQTGTGKTAAFALPLIQQ 164
Query: 210 VI 215
++
Sbjct: 165 LL 166
>UniRef50_Q8MZI3 Cluster: GH10652p; n=2; Drosophila
melanogaster|Rep: GH10652p - Drosophila melanogaster
(Fruit fly)
Length = 818
Score = 70.9 bits (166), Expect = 3e-11
Identities = 34/94 (36%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Frame = +2
Query: 476 TH-RHSC--NGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDE 646
TH R++C G +G RD + + V+++IATPGR+ID +++ + +C LVLDE
Sbjct: 257 THVRNTCIFGGAPKGQQARD----LERGVEIVIATPGRLIDFLERGTTSLKRCTYLVLDE 312
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
AD++L F+ + ++ ++ +RQ+L++SAT+P
Sbjct: 313 ADRMLDMGFEPQIRKIMQQIRPDRQVLMWSATWP 346
Score = 49.6 bits (113), Expect = 8e-05
Identities = 24/62 (38%), Positives = 39/62 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
EFEE ++ I ++G+ KP+ IQ PIA+SG+D++ A+ G+GKT AY +P +
Sbjct: 158 EFEEGGFPDYVMNEIRKQGFAKPTAIQAQGWPIAMSGRDLVGVAQTGSGKTLAYVLPAVV 217
Query: 207 QV 212
+
Sbjct: 218 HI 219
Score = 33.9 bits (74), Expect = 4.3
Identities = 14/28 (50%), Positives = 19/28 (67%)
Frame = +3
Query: 408 ALIVVPTRELALQTSQICIELAKHTDIR 491
AL++ PTRELA Q Q+ IE +T +R
Sbjct: 233 ALVLAPTRELAQQIQQVAIEFGSNTHVR 260
>UniRef50_Q54TJ4 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 783
Score = 70.9 bits (166), Expect = 3e-11
Identities = 31/62 (50%), Positives = 46/62 (74%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FEE L R LL + + G+ +P+PIQ +IP+AL+GKD+LA A G+GKT A+ +PVLE+
Sbjct: 192 FEELHLSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILASASTGSGKTAAFLLPVLER 251
Query: 210 VI 215
++
Sbjct: 252 LL 253
Score = 61.7 bits (143), Expect = 2e-08
Identities = 29/71 (40%), Positives = 46/71 (64%), Gaps = 1/71 (1%)
Frame = +2
Query: 533 MRIYQNVQVIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLP 709
+ + ++ V+IATPGR+ID L++ +D +L+LDEAD+LL FK ++ ++ P
Sbjct: 306 VELRKSPDVVIATPGRLIDHLLNAHGIGLDDLEILILDEADRLLDMGFKDEINKIVESCP 365
Query: 710 KERQILLFSAT 742
RQ +LFSAT
Sbjct: 366 TNRQTMLFSAT 376
>UniRef50_Q1IMK6 Cluster: DEAD/DEAH box helicase-like; n=1;
Acidobacteria bacterium Ellin345|Rep: DEAD/DEAH box
helicase-like - Acidobacteria bacterium (strain
Ellin345)
Length = 423
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/78 (39%), Positives = 50/78 (64%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT+ R+ I I +V++ATPGR+ D M +++ + Q MLVLDEAD+++ F +
Sbjct: 133 GTSERNQIQSIRSGARVVVATPGRLEDYMGRRLVDLSQVEMLVLDEADRMMDMGFLPAIK 192
Query: 689 MVISRLPKERQILLFSAT 742
++ LP+++Q L FSAT
Sbjct: 193 RILRALPRDKQTLCFSAT 210
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/40 (57%), Positives = 31/40 (77%)
Frame = +3
Query: 93 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
P+P+QE +IP AL G+D+LA A+ GTGKT A+ IP LE +
Sbjct: 50 PTPVQEKAIPPALDGRDILATAQTGTGKTLAFIIPALEML 89
>UniRef50_Q11UP8 Cluster: ATP-dependent RNA helicase; n=1; Cytophaga
hutchinsonii ATCC 33406|Rep: ATP-dependent RNA helicase
- Cytophaga hutchinsonii (strain ATCC 33406 / NCIMB
9469)
Length = 580
Score = 70.5 bits (165), Expect = 4e-11
Identities = 28/80 (35%), Positives = 52/80 (65%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I + +++ TPGR+ID +D++ ++LDEAD++L+ F+
Sbjct: 105 YGGESIERQIRDLKAGAHIVVGTPGRIIDHLDRRTLNASHLSQIILDEADEMLNMGFRED 164
Query: 683 LDMVISRLPKERQILLFSAT 742
++++++RLP+ERQ +LFSAT
Sbjct: 165 IELILTRLPEERQTVLFSAT 184
Score = 58.0 bits (134), Expect = 2e-07
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L E++ I G+ + +PIQE +IPI ++GKD+ +A+ GTGKT A+ IP +E
Sbjct: 3 FKDLGLSPEVVEAIESIGYSEATPIQEKTIPILMTGKDLTGQAQTGTGKTAAFGIPAIEH 62
Query: 210 V 212
V
Sbjct: 63 V 63
>UniRef50_Q0RTL3 Cluster: Cold-shock DeaD box ATP-dependent RNA
helicase; n=2; Bacteria|Rep: Cold-shock DeaD box
ATP-dependent RNA helicase - Frankia alni (strain
ACN14a)
Length = 608
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + Q V V++ATPGR +D M + ++D +VLDEAD++L F
Sbjct: 163 YGGAPIGRQVRALVQGVDVVVATPGRALDHMGRGTLRLDGLHTVVLDEADEMLDMGFAED 222
Query: 683 LDMVISRLPKERQILLFSATFP 748
+D ++ + P++RQ +LFSAT P
Sbjct: 223 IDAILEQAPQKRQTVLFSATLP 244
Score = 61.3 bits (142), Expect = 2e-08
Identities = 25/61 (40%), Positives = 42/61 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L+ ELL + G+E+P+PIQ ++P ++G+D+L +A GTGKT A+ +P+L +
Sbjct: 59 FAELALRPELLRSLAALGYEEPTPIQREAVPPLVAGRDLLGQAATGTGKTAAFALPLLHR 118
Query: 210 V 212
+
Sbjct: 119 L 119
>UniRef50_Q0AVQ9 Cluster: ATP-dependent RNA helicase; n=1;
Syntrophomonas wolfei subsp. wolfei str. Goettingen|Rep:
ATP-dependent RNA helicase - Syntrophomonas wolfei
subsp. wolfei (strain Goettingen)
Length = 530
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/62 (53%), Positives = 46/62 (74%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F LK +LL I EKG+EKP+PIQ SIPIA++G D++ +A+ GTGKT ++ IP+L +
Sbjct: 6 FYSMGLKTDLLQMIDEKGFEKPTPIQVKSIPIAMAGLDLMGQAQTGTGKTASFGIPILNR 65
Query: 210 VI 215
VI
Sbjct: 66 VI 67
Score = 68.1 bits (159), Expect = 2e-10
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + + +N ++I+ TPGR++D M++ + + +VLDEAD++L F
Sbjct: 106 YGGQSIELQLRSLRRNPEIIVGTPGRLMDHMNRGTISLSPLKYVVLDEADEMLDMGFLPD 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++S+ P+ERQ LFSAT P
Sbjct: 166 IQKILSQCPRERQTFLFSATLP 187
Score = 38.3 bits (85), Expect = 0.20
Identities = 17/46 (36%), Positives = 30/46 (65%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFEM 527
K + +QAL++ PTRELA+Q ++ L++ I+V+ G Q+ E+
Sbjct: 68 KGEGLQALVLCPTRELAVQVTEEISSLSRRMRIQVLAIYGGQSIEL 113
>UniRef50_A0EA02 Cluster: Chromosome undetermined scaffold_85, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_85,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 957
Score = 70.5 bits (165), Expect = 4e-11
Identities = 30/83 (36%), Positives = 55/83 (66%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKG 679
Y N + + I + + VI+ATPGR+I+L+D+ + +++ ML+LDEAD++L F+
Sbjct: 183 YGGNPNKKQQVELIQKGIHVIVATPGRLIELIDEGMVNLNKITMLILDEADRMLDMGFEP 242
Query: 680 MLDMVISRLPKERQILLFSATFP 748
+ ++S + ++RQ +L SAT+P
Sbjct: 243 QVRDIVSTIREDRQTILLSATWP 265
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/40 (50%), Positives = 29/40 (72%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+++P+ IQ IPI LSG++ LA A+ G+GKT AY +P L
Sbjct: 79 FQQPTAIQSEVIPIVLSGRNALAIAQTGSGKTLAYLLPAL 118
>UniRef50_P32892 Cluster: ATP-dependent RNA helicase DRS1; n=13;
Saccharomycetales|Rep: ATP-dependent RNA helicase DRS1 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 752
Score = 70.5 bits (165), Expect = 4e-11
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L R +L G+ G+ KPSPIQ A+IPIAL GKD++A A G+GKT A+ IP++E+
Sbjct: 233 FNSLSLSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIER 292
Query: 210 VI 215
++
Sbjct: 293 LL 294
Score = 63.7 bits (148), Expect = 5e-09
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGML 685
G NLR + ++IATPGR ID + + +D +LV+DEAD++L + F+ L
Sbjct: 340 GLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDEL 399
Query: 686 DMVISRLPKERQILLFSAT 742
+ ++ LP RQ LLFSAT
Sbjct: 400 NEIMGLLPSNRQNLLFSAT 418
>UniRef50_Q8SRB2 Cluster: ATP-dependent RNA helicase DBP2; n=103;
Eukaryota|Rep: ATP-dependent RNA helicase DBP2 -
Encephalitozoon cuniculi
Length = 495
Score = 70.5 bits (165), Expect = 4e-11
Identities = 33/82 (40%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + I +++ +V+IATPGR+IDL D+ A + + LVLDEAD++L F+
Sbjct: 195 YGGASSQPQIRALHEGAEVVIATPGRLIDLHDQGHAPLSRVTFLVLDEADRMLDMGFEPQ 254
Query: 683 LDMVISRLPKERQILLFSATFP 748
L +I + RQ L++SAT+P
Sbjct: 255 LRKIIPKTNANRQTLMWSATWP 276
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/59 (38%), Positives = 39/59 (66%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+FEE E++ + EKG+ +P+ IQ P+ALSG+D++ A+ G+GKT ++ +P L
Sbjct: 88 KFEEAGFSSEVVSSLVEKGFSEPTAIQGQGWPMALSGRDMVGIAQTGSGKTLSFILPAL 146
>UniRef50_Q4AEL1 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=1; Chlorobium phaeobacteroides
BS1|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium phaeobacteroides BS1
Length = 356
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + D I ++ + V++ATPGR+IDL+++ V +D + LVLDEAD++++ FK
Sbjct: 5 YGGAPIDDQIQKLKRATHVVVATPGRLIDLLNRGVLSLDDLKYLVLDEADEMINMGFKAE 64
Query: 683 LDMVISRLPKERQILLFSATFP 748
+D ++ LLF+AT P
Sbjct: 65 IDEILKSCKPAITKLLFTATMP 86
>UniRef50_A4M6V6 Cluster: DEAD/DEAH box helicase domain protein;
n=2; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Petrotoga mobilis SJ95
Length = 530
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/82 (36%), Positives = 55/82 (67%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + I + + V +++ TPGR+ID +++ + + + LV+DEAD++L F
Sbjct: 106 YGGVSIGNQIRALKRRVDLVVGTPGRIIDHLNRGTLDITKIKYLVIDEADEMLDMGFIED 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
++M++S+ KE+QIL+FSAT P
Sbjct: 166 VEMILSKTNKEKQILMFSATMP 187
Score = 62.1 bits (144), Expect = 1e-08
Identities = 29/63 (46%), Positives = 45/63 (71%), Gaps = 1/63 (1%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVL 203
+F++ L +L I KG+E P+PIQE IP+ LSGK +V+ +A+ GTGKT A+ IP++
Sbjct: 3 KFQQMGLSDNILSAIDRKGYEAPTPIQEKVIPLLLSGKNNVIGQAQTGTGKTAAFGIPLI 62
Query: 204 EQV 212
E++
Sbjct: 63 ERL 65
>UniRef50_Q95XM9 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 763
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 189 CIPVLEQVI 215
+P+LE++I
Sbjct: 203 VLPILERMI 211
Score = 48.4 bits (110), Expect = 2e-04
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +2
Query: 548 NVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQIL 727
N++V TP +++ K+ ++LVLDEAD++L + F+ ++ +I + RQ L
Sbjct: 294 NIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTL 353
Query: 728 LFSAT 742
LFSAT
Sbjct: 354 LFSAT 358
>UniRef50_A0D232 Cluster: Chromosome undetermined scaffold_35, whole
genome shotgun sequence; n=5; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_35,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 434
Score = 70.1 bits (164), Expect = 5e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT+ ++ + Q V +IIATPGR+ID+M + R+LV+DEAD++L Q F
Sbjct: 161 GTSTQETREKCKQGVHIIIATPGRLIDMMKNKYLDATFMRLLVVDEADQMLDQGFSDNFA 220
Query: 689 MVISRLPKERQILLFSATFP 748
++ +P + QI LFSATFP
Sbjct: 221 EILKMVPGDIQIALFSATFP 240
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/61 (49%), Positives = 45/61 (73%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE+ L ++LL GIF G+E+PS IQ+ +I + GKDVLA+A++GTGKTG + I L++
Sbjct: 58 FEDLTLSKDLLRGIFSYGFERPSAIQQKAIKPIILGKDVLAQAQSGTGKTGTFTIGALQR 117
Query: 210 V 212
+
Sbjct: 118 I 118
>UniRef50_A0C369 Cluster: Chromosome undetermined scaffold_146,
whole genome shotgun sequence; n=2; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_146,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 566
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ + I V ++I TPGR+ D+++K+ MD CR +VLDEAD++L Q F+ +
Sbjct: 236 GMDMSSQLQSIRNGVHIVIGTPGRISDMVNKKKINMDLCRFIVLDEADRMLDQVFELEIR 295
Query: 689 MVISRLPKERQILLFSATFP 748
++ RQ +LFSAT P
Sbjct: 296 NILEHFTGPRQTMLFSATLP 315
Score = 43.6 bits (98), Expect = 0.005
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ + +L + + +KP+PIQ +P L G+D++ A +G GKT + +P L Q
Sbjct: 119 FQDLRVDHRILKILSKMKIKKPTPIQMQGLPAVLMGRDIIGVAPSGQGKTLVFLLPALLQ 178
Query: 210 VI 215
I
Sbjct: 179 CI 180
>UniRef50_Q978T9 Cluster: ATP-dependent RNA helicase; n=3;
Thermoplasma|Rep: ATP-dependent RNA helicase -
Thermoplasma volcanium
Length = 373
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I I + +I+ TPGR +DL+D+ + D+ VLDEAD++L F
Sbjct: 104 YGGVSINKQIELILRGANIIVGTPGRTLDLIDRGILNFDKVSYFVLDEADEMLDMGFIED 163
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ +I+ LP ERQ LFSAT P
Sbjct: 164 IKKIINVLPVERQSFLFSATIP 185
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/58 (48%), Positives = 42/58 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
FEEF L+ EL+ I G+ +P+ +Q +IPIAL+G D++ R+K G+GKT AY IP++
Sbjct: 4 FEEFNLRNELIESIRGTGYSEPTEVQSMAIPIALAGSDLVVRSKTGSGKTAAYLIPII 61
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/40 (45%), Positives = 28/40 (70%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
K+ I+ALI++PTRELA+Q +++ L K + IR +V G
Sbjct: 66 KEKGIRALILLPTRELAVQVAKVSEALGKRSGIRTVVVYG 105
>UniRef50_A5E2I8 Cluster: ATP-dependent rRNA helicase SPB4; n=3;
Saccharomycetales|Rep: ATP-dependent rRNA helicase SPB4
- Lodderomyces elongisporus (Yeast) (Saccharomyces
elongisporus)
Length = 637
Score = 70.1 bits (164), Expect = 5e-11
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 1/77 (1%)
Frame = +2
Query: 515 NLRDDIMRIYQN-VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDM 691
N+R+D+ +N Q++IATPGR++D M Q+ K +++LDEADKLL F+ +
Sbjct: 141 NVREDLDSYQENRPQILIATPGRLLDFMSLQIVKTSSLEIVILDEADKLLDMSFETDVIK 200
Query: 692 VISRLPKERQILLFSAT 742
++ LPK+R+ LFSAT
Sbjct: 201 ILKMLPKQRRTGLFSAT 217
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/39 (46%), Positives = 28/39 (71%)
Frame = +3
Query: 96 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+P+Q ++IP+ KDV+ A G+GKT A+ IPVL++V
Sbjct: 34 TPVQASTIPLLSGNKDVIVEAVTGSGKTLAFAIPVLQKV 72
>UniRef50_Q9LUW5 Cluster: DEAD-box ATP-dependent RNA helicase 53;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 53 - Arabidopsis thaliana (Mouse-ear cress)
Length = 616
Score = 70.1 bits (164), Expect = 5e-11
Identities = 30/82 (36%), Positives = 53/82 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT + + ++ V V + TPGR+IDLM + + + + +VLDEAD++L F
Sbjct: 211 YGGTPIGQQMRQLDYGVDVAVGTPGRVIDLMKRGALNLSEVQFVVLDEADQMLQVGFAED 270
Query: 683 LDMVISRLPKERQILLFSATFP 748
+++++ +LP++RQ ++FSAT P
Sbjct: 271 VEIILEKLPEKRQSMMFSATMP 292
Score = 57.2 bits (132), Expect = 4e-07
Identities = 26/67 (38%), Positives = 43/67 (64%)
Frame = +3
Query: 21 GNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 200
G E + E++ + KG EK PIQ+A + A+ G+D++ RA+ GTGKT A+ IP+
Sbjct: 103 GLAISELGISPEIVKALSSKGIEKLFPIQKAVLEPAMEGRDMIGRARTGTGKTLAFGIPI 162
Query: 201 LEQVICY 221
++++I Y
Sbjct: 163 IDKIIKY 169
>UniRef50_Q9LU46 Cluster: DEAD-box ATP-dependent RNA helicase 35;
n=2; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 35 - Arabidopsis thaliana (Mouse-ear cress)
Length = 591
Score = 70.1 bits (164), Expect = 5e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++R + + + V +++ATPGR+ D++ K+ +D CR L LDEAD+L+ F+ +
Sbjct: 265 GIDMRSQLEVVKRGVHIVVATPGRLKDMLAKKKMSLDACRYLTLDEADRLVDLGFEDDIR 324
Query: 689 MVISRLPKERQILLFSATFP 748
V +RQ LLFSAT P
Sbjct: 325 EVFDHFKSQRQTLLFSATMP 344
Score = 46.4 bits (105), Expect = 7e-04
Identities = 20/58 (34%), Positives = 37/58 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
F++ R +L + EKG +P+PIQ +P+ L+G+D++ A G+GKT + +P++
Sbjct: 148 FKDMKFPRPVLDTLKEKGIVQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMI 205
>UniRef50_Q0E3X4 Cluster: DEAD-box ATP-dependent RNA helicase 35A;
n=50; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
35A - Oryza sativa subsp. japonica (Rice)
Length = 627
Score = 70.1 bits (164), Expect = 5e-11
Identities = 32/80 (40%), Positives = 49/80 (61%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++R + + + V +++ATPGR+ DL+ K+ +D CR L LDEAD+L+ F+ +
Sbjct: 301 GVDMRAQLDVVKKGVHIVVATPGRLKDLLAKKKMNLDNCRYLTLDEADRLVDLGFEDDIR 360
Query: 689 MVISRLPKERQILLFSATFP 748
V +RQ LLFSAT P
Sbjct: 361 EVFDHFKAQRQTLLFSATMP 380
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/59 (35%), Positives = 37/59 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+F + L +L + EKG +P+PIQ +P+ LSG+D++ A G+GKT + +P++
Sbjct: 183 DFRDLRLPEPMLRKLREKGIVQPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPLI 241
>UniRef50_UPI00015B4D1B Cluster: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase; n=1; Nasonia
vitripennis|Rep: PREDICTED: similar to DEAD box
ATP-dependent RNA helicase - Nasonia vitripennis
Length = 594
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + + I + V +++ATPGR++D++DK++ K+ CR L +DEAD+++ F+ +
Sbjct: 298 GVPVSESLDVISRGVHIMVATPGRLMDMLDKKMVKLGVCRYLCMDEADRMIDMGFEEDVR 357
Query: 689 MVISRLPKERQILLFSATFP 748
+ S +RQ LLFSAT P
Sbjct: 358 TIFSFFEGQRQTLLFSATMP 377
Score = 54.0 bits (124), Expect = 4e-06
Identities = 23/58 (39%), Positives = 38/58 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
F+E + +L+G+ +KG KP+PIQ IP LSG+D++ A G+GKT + +P++
Sbjct: 181 FKEMKFHKGILLGLEQKGITKPTPIQVQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLI 238
>UniRef50_Q89UH0 Cluster: Dead-box ATP-dependent RNA helicase; n=23;
Alphaproteobacteria|Rep: Dead-box ATP-dependent RNA
helicase - Bradyrhizobium japonicum
Length = 530
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/80 (38%), Positives = 49/80 (61%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + + Q V+V++ATPGR++DL+ K+ LVLDEAD++L F +
Sbjct: 126 GVPMGRQVRSLMQGVEVLVATPGRLLDLVQSNGLKLGSVEFLVLDEADRMLDMGFINDIR 185
Query: 689 MVISRLPKERQILLFSATFP 748
++++LP +RQ L FSAT P
Sbjct: 186 KIVAKLPIKRQTLFFSATMP 205
Score = 58.0 bits (134), Expect = 2e-07
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F L + + E+ + P+PIQ +IP AL+G+DV+ A+ GTGKT ++ +P+L +
Sbjct: 18 FQDFGLAEPIARALSEENYVTPTPIQAQTIPTALTGRDVVGIAQTGTGKTASFALPILHR 77
Query: 210 VI 215
++
Sbjct: 78 LL 79
>UniRef50_Q15T34 Cluster: DEAD/DEAH box helicase-like; n=1;
Pseudoalteromonas atlantica T6c|Rep: DEAD/DEAH box
helicase-like - Pseudoalteromonas atlantica (strain T6c
/ BAA-1087)
Length = 458
Score = 69.7 bits (163), Expect = 7e-11
Identities = 33/81 (40%), Positives = 50/81 (61%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I ++ + V V+IATPGR++DL +++ + +LV DEAD++L F
Sbjct: 108 YGGVRIEPQIAQLQEGVDVLIATPGRLLDLYEQRALHFENLEILVFDEADRMLDLGFIDD 167
Query: 683 LDMVISRLPKERQILLFSATF 745
+ + S LP +RQ LLFSATF
Sbjct: 168 VKRIQSLLPVKRQTLLFSATF 188
Score = 52.0 bits (119), Expect = 2e-05
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE L+ EL+ I +G+ + IQ +IP+ L+ D+LA A+ GTGKT A+ +P+L++
Sbjct: 3 FEALGLRDELIHAIATQGYSVATDIQREAIPLVLAQHDLLAVAQTGTGKTAAFTLPLLQR 62
Query: 210 V 212
+
Sbjct: 63 L 63
>UniRef50_A6DK15 Cluster: ATP-dependent RNA helicase, specific for
23S rRNA; n=1; Lentisphaera araneosa HTCC2155|Rep:
ATP-dependent RNA helicase, specific for 23S rRNA -
Lentisphaera araneosa HTCC2155
Length = 462
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G R + + +++ TPGR++ ++K +D R LVLDEAD++L F+ +D
Sbjct: 110 GMPFRPQMKSVAHGAHIVVGTPGRILKHLNKSSLSLDHVRTLVLDEADRMLDMGFQDEID 169
Query: 689 MVISRLPKERQILLFSATFP 748
+I + K+RQ LLFSAT+P
Sbjct: 170 AIIDQTNKQRQTLLFSATYP 189
Score = 57.2 bits (132), Expect = 4e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F L +L+ + G+E+ + IQE S+P L GKD++A+AK GTGKT A+ + VL
Sbjct: 5 DFASLPLSEDLIKNVASLGYEEMTEIQELSLPAILDGKDLIAQAKTGTGKTAAFGLGVLS 64
Query: 207 QVI 215
+++
Sbjct: 65 KLV 67
>UniRef50_A5CVQ6 Cluster: ATP-dependent RNA helicase DeaD; n=2;
sulfur-oxidizing symbionts|Rep: ATP-dependent RNA
helicase DeaD - Vesicomyosocius okutanii subsp.
Calyptogena okutanii (strain HA)
Length = 608
Score = 69.7 bits (163), Expect = 7e-11
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + + V I+ TPGR++D ++K+ K+D + VLDEAD++L F
Sbjct: 116 YGGQSYDIQLRPLKRGVHAIVGTPGRVMDHIEKKTLKLDNLKSFVLDEADEMLKMGFIDD 175
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ R+P++RQI LFSAT P
Sbjct: 176 IKWIMQRIPEQRQIALFSATMP 197
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/63 (39%), Positives = 41/63 (65%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
++FE L +L + G+E PSPIQE I L+ KD++ +A+ GTGKT A+ +P+L
Sbjct: 12 SKFERLGLSNTILNVLDSIGYETPSPIQEQCITHLLNNKDIIGQAQTGTGKTAAFVLPLL 71
Query: 204 EQV 212
+++
Sbjct: 72 DKI 74
>UniRef50_Q9N478 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 732
Score = 69.7 bits (163), Expect = 7e-11
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
G H SC G+++ + RI + +I+ TPGR++ MD+ D ++LVLDE
Sbjct: 172 GAHHGFSCGLVIGGSDVAFERNRI-SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDE 230
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F L+ +I+ LP ERQ LLFSAT
Sbjct: 231 ADRMLDMGFSKQLNSIINNLPAERQTLLFSAT 262
Score = 53.6 bits (123), Expect = 5e-06
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
FE+F L L G+ + + KP+ IQ +I +L+G DV+ AK G+GKT A IPVLE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLE 136
>UniRef50_Q7QDB7 Cluster: ENSANGP00000017541; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000017541 - Anopheles gambiae
str. PEST
Length = 771
Score = 69.7 bits (163), Expect = 7e-11
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G N +D + + + +I+ATPGR+ D++ + +D R LVLDEAD++L F+
Sbjct: 418 YGGNNTQDQMRDLERGCHLIVATPGRLEDMIGRGKVGLDNIRFLVLDEADRMLDMGFEPQ 477
Query: 683 LDMVI--SRLP--KERQILLFSATFP 748
+ ++ SR+P ERQ L+FSATFP
Sbjct: 478 IRRIVEESRMPVTGERQTLMFSATFP 503
>UniRef50_A0RUV7 Cluster: Superfamily II helicase; n=3;
Thermoprotei|Rep: Superfamily II helicase - Cenarchaeum
symbiosum
Length = 434
Score = 69.7 bits (163), Expect = 7e-11
Identities = 30/62 (48%), Positives = 47/62 (75%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+FEE +K+ +L + + G+EK PIQEA+IP+ L+G+DV+ +A GTGKTGAY I +L+
Sbjct: 3 KFEELGIKQNVLDALRDMGFEKAFPIQEAAIPVLLTGRDVVGQAHTGTGKTGAYSISMLQ 62
Query: 207 QV 212
++
Sbjct: 63 EI 64
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + + + ++++ATPGR+ID + + +D+ LVLDEAD +L F
Sbjct: 104 YGGQSMGVQLDALKRGAEILVATPGRLIDHIKRGSISIDRVTHLVLDEADTMLDMGFIDD 163
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ P E+ + LFSAT P
Sbjct: 164 IQFILDLTPDEKVMSLFSATMP 185
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/39 (46%), Positives = 26/39 (66%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQT 518
IQ LIV PTRELA+Q ++ + AK+T +R + G Q+
Sbjct: 70 IQGLIVAPTRELAVQITEEVKKFAKYTKVRPVAIYGGQS 108
>UniRef50_Q9KAA6 Cluster: ATP-dependent RNA helicase; n=5;
Firmicutes|Rep: ATP-dependent RNA helicase - Bacillus
halodurans
Length = 539
Score = 69.3 bits (162), Expect = 9e-11
Identities = 32/82 (39%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I + Q VQV+I TPGR+ID + ++ +D ++LDEAD++L F
Sbjct: 108 YGGQSIVHQIKALKQGVQVVIGTPGRIIDHLRRKTLILDHVNTVILDEADEMLDMGFIDD 167
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ ++ ERQ LLFSAT P
Sbjct: 168 IESILRQVKNERQTLLFSATMP 189
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/62 (48%), Positives = 43/62 (69%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E + E+ I E G+E+PSPIQ +IP L+G DV+ +A+ GTGKT A+ IPV+E
Sbjct: 7 KFNELQIGEEIKKAIIEMGFEEPSPIQAKAIPAILAGGDVIGQAQTGTGKTAAFGIPVVE 66
Query: 207 QV 212
+V
Sbjct: 67 KV 68
Score = 39.5 bits (88), Expect = 0.086
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQT 518
+QALI+ PTRELA+Q S +L+KH IR + G Q+
Sbjct: 74 VQALILTPTRELAIQVSGEIQKLSKHKKIRTLPIYGGQS 112
>UniRef50_Q8EZ11 Cluster: ATP-dependent RNA helicase; n=4;
Leptospira|Rep: ATP-dependent RNA helicase - Leptospira
interrogans
Length = 521
Score = 69.3 bits (162), Expect = 9e-11
Identities = 29/80 (36%), Positives = 52/80 (65%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + +N Q++IATPGRM+D M + +D+ +++VLDEAD++L F+
Sbjct: 113 YGGQEIERQLRALRKNPQIVIATPGRMMDHMRRGSIHLDEIKIVVLDEADEMLDMGFRED 172
Query: 683 LDMVISRLPKERQILLFSAT 742
++ ++ P +RQ ++FSAT
Sbjct: 173 MEFILKDTPADRQTIMFSAT 192
Score = 64.9 bits (151), Expect = 2e-09
Identities = 28/60 (46%), Positives = 39/60 (65%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L E+ I E G+E+ SPIQ +IP+ L GKD++ A+ GTGKT A+ IP +E
Sbjct: 10 KFSELNLSAEIQNAILEMGFEEASPIQSEAIPVILKGKDIIGHAQTGTGKTAAFAIPTIE 69
>UniRef50_Q82T78 Cluster: RhlE; ATP-dependent RNA helicase RhlE;
n=3; Nitrosomonadaceae|Rep: RhlE; ATP-dependent RNA
helicase RhlE - Nitrosomonas europaea
Length = 498
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/81 (37%), Positives = 52/81 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G N+ I + V++++ATPGR++DL++++ + +LVLDEAD++L F
Sbjct: 116 FGGINIEPQIAALQAGVEILVATPGRLLDLVEQKAVNFSKTEILVLDEADRMLDMGFLPD 175
Query: 683 LDMVISRLPKERQILLFSATF 745
+ V++ L +RQ L+FSATF
Sbjct: 176 IKRVMALLSPQRQSLMFSATF 196
Score = 58.8 bits (136), Expect = 1e-07
Identities = 26/64 (40%), Positives = 41/64 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L E+L + ++G+ P+PIQ IP L+GKDV+A A+ GTGKT + +P+L +
Sbjct: 7 FAQLGLSSEILHAVNDEGYVNPTPIQAQVIPSILAGKDVMASAQTGTGKTAGFTLPLLYR 66
Query: 210 VICY 221
+ Y
Sbjct: 67 LQAY 70
Score = 35.9 bits (79), Expect = 1.1
Identities = 17/48 (35%), Positives = 26/48 (54%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
V P + ++ALI+ PTRELA+Q + + K+ +R V G E
Sbjct: 75 VSPARHPVRALIMAPTRELAMQIDESVRKYGKYLALRTAVVFGGINIE 122
>UniRef50_Q6F0U0 Cluster: ATP-dependent RNA helicase; n=1;
Mesoplasma florum|Rep: ATP-dependent RNA helicase -
Mesoplasma florum (Acholeplasma florum)
Length = 666
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++RD I R+ ++ Q+++ TPGR+ D ++++ K+D R ++LDEAD++L FK +D
Sbjct: 107 GADMRDQIKRL-KDSQIVVGTPGRVNDHLNRKTLKLDDVRTIILDEADEMLKMGFKNEID 165
Query: 689 MVISRLPKERQILLFSAT 742
+ R+ + QI LFSAT
Sbjct: 166 ALFERVSPDVQIGLFSAT 183
Score = 50.0 bits (114), Expect = 6e-05
Identities = 19/61 (31%), Positives = 40/61 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+E L ++L+ + + + + + IQ +IP+ L GK++ ++ GTGKT ++ +P+LE+
Sbjct: 3 FKELQLSDKVLVALEKANFNEATEIQARAIPLFLEGKNIFGKSSTGTGKTASFVLPILEK 62
Query: 210 V 212
+
Sbjct: 63 I 63
>UniRef50_Q2BMZ1 Cluster: ATP-dependent RNA helicase; n=1;
Neptuniibacter caesariensis|Rep: ATP-dependent RNA
helicase - Neptuniibacter caesariensis
Length = 417
Score = 69.3 bits (162), Expect = 9e-11
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + + +++ATPGR++DLM K + + LVLDEAD++L F
Sbjct: 110 YGGAAINPQMQSLSKGCDIVVATPGRLLDLMRKNALDLRGLKALVLDEADRMLDLGFADE 169
Query: 683 LDMVISRLPKERQILLFSATFP 748
LD ++ + P Q LLFSATFP
Sbjct: 170 LDDILDQTPGNVQTLLFSATFP 191
Score = 48.4 bits (110), Expect = 2e-04
Identities = 18/44 (40%), Positives = 33/44 (75%)
Frame = +3
Query: 81 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
G+++P+ IQ+ +IP L G D++A A+ G+GKT + +P+LE++
Sbjct: 20 GYKEPTAIQDKAIPAVLKGHDLIAAAETGSGKTAGFVLPLLEKL 63
>UniRef50_Q01PH0 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Solibacter usitatus Ellin6076|Rep: DEAD/DEAH box
helicase domain protein - Solibacter usitatus (strain
Ellin6076)
Length = 422
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/78 (39%), Positives = 47/78 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N R + I +++ATPGR+ D M + + + RML+LDE+D++L F +
Sbjct: 109 GLNERSQLRDIRGGANIVVATPGRLYDFMSRGLINLTTVRMLILDESDRMLDMGFLPTIK 168
Query: 689 MVISRLPKERQILLFSAT 742
+I+ +P ERQ LLFSAT
Sbjct: 169 RIIAAMPAERQTLLFSAT 186
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/59 (38%), Positives = 38/59 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F E L +L + + + +P+PIQ +I AL+GKD++A A+ GTGKT A+ +P ++
Sbjct: 4 FSELPLSAQLKSNLAKNNFTEPTPIQSLAIEPALAGKDIVATAQTGTGKTLAFLLPTIQ 62
Score = 44.0 bits (99), Expect = 0.004
Identities = 19/47 (40%), Positives = 32/47 (68%)
Frame = +3
Query: 369 ELF*VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+L +P++ ++ALI+ PTRELALQ ++ +++A+ T IR V G
Sbjct: 62 QLLSTEPRQPGVRALILTPTRELALQINEALLQIARGTGIRAAVAVG 108
>UniRef50_A6CFZ8 Cluster: ATP-dependent RNA helicase; n=1;
Planctomyces maris DSM 8797|Rep: ATP-dependent RNA
helicase - Planctomyces maris DSM 8797
Length = 445
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/80 (38%), Positives = 51/80 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + + +++ATPGR++DLM++ K++Q + VLDEAD++L F
Sbjct: 110 YGGVGQGNQVKALKRGAHILVATPGRLLDLMNQGHIKLNQLEVFVLDEADRMLDMGFLPD 169
Query: 683 LDMVISRLPKERQILLFSAT 742
L +I++LP +RQ L FSAT
Sbjct: 170 LKRIITQLPTQRQSLFFSAT 189
Score = 58.8 bits (136), Expect = 1e-07
Identities = 27/63 (42%), Positives = 40/63 (63%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N F+E L + + E+ ++ P+PIQ +IP AL G+DVL A+ GTGKT A +P+L
Sbjct: 2 NTFQELKLIAPVQKALVEENYKIPTPIQAQTIPAALEGRDVLGCAQTGTGKTAALALPIL 61
Query: 204 EQV 212
Q+
Sbjct: 62 NQL 64
>UniRef50_Q61JF4 Cluster: Putative uncharacterized protein CBG09816;
n=1; Caenorhabditis briggsae|Rep: Putative
uncharacterized protein CBG09816 - Caenorhabditis
briggsae
Length = 628
Score = 69.3 bits (162), Expect = 9e-11
Identities = 33/82 (40%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N +D I ++ ++IATPGR++D+M++ + ++ CR LVLDEAD++L F+ + V
Sbjct: 283 NYKDQIHKLRLGCHILIATPGRLLDVMEQGLIGLEGCRYLVLDEADRMLDMGFEPQIRQV 342
Query: 695 I--SRLP--KERQILLFSATFP 748
+ +R+P +ER +FSATFP
Sbjct: 343 VEFNRMPPKEERVTAMFSATFP 364
>UniRef50_Q17JB5 Cluster: DEAD box ATP-dependent RNA helicase; n=4;
Eukaryota|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 699
Score = 69.3 bits (162), Expect = 9e-11
Identities = 29/84 (34%), Positives = 56/84 (66%)
Frame = +2
Query: 497 GYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
G +G +RD + + +++IATPGR+ID +++ + + +C LVLDEAD++L F+
Sbjct: 232 GAPKGPQIRD----LERGAEIVIATPGRLIDFLERGITNLRRCTYLVLDEADRMLDMGFE 287
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
+ ++ ++ +RQ+L++SAT+P
Sbjct: 288 PQIRKIMGQIRPDRQVLMWSATWP 311
Score = 52.0 bits (119), Expect = 2e-05
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
EFE+ L +L ++G+ KP+ IQ +PIALSG+D++ A+ G+GKT AY P L
Sbjct: 123 EFEQGGLPDYILEEANKQGFSKPTAIQAQGMPIALSGRDMVGIAQTGSGKTLAYIAPALV 182
Query: 207 QV 212
+
Sbjct: 183 HI 184
>UniRef50_A0C015 Cluster: Chromosome undetermined scaffold_14, whole
genome shotgun sequence; n=3; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_14,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 532
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + R M + ++ +++ATPGR+ID +D QV + LVLDEAD++L F+
Sbjct: 176 YGGADKRPQEMALARDPDIVVATPGRLIDFLDAQVTNLHNVTYLVLDEADRMLDMGFEQQ 235
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ + S + ++RQ + FSAT+P
Sbjct: 236 VRKIDSYIREDRQTVFFSATWP 257
Score = 46.4 bits (105), Expect = 7e-04
Identities = 22/62 (35%), Positives = 37/62 (59%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
E+++ +L I K + +P+PIQ + PI +SG D++ A+ G+GKT AY +P L
Sbjct: 72 EWKDCQFPNQLNKRISLKAYNRPTPIQASVFPIIMSGHDLIGIAQTGSGKTIAYLLPGLV 131
Query: 207 QV 212
+
Sbjct: 132 HI 133
>UniRef50_A6QYH1 Cluster: 2-isopropylmalate synthase; n=4;
Ascomycota|Rep: 2-isopropylmalate synthase - Ajellomyces
capsulatus NAm1
Length = 1466
Score = 69.3 bits (162), Expect = 9e-11
Identities = 30/62 (48%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ F L R +L G+ G+ P+PIQ +IP+AL GKDV+ A G+GKTGA+ IP+LE+
Sbjct: 307 FQAFSLSRPILRGLTSVGFTTPTPIQRKTIPVALLGKDVVGGAVTGSGKTGAFIIPILER 366
Query: 210 VI 215
++
Sbjct: 367 LL 368
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGML 685
G +LR+ + + VIIATPGR ID M + +D +LVLDEAD++L F L
Sbjct: 413 GFSLREQENILKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADEL 472
Query: 686 DMVISRLPKERQILLFSAT 742
+ +++ +PK RQ +LFSAT
Sbjct: 473 NEILTTIPKSRQTMLFSAT 491
>UniRef50_Q9FFT9 Cluster: Probable DEAD-box ATP-dependent RNA
helicase 32; n=1; Arabidopsis thaliana|Rep: Probable
DEAD-box ATP-dependent RNA helicase 32 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 739
Score = 69.3 bits (162), Expect = 9e-11
Identities = 37/92 (40%), Positives = 53/92 (57%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
GK H+ S G D + +++ PGR++ MD+ + Q ++L+LDE
Sbjct: 167 GKFHKFSAGLLIGGREGVDVEKERVHEMNILVCAPGRLLQHMDETPNFECPQLQILILDE 226
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L FKG LD +IS+LPK RQ LLFSAT
Sbjct: 227 ADRVLDSAFKGQLDPIISQLPKHRQTLLFSAT 258
Score = 47.2 bits (107), Expect = 4e-04
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + + + G+ + + + +Q A+IP AL G+D+L A+ G+GKT A+ IP+LE
Sbjct: 72 KFAQLPISDKTKRGLKDAKYVDMTDVQSAAIPHALCGRDILGAARTGSGKTLAFVIPILE 131
Query: 207 QV 212
++
Sbjct: 132 KL 133
>UniRef50_Q9P7C7 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase prp11; n=1; Schizosaccharomyces pombe|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase prp11 -
Schizosaccharomyces pombe (Fission yeast)
Length = 1014
Score = 69.3 bits (162), Expect = 9e-11
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDK---QVAKMDQCRMLVLDEADKLLSQDF 673
Y G ++D I + + ++++ TPGRMID++ +V + +C LVLDEAD++ F
Sbjct: 526 YGGAPIKDQIADLKRGAEIVVCTPGRMIDVLSANAGRVTNLHRCTYLVLDEADRMFDLGF 585
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + +I+ + +RQ +LFSATFP
Sbjct: 586 EPQVMRIINNIRPDRQTVLFSATFP 610
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/56 (39%), Positives = 34/56 (60%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L + + I G+EKP+ IQ +IP SG+DV+ AK G+GKT A+ +P+ +
Sbjct: 425 LSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFLLPMFRHI 480
>UniRef50_Q98RE0 Cluster: ATP-DEPENDENT RNA HELICASE; n=1;
Mycoplasma pulmonis|Rep: ATP-DEPENDENT RNA HELICASE -
Mycoplasma pulmonis
Length = 480
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/63 (46%), Positives = 43/63 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + +K E+L + E G+EKP+ IQEA +P A GKD++ +A+ GTGKT A+ IP+L
Sbjct: 3 FTQMNIKSEILKSLDEIGFEKPTKIQEAVLPFAFEGKDIIGQAQTGTGKTAAFAIPILSN 62
Query: 210 VIC 218
+ C
Sbjct: 63 LDC 65
Score = 56.8 bits (131), Expect = 5e-07
Identities = 25/65 (38%), Positives = 41/65 (63%)
Frame = +2
Query: 551 VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILL 730
V +++ATPGR+ DL+ + + + LDEAD+LL F + ++++LPK+RQ
Sbjct: 120 VNIVVATPGRLEDLLAQNKIDLSHIKTFTLDEADELLKIGFYNEIIKIMNKLPKKRQNFF 179
Query: 731 FSATF 745
F+ATF
Sbjct: 180 FTATF 184
>UniRef50_Q6D2K3 Cluster: ATP-independent RNA helicase; n=6;
Proteobacteria|Rep: ATP-independent RNA helicase -
Erwinia carotovora subsp. atroseptica (Pectobacterium
atrosepticum)
Length = 460
Score = 68.9 bits (161), Expect = 1e-10
Identities = 31/64 (48%), Positives = 44/64 (68%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
+++ TPGR+ D + KQ +D ++LVLDEAD++L F +D VIS P +RQ LLFS
Sbjct: 126 IVVGTPGRIQDHLRKQSLALDSLKVLVLDEADRMLDMGFTDAIDDVISYTPSDRQTLLFS 185
Query: 737 ATFP 748
AT+P
Sbjct: 186 ATYP 189
Score = 56.0 bits (129), Expect = 9e-07
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L E L + E G+ + +P+Q A++P LSG DV A+AK G+GKT A+ I +L++
Sbjct: 6 FSSLALPAEQLSNLNELGYTEMTPVQAATLPAVLSGADVRAKAKTGSGKTAAFGIGLLDR 65
Query: 210 VI 215
++
Sbjct: 66 IV 67
>UniRef50_A7HKQ8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Fervidobacterium nodosum Rt17-B1|Rep: DEAD/DEAH box
helicase domain protein - Fervidobacterium nodosum
Rt17-B1
Length = 571
Score = 68.9 bits (161), Expect = 1e-10
Identities = 34/69 (49%), Positives = 52/69 (75%), Gaps = 2/69 (2%)
Frame = +3
Query: 12 DTRGNE-FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGA 185
+T+ E FE+F L E+L+ I +KG+EKP+ IQ+ +P ALS KD++A+A+ GTGKT A
Sbjct: 13 ETKNYERFEDFGLSEEILLAIQKKGYEKPTEIQKIVLPYALSTDKDLIAQAQTGTGKTAA 72
Query: 186 YCIPVLEQV 212
+ IP+LE++
Sbjct: 73 FGIPLLERI 81
Score = 59.7 bits (138), Expect = 8e-08
Identities = 29/91 (31%), Positives = 47/91 (51%)
Frame = +2
Query: 476 THRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADK 655
T R Y G +L + + V +++ TPGR+ID +++ + LVLDEAD+
Sbjct: 114 TKRVKITTLYGGQSLEKQFKDLEKGVDIVVGTPGRIIDHLNRDTLDLSHVEYLVLDEADR 173
Query: 656 LLSQDFKGMLDMVISRLPKERQILLFSATFP 748
+L F + +I R + ++ LFSAT P
Sbjct: 174 MLDMGFLDDVLEIIKRTGENKRTFLFSATMP 204
>UniRef50_A6DL95 Cluster: Probable ATP-dependent RNA helicase; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable
ATP-dependent RNA helicase - Lentisphaera araneosa
HTCC2155
Length = 482
Score = 68.9 bits (161), Expect = 1e-10
Identities = 29/62 (46%), Positives = 43/62 (69%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F++ LK+ +L I+ G++KP+PIQ S+ I L G+D L RAK GTGKT A+ IP L+
Sbjct: 6 QFQDLGLKKTILSAIYTAGYKKPTPIQNKSLKIILQGQDALVRAKTGTGKTAAFAIPALQ 65
Query: 207 QV 212
+
Sbjct: 66 HL 67
Score = 58.8 bits (136), Expect = 1e-07
Identities = 28/72 (38%), Positives = 43/72 (59%)
Frame = +2
Query: 530 IMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLP 709
+ + QVI ATPGR+ID+ ++ + + MLV+DEAD+L F+ + ++ LP
Sbjct: 117 VKKSLHGAQVISATPGRLIDIKEQGLLNSNCINMLVIDEADRLFDMGFREAVTSILKDLP 176
Query: 710 KERQILLFSATF 745
K Q +L SATF
Sbjct: 177 KSVQTVLCSATF 188
>UniRef50_A0Z0M4 Cluster: ATP-dependent RNA helicase; n=1; marine
gamma proteobacterium HTCC2080|Rep: ATP-dependent RNA
helicase - marine gamma proteobacterium HTCC2080
Length = 582
Score = 68.9 bits (161), Expect = 1e-10
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G ++R + + + +++ATPGR++D ++++ + +VLDEAD++L F
Sbjct: 113 FGGADMRQQLKSLREGTHIVVATPGRLLDHIERRSIDLTGINAVVLDEADEMLRMGFIDD 172
Query: 683 LDMVISRLPKERQILLFSATFP 748
+D ++++ PKER++ LFSAT P
Sbjct: 173 VDTILAKTPKERKVALFSATMP 194
Score = 55.2 bits (127), Expect = 2e-06
Identities = 25/67 (37%), Positives = 39/67 (58%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
DT+ + F L L + G+E +PIQ +IP+ L G+DV+ A+ GTGKT A+
Sbjct: 5 DTQPSRFNSLGLPDFLQENLQSLGYETATPIQAGTIPLLLEGRDVVGLAQTGTGKTAAFA 64
Query: 192 IPVLEQV 212
+P+L +
Sbjct: 65 LPILANI 71
>UniRef50_Q4SDX4 Cluster: Chromosome undetermined SCAF14628, whole
genome shotgun sequence; n=2; Tetraodontidae|Rep:
Chromosome undetermined SCAF14628, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 634
Score = 68.5 bits (160), Expect = 2e-10
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
GK H S G +L+ + +I Q+ +II TPGR++ MD+ V+ +LVLDE
Sbjct: 26 GKNHDFSAGLVIGGKDLKLESEQI-QHTNIIICTPGRLLQHMDQTVSFHASNLHVLVLDE 84
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F L+ ++ LPK RQ LLFSAT
Sbjct: 85 ADRILDMGFTETLNAIVENLPKSRQTLLFSAT 116
>UniRef50_Q5FS73 Cluster: ATP-dependent RNA helicase; n=2;
Gluconobacter oxydans|Rep: ATP-dependent RNA helicase -
Gluconobacter oxydans (Gluconobacter suboxydans)
Length = 432
Score = 68.5 bits (160), Expect = 2e-10
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + + + + V +I+A PGR++DL+++ + + Q LVLDEAD++L F
Sbjct: 115 FGGVSQVHQVKALEEGVDIIVAAPGRLLDLIEQGLCDLSQLETLVLDEADQMLDMGFAKP 174
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ +++ LP++R +LFSAT P
Sbjct: 175 IERIVATLPEDRHTVLFSATMP 196
Score = 61.3 bits (142), Expect = 2e-08
Identities = 27/66 (40%), Positives = 41/66 (62%)
Frame = +3
Query: 15 TRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCI 194
T F + L LL + E G+ KP+PIQ SIP+ L G+D+L A+ GTGKT ++ +
Sbjct: 4 TSAQAFADLALAPTLLRALDEAGYVKPTPIQAQSIPLLLEGRDLLGLAQTGTGKTASFAL 63
Query: 195 PVLEQV 212
P+L ++
Sbjct: 64 PLLHRL 69
>UniRef50_Q484Q1 Cluster: RNA helicase DeaD; n=1; Colwellia
psychrerythraea 34H|Rep: RNA helicase DeaD - Colwellia
psychrerythraea (strain 34H / ATCC BAA-681)
(Vibriopsychroerythus)
Length = 611
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + ++ + QV++ TPGR++D + ++ K+D+ R+ VLDEAD++L+ F
Sbjct: 119 YGGQSYGPQFQQLERGAQVVVGTPGRLMDHLRRKSLKLDELRVCVLDEADEMLNMGFLED 178
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ +PK Q+ LFSAT P
Sbjct: 179 IQWILDHIPKTAQMCLFSATMP 200
Score = 50.0 bits (114), Expect = 6e-05
Identities = 24/61 (39%), Positives = 34/61 (55%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L LL + G+ + IQ +IP L+GKDVL A+ GTGKT A+ +P L +
Sbjct: 17 FASLGLPENLLSAVLSIGFTSATDIQALTIPPLLAGKDVLGEAQTGTGKTAAFGLPALAK 76
Query: 210 V 212
+
Sbjct: 77 I 77
>UniRef50_A2G6R5 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 865
Score = 68.5 bits (160), Expect = 2e-10
Identities = 34/82 (41%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G N R +R +I A PGR++D + K + ++V+DEADK++S DF+
Sbjct: 591 YGGENNRRQQIRDIAGADIIAAAPGRLLDFIRNNNIKPESIGIVVIDEADKMVSNDFEPQ 650
Query: 683 LDMVISRLPKERQILLFSATFP 748
VISR PK Q L+FSAT+P
Sbjct: 651 CKAVISRCPKNIQTLMFSATWP 672
Score = 58.4 bits (135), Expect = 2e-07
Identities = 25/63 (39%), Positives = 40/63 (63%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + EL + E+ W +P+PIQ+ +IPI +SG +++ A+ G+GKT AY IP +
Sbjct: 487 QFNPQMMLPELFQNVREQNWTEPTPIQKIAIPIVMSGMNLVGIAQTGSGKTAAYLIPAIT 546
Query: 207 QVI 215
VI
Sbjct: 547 YVI 549
>UniRef50_A2SQE1 Cluster: DEAD/DEAH box helicase domain protein;
n=6; cellular organisms|Rep: DEAD/DEAH box helicase
domain protein - Methanocorpusculum labreanum (strain
ATCC 43576 / DSM 4855 / Z)
Length = 656
Score = 68.5 bits (160), Expect = 2e-10
Identities = 30/61 (49%), Positives = 43/61 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F EF + ELL I + G+E+P+PIQ +IP L GKDV +A+ GTGKT A+ IP++E+
Sbjct: 7 FAEFAISEELLQAIGDMGFEEPTPIQAMAIPQILDGKDVTGQAQTGTGKTAAFGIPIIER 66
Query: 210 V 212
+
Sbjct: 67 L 67
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + VQV+I TPGR+ID + + +D M +LDEAD++L F+
Sbjct: 109 YGGQPIERQLRALKGTVQVVIGTPGRVIDHIKRGTLHLDSVTMFILDEADQMLDMGFRED 168
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ + PK+RQ +LFSAT P
Sbjct: 169 IEDIFRDTPKDRQTILFSATMP 190
Score = 37.1 bits (82), Expect = 0.46
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGAQTFE 524
+DP +QAL++ PTRELA+QT++ L K+ + V+ G Q E
Sbjct: 67 LDPDNKNVQALVLSPTRELAIQTAEEFSRLMKYKKGLNVVPIYGGQPIE 115
>UniRef50_Q8L7S8 Cluster: DEAD-box ATP-dependent RNA helicase 3;
n=13; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 3 - Arabidopsis thaliana (Mouse-ear cress)
Length = 748
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/82 (37%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + V V++ TPGR+IDL++ + K+ + LVLDEAD++L+ F+
Sbjct: 213 YGGVSYTIQQSALTRGVDVVVGTPGRIIDLIEGRSLKLGEVEYLVLDEADQMLAVGFEEA 272
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ LP +RQ +LFSAT P
Sbjct: 273 VESILENLPTKRQSMLFSATMP 294
Score = 47.2 bits (107), Expect = 4e-04
Identities = 23/56 (41%), Positives = 37/56 (66%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L + L + ++G PIQ A + AL G+D++ARAK GTGKT A+ IP+++++
Sbjct: 109 LPQRLEESLEKRGITHLFPIQRAVLVPALQGRDIIARAKTGTGKTLAFGIPIIKRL 164
>UniRef50_P0C2N8 Cluster: ATP-dependent RNA helicase drs-1; n=16;
Fungi/Metazoa group|Rep: ATP-dependent RNA helicase
drs-1 - Neurospora crassa
Length = 829
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/64 (45%), Positives = 45/64 (70%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F+E L R +L G+ G+ KP+PIQ +IPI+L GKDV+ A G+GKT A+ +P+L
Sbjct: 293 SSFQEMSLSRPILRGLTSVGFTKPTPIQAKTIPISLMGKDVVGGAVTGSGKTAAFVVPIL 352
Query: 204 EQVI 215
E+++
Sbjct: 353 ERLL 356
Score = 62.1 bits (144), Expect = 1e-08
Identities = 33/79 (41%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGML 685
G +L+ + V+IATPGR ID M + +D +LVLDEAD++L F L
Sbjct: 401 GLSLKVQEAELRLRPDVVIATPGRFIDHMRNSASFAVDTIEILVLDEADRMLEDGFADEL 460
Query: 686 DMVISRLPKERQILLFSAT 742
+ +++ LPK RQ +LFSAT
Sbjct: 461 NEILTTLPKSRQTMLFSAT 479
Score = 42.7 bits (96), Expect = 0.009
Identities = 19/48 (39%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Frame = +3
Query: 387 PKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFEM 527
PKK T + +I+ PTRELA+Q + ++LA HTDI+ + G + ++
Sbjct: 359 PKKVPTTRVVILTPTRELAIQCHAVAVKLASHTDIKFCLAVGGLSLKV 406
>UniRef50_Q96GQ7 Cluster: Probable ATP-dependent RNA helicase DDX27;
n=34; Bilateria|Rep: Probable ATP-dependent RNA helicase
DDX27 - Homo sapiens (Human)
Length = 796
Score = 68.5 bits (160), Expect = 2e-10
Identities = 31/62 (50%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L R LL I G+++P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 210 VI 215
+I
Sbjct: 280 LI 281
Score = 49.2 bits (112), Expect = 1e-04
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
++IATPGR+ID L + + +L+LDEAD++L + F+ + +I RQ +LF
Sbjct: 342 ILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEYFEEQMKEIIRMCSHHRQTMLF 401
Query: 734 SAT 742
SAT
Sbjct: 402 SAT 404
>UniRef50_Q0UZ59 Cluster: ATP-dependent RNA helicase DBP9; n=1;
Phaeosphaeria nodorum|Rep: ATP-dependent RNA helicase
DBP9 - Phaeosphaeria nodorum (Septoria nodorum)
Length = 597
Score = 68.5 bits (160), Expect = 2e-10
Identities = 29/62 (46%), Positives = 42/62 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L+ LL GI ++ W P+ +Q +IP+AL G+D+LAR+ GTGKTGAY +P+L
Sbjct: 49 FAELQLEPRLLRGIRDQKWGSPTAVQSKAIPLALQGRDILARSGTGTGKTGAYLLPILHN 108
Query: 210 VI 215
+
Sbjct: 109 TL 110
Score = 44.0 bits (99), Expect = 0.004
Identities = 22/69 (31%), Positives = 36/69 (52%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKE 715
++ N ++IATP R ++ + + LV+DE D ++ FK LD + +PK
Sbjct: 162 KLADNPDIVIATPARASANINTGALAVTELAHLVVDEGDLVMGYGFKEDLDQIAQNIPKG 221
Query: 716 RQILLFSAT 742
Q+ L SAT
Sbjct: 222 VQMFLMSAT 230
>UniRef50_A2AAP7 Cluster: DEAD (Asp-Glu-Ala-Asp) box polypeptide 48;
n=5; Fungi/Metazoa group|Rep: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 48 - Mus musculus (Mouse)
Length = 299
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
H+C G GTN+ +DI ++ V+ TPGR+ D++ ++ + +MLVLDEAD++L+
Sbjct: 117 HACIG---GTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLN 173
Query: 665 QDFKGMLDMVISRLPKERQILLFSATFP 748
+ FK + V LP Q++L SAT P
Sbjct: 174 KGFKEQIYDVYRYLPPATQVVLISATLP 201
Score = 59.3 bits (137), Expect = 1e-07
Identities = 25/59 (42%), Positives = 42/59 (71%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT + + VL+
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSVSVLQ 98
>UniRef50_A6NQG8 Cluster: Putative uncharacterized protein; n=2;
Bacteroidales|Rep: Putative uncharacterized protein -
Bacteroides capillosus ATCC 29799
Length = 636
Score = 68.1 bits (159), Expect = 2e-10
Identities = 31/61 (50%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + +L + E G+EKPSPIQE +IP AL+G+DVL A+ GTGKT A+ P+L++
Sbjct: 3 FRELGLTQSILKALAELGYEKPSPIQEKAIPPALAGRDVLGCAQTGTGKTCAFAAPILQR 62
Query: 210 V 212
+
Sbjct: 63 L 63
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/82 (32%), Positives = 47/82 (57%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + + ++ + V +++ATPGR++DL + + + + VLDEAD++L F
Sbjct: 107 FGGVGQQPQVDKLKKGVDILVATPGRLLDLQGQGFVDLSRLEIFVLDEADRMLDMGFLHD 166
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ V+ LP +Q L FSAT P
Sbjct: 167 VRRVLKLLPAVKQTLFFSATMP 188
>UniRef50_Q9N5K1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 630
Score = 68.1 bits (159), Expect = 2e-10
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + + + +++ATPGR+ D++ K++ ++ CR LVLDEAD++L F+ +
Sbjct: 309 GVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIK 368
Query: 689 MVISRLPKERQILLFSATFP 748
+ +RQ LLFSAT P
Sbjct: 369 SIFYFFKAQRQTLLFSATMP 388
Score = 42.7 bits (96), Expect = 0.009
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 75 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+KG P+ IQ IP+ALSG+D++ A G+GKT + +P++
Sbjct: 207 QKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLV 249
>UniRef50_Q8IL14 Cluster: Helicase, truncated, putative; n=3;
Eukaryota|Rep: Helicase, truncated, putative -
Plasmodium falciparum (isolate 3D7)
Length = 352
Score = 68.1 bits (159), Expect = 2e-10
Identities = 33/89 (37%), Positives = 55/89 (61%)
Frame = +2
Query: 482 RHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL 661
R++C Y G I + Q V ++IA PGR+IDL+++ V + + LVLDEADK+L
Sbjct: 216 RNTCA--YGGVPKSGQIYALKQGVHILIACPGRLIDLLEQNVTNLMRVTYLVLDEADKML 273
Query: 662 SQDFKGMLDMVISRLPKERQILLFSATFP 748
F+ + ++ ++ +RQ L++SAT+P
Sbjct: 274 DMGFELQIRKIVDQIRPDRQTLMWSATWP 302
Score = 46.0 bits (104), Expect = 0.001
Identities = 19/41 (46%), Positives = 29/41 (70%)
Frame = +3
Query: 93 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
P+PIQ PIALSGKD++ +A+ G+GKT A+ +P ++
Sbjct: 136 PTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHIL 176
>UniRef50_Q4N215 Cluster: RNA helicase, putative; n=3;
Aconoidasida|Rep: RNA helicase, putative - Theileria
parva
Length = 635
Score = 68.1 bits (159), Expect = 2e-10
Identities = 30/93 (32%), Positives = 56/93 (60%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G++ + + Y G R + + + V+++IA PGR+ID ++ V + + LVLDEA
Sbjct: 307 GRSSKLKTSVAYGGVPKRFQTIALRRGVEILIACPGRLIDFLESSVTNLRRVTYLVLDEA 366
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ + ++ ++ +RQ L+FSAT+P
Sbjct: 367 DRMLDMGFEPQIRKIVGQIRPDRQTLMFSATWP 399
Score = 53.6 bits (123), Expect = 5e-06
Identities = 25/62 (40%), Positives = 40/62 (64%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+FE R +L I G+++P+PIQ S PIALSG+D++ A+ G+GKT A+ +P +
Sbjct: 211 KFEYTSFPRYILSSIEAAGFKEPTPIQVQSWPIALSGRDMIGIAETGSGKTLAFLLPAIV 270
Query: 207 QV 212
+
Sbjct: 271 HI 272
>UniRef50_Q23WN3 Cluster: Helicase conserved C-terminal domain
containing protein; n=1; Tetrahymena thermophila
SB210|Rep: Helicase conserved C-terminal domain
containing protein - Tetrahymena thermophila SB210
Length = 602
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/80 (42%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Frame = +2
Query: 518 LRDDIMRIYQNVQV---IIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
L ++ IY+ V++ ++ TPGR D++DKQ M+ CR +VLDEAD+LL F+ +
Sbjct: 271 LMNNTFEIYEVVELQLDMVGTPGRTSDMVDKQKFNMNLCRYIVLDEADRLLDMIFEKEIR 330
Query: 689 MVISRLPKERQILLFSATFP 748
+I +P RQ LLFS+T P
Sbjct: 331 NIIDHVPGARQTLLFSSTMP 350
Score = 43.2 bits (97), Expect = 0.007
Identities = 20/61 (32%), Positives = 34/61 (55%)
Frame = +3
Query: 33 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+E ++++ + EK +KP+PIQ +P L G+D++ A G GKT + +P L
Sbjct: 139 KEMKFPKKIIAILKEKKVKKPTPIQMVGLPTVLLGRDMIGIAPTGQGKTIVFLLPALVMA 198
Query: 213 I 215
I
Sbjct: 199 I 199
>UniRef50_Q16JA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 727
Score = 68.1 bits (159), Expect = 2e-10
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQ-VAKMDQCRMLVLDE 646
GK H + G NL+ + R++Q + +II TPGR++ MD+ + ++LVLDE
Sbjct: 158 GKLHDFTTGLIIGGQNLKAEKNRLHQ-LNIIICTPGRLLQHMDQNPLFDCTNLKILVLDE 216
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD+ L F+ ++ +I LP ERQ LLFSAT
Sbjct: 217 ADRCLDLGFESAMNAIIENLPSERQTLLFSAT 248
Score = 59.3 bits (137), Expect = 1e-07
Identities = 29/63 (46%), Positives = 42/63 (66%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F +F L ++ L G+ + + KP+ IQ SI AL GKD+LA AK G+GKT A+ IPV
Sbjct: 62 SSFSDFPLSKKTLGGLKQGQYHKPTAIQRESILPALQGKDILAAAKTGSGKTLAFLIPVF 121
Query: 204 EQV 212
E++
Sbjct: 122 EKL 124
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/45 (37%), Positives = 24/45 (53%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
K D + ALI+ PTRELALQ + ++ K D + G Q +
Sbjct: 131 KLDGLGALIITPTRELALQIFETVAKIGKLHDFTTGLIIGGQNLK 175
>UniRef50_P38919 Cluster: Eukaryotic initiation factor 4A-III;
n=366; root|Rep: Eukaryotic initiation factor 4A-III -
Homo sapiens (Human)
Length = 411
Score = 68.1 bits (159), Expect = 2e-10
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
H+C G GTN+ +DI ++ V+ TPGR+ D++ ++ + +MLVLDEAD++L+
Sbjct: 138 HACIG---GTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLVLDEADEMLN 194
Query: 665 QDFKGMLDMVISRLPKERQILLFSATFP 748
+ FK + V LP Q++L SAT P
Sbjct: 195 KGFKEQIYDVYRYLPPATQVVLISATLP 222
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/59 (44%), Positives = 42/59 (71%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F+ L+ +LL GI+ G+EKPS IQ+ +I + G+DV+A++++GTGKT + I VL+
Sbjct: 40 FDTMGLREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQ 98
>UniRef50_Q1QYG3 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Chromohalobacter salexigens DSM 3043|Rep: DEAD/DEAH box
helicase-like protein - Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB13768)
Length = 568
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/80 (41%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G R+ + + + QVI+ TPGR+ID +D+ K+D LVLDEAD++L F +
Sbjct: 115 GQEYREQLSGLRRGAQVIVGTPGRVIDHLDRGSLKLDGLNALVLDEADEMLRMGFIDDVK 174
Query: 689 MVISRLPKERQILLFSATFP 748
V+S PK+ Q + FSAT P
Sbjct: 175 RVVSDTPKDAQRVFFSATLP 194
Score = 55.6 bits (128), Expect = 1e-06
Identities = 26/61 (42%), Positives = 38/61 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L +L + G+E PS IQ +IP L G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 11 FAELSLPSTILSTLETLGYETPSLIQAKTIPALLEGRDVLGQAQTGTGKTAAFALPLLSR 70
Query: 210 V 212
+
Sbjct: 71 L 71
>UniRef50_O07897 Cluster: Heat resistant RNA dependent ATPase; n=3;
Thermus thermophilus|Rep: Heat resistant RNA dependent
ATPase - Thermus thermophilus
Length = 510
Score = 67.7 bits (158), Expect = 3e-10
Identities = 28/62 (45%), Positives = 46/62 (74%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
EF++F LK E+L + +G P+PIQ A++P+AL GKD++ +A+ GTGKT A+ +P+ E
Sbjct: 2 EFKDFPLKPEILEALHGRGLTTPTPIQAAALPLALEGKDLIGQARTGTGKTLAFALPIAE 61
Query: 207 QV 212
++
Sbjct: 62 RL 63
Score = 63.7 bits (148), Expect = 5e-09
Identities = 30/82 (36%), Positives = 47/82 (57%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT + + ++ATPGR +D + + V + + + VLDEAD++LS F+
Sbjct: 105 YGGTGYGKQKEALLRGADAVVATPGRALDYLRQGVLDLSRVEVAVLDEADEMLSMGFEEE 164
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S P RQ LLFSAT P
Sbjct: 165 VEALLSATPPSRQTLLFSATLP 186
>UniRef50_A7BCL2 Cluster: Putative uncharacterized protein; n=1;
Actinomyces odontolyticus ATCC 17982|Rep: Putative
uncharacterized protein - Actinomyces odontolyticus ATCC
17982
Length = 722
Score = 67.7 bits (158), Expect = 3e-10
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G+ I + + QV++ TPGR+IDL++K + RMLVLDEAD++L F
Sbjct: 149 YGGSPYGPQIGALKRGAQVVVGTPGRVIDLIEKGALDLSHVRMLVLDEADEMLRMGFAED 208
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ + S P +R LFSAT P
Sbjct: 209 VETIASSAPDDRLTALFSATMP 230
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/64 (40%), Positives = 38/64 (59%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
DT F L E+L + + G+ P+PIQ A+IP L +DV+ A+ GTGKT A+
Sbjct: 41 DTDTVTFASLGLPEEILAAVTDMGFRVPTPIQAAAIPPLLELRDVVGIAQTGTGKTAAFG 100
Query: 192 IPVL 203
+P+L
Sbjct: 101 LPLL 104
Score = 34.7 bits (76), Expect = 2.4
Identities = 15/34 (44%), Positives = 23/34 (67%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHT 482
VD + +QAL++ PTRELA+Q++Q + A T
Sbjct: 107 VDADERNVQALVLAPTRELAMQSAQAIEDFAART 140
>UniRef50_Q4QC38 Cluster: RNA helicase, putative; n=7;
Trypanosomatidae|Rep: RNA helicase, putative -
Leishmania major
Length = 435
Score = 67.7 bits (158), Expect = 3e-10
Identities = 30/61 (49%), Positives = 42/61 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++FCLK EL I E G+E PS +Q ++P A+ G D+LA+AK+G GKT + +LEQ
Sbjct: 38 FQDFCLKSELANAIRENGFEHPSEVQHQALPKAMLGADILAQAKSGMGKTAVFVFALLEQ 97
Query: 210 V 212
V
Sbjct: 98 V 98
Score = 47.2 bits (107), Expect = 4e-04
Identities = 26/84 (30%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQNVQ-VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
++ G +++ ++ + V +I+ TPGRM L+ + + V+DE D+ L +D K
Sbjct: 143 FFGGIPEDENVKQLKKEVPAIIVGTPGRMKALIQNKAFDTTHVKWFVVDEFDRCL-EDVK 201
Query: 677 GMLDM--VISRLPKERQILLFSAT 742
D+ + +LPKE+Q+++FSAT
Sbjct: 202 MRRDVQEIFMKLPKEKQVMMFSAT 225
>UniRef50_O97032 Cluster: DjVLGB; n=2; Dugesia|Rep: DjVLGB - Dugesia
japonica (Planarian)
Length = 781
Score = 67.7 bits (158), Expect = 3e-10
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I + +++ATPGR++D ++K ++ C+ +VLDEAD++L F+
Sbjct: 296 YGGADTHSQIREVQMGCHLLVATPGRLVDFIEKNKISLEFCKYIVLDEADRMLDMGFEPQ 355
Query: 683 LDMVI--SRLPK--ERQILLFSATFP 748
+ +I S +P RQ L+FSATFP
Sbjct: 356 IRKIIEESNMPSGINRQTLMFSATFP 381
Score = 54.8 bits (126), Expect = 2e-06
Identities = 22/63 (34%), Positives = 40/63 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+E L + I +++P+PIQ+ +IP L +D++A A+ G+GKT A+ IP++
Sbjct: 186 FDELKLDPTIRNNILLASYQRPTPIQKNAIPAILEHRDIMACAQTGSGKTAAFLIPIINH 245
Query: 210 VIC 218
++C
Sbjct: 246 LVC 248
>UniRef50_O26305 Cluster: ATP-dependent RNA helicase, eIF-4A family;
n=1; Methanothermobacter thermautotrophicus str. Delta
H|Rep: ATP-dependent RNA helicase, eIF-4A family -
Methanobacterium thermoautotrophicum
Length = 425
Score = 67.7 bits (158), Expect = 3e-10
Identities = 32/91 (35%), Positives = 56/91 (61%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK + Y G ++ + I ++ + V VI+ATPGR+ID +++ + +VLDEA
Sbjct: 95 GKYMKVKVLAVYGGQSIGNQIAQLRRGVHVIVATPGRLIDHIERGTVDLGGISTVVLDEA 154
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
D++L+ F ++ ++S +P+ RQ +LFSAT
Sbjct: 155 DEMLNMGFIDDIERILSHVPERRQTMLFSAT 185
Score = 63.3 bits (147), Expect = 6e-09
Identities = 27/65 (41%), Positives = 42/65 (64%)
Frame = +3
Query: 18 RGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
+G EF EF + ++ + + G+E +PIQ ++P+ L G DV+ A+ GTGKT A+ IP
Sbjct: 2 KGLEFSEFDISGDINRALDDMGFESTTPIQALTLPVTLDGMDVVGEAQTGTGKTAAFAIP 61
Query: 198 VLEQV 212
VLE +
Sbjct: 62 VLENL 66
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/38 (42%), Positives = 24/38 (63%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQT 518
QALI+ PTREL LQ S+ + K+ ++V+ G Q+
Sbjct: 73 QALIICPTRELCLQVSEEIKRIGKYMKVKVLAVYGGQS 110
>UniRef50_Q9NQI0 Cluster: Probable ATP-dependent RNA helicase DDX4;
n=49; Euteleostomi|Rep: Probable ATP-dependent RNA
helicase DDX4 - Homo sapiens (Human)
Length = 724
Score = 67.7 bits (158), Expect = 3e-10
Identities = 36/86 (41%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT L I +I Q ++ ATPGR++D++ K+ + Q + LVLDEAD++L F
Sbjct: 400 YGGTQLGHSIRQIVQGCNILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPE 459
Query: 683 LDMVIS--RLP--KERQILLFSATFP 748
+ +IS +P ++RQ L+FSATFP
Sbjct: 460 MKKLISCPGMPSKEQRQTLMFSATFP 485
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/62 (41%), Positives = 43/62 (69%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FEE L + L I + G+ K +P+Q+ SIPI L+G+D++A A+ G+GKT A+ +P+L
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349
Query: 210 VI 215
++
Sbjct: 350 MM 351
>UniRef50_UPI0001509D93 Cluster: DEAD/DEAH box helicase family
protein; n=1; Tetrahymena thermophila SB210|Rep:
DEAD/DEAH box helicase family protein - Tetrahymena
thermophila SB210
Length = 476
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F +F LK++LL + E G+E+PS +Q IP A+ GKDVL +AK GTGKT + + VL
Sbjct: 38 SSFNDFSLKQDLLRSVKEAGFERPSEVQHQCIPNAIHGKDVLCQAKAGTGKTAVFVLSVL 97
Query: 204 EQV 212
Q+
Sbjct: 98 NQL 100
Score = 42.7 bits (96), Expect = 0.009
Identities = 24/95 (25%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIY-QNVQVIIATPGRMIDLMDKQ--VAKMDQCRMLVL 640
GK Y G DI + + +++ATPGR + L+ + V + ++
Sbjct: 130 GKFTNFKVKAVYGGVEESVDIHTLKTKKPHILVATPGRCLSLIKAKPSVIETQNIEYFII 189
Query: 641 DEADKLLSQD-FKGMLDMVISRLPKERQILLFSAT 742
DE D++LS + + + + LP+++Q+++FS T
Sbjct: 190 DECDRVLSSNKMRSDVQNIFYELPRKKQVMMFSGT 224
>UniRef50_Q9PGP6 Cluster: ATP-dependent RNA helicase; n=10; cellular
organisms|Rep: ATP-dependent RNA helicase - Xylella
fastidiosa
Length = 614
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + + V VI+ TPGR+ID +++ + + + LVLDEAD++L F
Sbjct: 119 YGGQSYGQQLAALKRGVHVIVGTPGRVIDHLERGTLDLSELKTLVLDEADEMLRMGFIED 178
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ V+ +LP RQ+ LFSAT P
Sbjct: 179 VEEVLRKLPASRQVALFSATMP 200
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/62 (41%), Positives = 42/62 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L ++ + + G+E PSPIQ A+IP L+G+DVL +A+ GTGKT A+ +P+L +
Sbjct: 17 FADLGLSDAVMQAVTKIGYETPSPIQAATIPALLAGRDVLGQAQTGTGKTAAFALPLLTR 76
Query: 210 VI 215
+
Sbjct: 77 TV 78
>UniRef50_Q0BSI7 Cluster: ATP-dependent RNA helicase; n=12;
Alphaproteobacteria|Rep: ATP-dependent RNA helicase -
Granulobacter bethesdensis (strain ATCC BAA-1260 /
CGDNIH1)
Length = 763
Score = 67.3 bits (157), Expect = 4e-10
Identities = 33/78 (42%), Positives = 49/78 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ D + + V V+IATPGR+IDL D+ + R+LV+DEAD++L F ++
Sbjct: 331 GESMNDQRDVLSKGVDVLIATPGRLIDLFDRGGLLLTDTRILVIDEADRMLDMGFIPDVE 390
Query: 689 MVISRLPKERQILLFSAT 742
++S LP RQ L FSAT
Sbjct: 391 RIVSLLPHNRQTLFFSAT 408
Score = 53.6 bits (123), Expect = 5e-06
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
F + L + I E G+ P+PIQ +IP+ L G+DVL A+ GTGKT ++ +P+++
Sbjct: 225 FADLGLSEPVQRAITEMGYLHPTPIQAQAIPVVLMGRDVLGCAQTGTGKTASFTLPMMD 283
>UniRef50_Q54T87 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 586
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/75 (45%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Frame = +2
Query: 527 DIMRIYQN-VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISR 703
D RI +N V ++I TPGR+ DL+ K + + LVLDEAD++L F ++ +I +
Sbjct: 226 DQSRILRNGVDIVIGTPGRLNDLLRKH--HLSSVQYLVLDEADRMLDMGFMPQIESLIDQ 283
Query: 704 LPKERQILLFSATFP 748
+PKERQ L+FSAT+P
Sbjct: 284 IPKERQTLMFSATWP 298
Score = 40.7 bits (91), Expect = 0.037
Identities = 19/46 (41%), Positives = 29/46 (63%)
Frame = +3
Query: 78 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
+G+ P+ IQ S PI L G D++ A G+GKT A+ +P L ++I
Sbjct: 128 QGFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKII 173
>UniRef50_O97031 Cluster: DjVLGA; n=1; Dugesia japonica|Rep: DjVLGA
- Dugesia japonica (Planarian)
Length = 726
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++R + I Q +++ATPGR+ D++++ +D R LVLDEAD++L F+
Sbjct: 326 YGGRDIRGQLQDISQGCNMLVATPGRLSDMLERCKIGLDCIRYLVLDEADRMLDMGFEPQ 385
Query: 683 LDMVISRL----PKERQILLFSATFP 748
+ ++ + P +RQ L+FSATFP
Sbjct: 386 IRKIVEQTNMPPPGQRQTLMFSATFP 411
Score = 44.8 bits (101), Expect = 0.002
Identities = 16/43 (37%), Positives = 31/43 (72%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+ +P+P+Q ++PI + +D++A A+ G+GKT A+ IP+L +
Sbjct: 231 YTRPTPVQRYAVPIIMQRRDLMACAQTGSGKTAAFLIPLLSMM 273
>UniRef50_Q5BF42 Cluster: Putative uncharacterized protein; n=1;
Emericella nidulans|Rep: Putative uncharacterized
protein - Emericella nidulans (Aspergillus nidulans)
Length = 1676
Score = 67.3 bits (157), Expect = 4e-10
Identities = 28/71 (39%), Positives = 47/71 (66%)
Frame = +3
Query: 3 ARADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTG 182
A ++ F+EF L R +L G+ + P+PIQ+ +IP+AL GKD++ A G+GKT
Sbjct: 783 AATNSAKRSFQEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTA 842
Query: 183 AYCIPVLEQVI 215
A+ +P+LE+++
Sbjct: 843 AFVVPILERLL 853
Score = 64.1 bits (149), Expect = 3e-09
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGML 685
G +LR+ + + VIIATPGR ID M + +D +LVLDEAD++L F L
Sbjct: 898 GFSLREQENVLKKRPDVIIATPGRFIDHMRNSASFTVDTLEILVLDEADRMLEDGFADEL 957
Query: 686 DMVISRLPKERQILLFSAT 742
+ +++ +PK RQ +LFSAT
Sbjct: 958 NEILTTIPKSRQTMLFSAT 976
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/33 (45%), Positives = 22/33 (66%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDI 488
K T + I++PTRELA+Q + +LA +TDI
Sbjct: 858 KVPTSRVAILMPTRELAVQCYNVATKLATYTDI 890
>UniRef50_P25808 Cluster: ATP-dependent rRNA helicase SPB4; n=10;
Saccharomycetales|Rep: ATP-dependent rRNA helicase SPB4
- Saccharomyces cerevisiae (Baker's yeast)
Length = 606
Score = 67.3 bits (157), Expect = 4e-10
Identities = 34/82 (41%), Positives = 50/82 (60%), Gaps = 4/82 (4%)
Frame = +2
Query: 509 GTN---LRDDIMRIYQN-VQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
GTN +RDD+ +N Q++I TPGR++D + K C M+V+DEAD+LL F
Sbjct: 124 GTNEATVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRLLDMSFI 183
Query: 677 GMLDMVISRLPKERQILLFSAT 742
+ ++ LPK+R+ LFSAT
Sbjct: 184 KDTEKILRLLPKQRRTGLFSAT 205
Score = 49.6 bits (113), Expect = 8e-05
Identities = 23/59 (38%), Positives = 37/59 (62%)
Frame = +3
Query: 39 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
F L + G+ G+E +P+Q ++IP+ KDV+ + G+GKT A+ IPVLE+V+
Sbjct: 12 FSLLPWIRTGLDVMGFETMTPVQASTIPMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVV 70
>UniRef50_P19109 Cluster: ATP-dependent RNA helicase p62; n=9;
Eukaryota|Rep: ATP-dependent RNA helicase p62 -
Drosophila melanogaster (Fruit fly)
Length = 719
Score = 67.3 bits (157), Expect = 4e-10
Identities = 32/91 (35%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Frame = +2
Query: 482 RHSC--NGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADK 655
R++C G +G +RD + + +++IATPGR+ID + + +C LVLDEAD+
Sbjct: 384 RNTCVFGGAPKGGQMRD----LQRGCEIVIATPGRLIDFLSAGSTNLKRCTYLVLDEADR 439
Query: 656 LLSQDFKGMLDMVISRLPKERQILLFSATFP 748
+L F+ + ++S++ +RQ L++SAT+P
Sbjct: 440 MLDMGFEPQIRKIVSQIRPDRQTLMWSATWP 470
Score = 44.4 bits (100), Expect = 0.003
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L ++ I +G++ P+ IQ PIA+SG + + AK G+GKT Y +P +
Sbjct: 282 DFSEVHLPDYVMKEIRRQGYKAPTAIQAQGWPIAMSGSNFVGIAKTGSGKTLGYILPAIV 341
Query: 207 QV 212
+
Sbjct: 342 HI 343
>UniRef50_Q5JKF2 Cluster: DEAD-box ATP-dependent RNA helicase 40;
n=8; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 40 - Oryza sativa subsp. japonica (Rice)
Length = 792
Score = 67.3 bits (157), Expect = 4e-10
Identities = 30/93 (32%), Positives = 54/93 (58%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G++ R S Y G + + + V V++ATPGR+ D+++ + + Q LVLDEA
Sbjct: 246 GRSSRISSTCLYGGAPKGPQLRDLDRGVDVVVATPGRLNDILEMRRISLKQVSYLVLDEA 305
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F+ + ++ +P RQ L+++AT+P
Sbjct: 306 DRMLDMGFEPQIRKIVKEIPPRRQTLMYTATWP 338
Score = 48.8 bits (111), Expect = 1e-04
Identities = 26/56 (46%), Positives = 33/56 (58%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
FE E+L I G+ P+PIQ S PIAL +DV+A AK G+GKT Y +P
Sbjct: 152 FETGGFPPEILKEIQRAGFSSPTPIQAQSWPIALQCQDVVAIAKTGSGKTLGYLLP 207
>UniRef50_Q9SW44 Cluster: DEAD-box ATP-dependent RNA helicase 16;
n=5; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 16 - Arabidopsis thaliana (Mouse-ear cress)
Length = 626
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/61 (50%), Positives = 45/61 (73%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FEE L L+ + +KG EKP+ IQ+++IP L GKDV+ARAK G+GKT AY +P+L++
Sbjct: 48 FEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLLQK 107
Query: 210 V 212
+
Sbjct: 108 L 108
Score = 37.1 bits (82), Expect = 0.46
Identities = 21/45 (46%), Positives = 27/45 (60%)
Frame = +2
Query: 608 AKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
A + +LVLDEAD LLS ++ L V S +P+ Q LL SAT
Sbjct: 196 AVSESLSILVLDEADLLLSYGYEDNLRSVTSIIPRRCQCLLMSAT 240
>UniRef50_A5E058 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=1; Lodderomyces elongisporus NRRL
YB-4239|Rep: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5 - Lodderomyces elongisporus (Yeast)
(Saccharomyces elongisporus)
Length = 994
Score = 67.3 bits (157), Expect = 4e-10
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 3/85 (3%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCR---MLVLDEADKLLSQDF 673
Y G+N+ + I + + V VI+ATPGR+IDL+ ++ R +VLDEAD++ F
Sbjct: 496 YGGSNIENQISELKRGVNVIVATPGRLIDLLAANGGRITTLRRTTFVVLDEADRMFDMGF 555
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + + +++ ++Q +LFSATFP
Sbjct: 556 EPQIQKIFTQIRPDKQTVLFSATFP 580
Score = 53.2 bits (122), Expect = 7e-06
Identities = 25/58 (43%), Positives = 39/58 (67%), Gaps = 2/58 (3%)
Frame = +3
Query: 45 LKRELLMGIFEK--GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L E +M + + G+ KPSPIQ +IPI LSG+D++ AK G+GKT +Y +P++ +
Sbjct: 393 LMPESVMSVIQNDLGFAKPSPIQCQAIPIVLSGRDMIGVAKTGSGKTLSYVLPMVRHI 450
>UniRef50_Q11039 Cluster: Cold-shock DEAD box protein A homolog;
n=31; Bacteria|Rep: Cold-shock DEAD box protein A
homolog - Mycobacterium tuberculosis
Length = 563
Score = 67.3 bits (157), Expect = 4e-10
Identities = 29/82 (35%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G++ + + + QV++ TPGRMID +++ + + LVLDEAD++L+ F
Sbjct: 117 YGGSSYAVQLAGLRRGAQVVVGTPGRMIDHLERATLDLSRVDFLVLDEADEMLTMGFADD 176
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S P+ +Q+ LFSAT P
Sbjct: 177 VERILSETPEYKQVALFSATMP 198
Score = 55.2 bits (127), Expect = 2e-06
Identities = 24/61 (39%), Positives = 39/61 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + + +L I + G+E P+ IQ A+IP ++G DV+ A+ GTGKT A+ IP+L +
Sbjct: 15 FADLQIHPRVLRAIGDVGYESPTAIQAATIPALMAGSDVVGLAQTGTGKTAAFAIPMLSK 74
Query: 210 V 212
+
Sbjct: 75 I 75
>UniRef50_UPI0000DB7667 Cluster: PREDICTED: similar to CG32344-PA;
n=1; Apis mellifera|Rep: PREDICTED: similar to
CG32344-PA - Apis mellifera
Length = 743
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/80 (37%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N+ + I+ N ++IATPGR + + + +++ +V DEAD+L F ++
Sbjct: 143 GDNMENQFSAIHGNPDILIATPGRFLHICIEMDLQLNNIEYVVFDEADRLFEMGFGEQIN 202
Query: 689 MVISRLPKERQILLFSATFP 748
+I+RLP+ RQ LLFSAT P
Sbjct: 203 EIINRLPESRQTLLFSATLP 222
Score = 63.7 bits (148), Expect = 5e-09
Identities = 25/61 (40%), Positives = 43/61 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ L +L GI ++G++ P+PIQ +IP+AL G+D++A A+ G+GKT + IP+ E+
Sbjct: 38 FQSMALSFPILKGILKRGYKIPTPIQRKTIPLALEGRDIVAMARTGSGKTACFLIPLFEK 97
Query: 210 V 212
+
Sbjct: 98 L 98
Score = 36.3 bits (80), Expect = 0.80
Identities = 17/40 (42%), Positives = 24/40 (60%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ALI+ PTRELALQT + EL + T ++ + G E
Sbjct: 108 RALILSPTRELALQTLKFIKELGRFTGLKATIILGGDNME 147
>UniRef50_Q4SJI2 Cluster: Chromosome 4 SCAF14575, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 4 SCAF14575, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 532
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ D +++N +II TPGR++ ++ + K+ +V DEAD+L F L
Sbjct: 144 GDSMDDQFAALHENPDIIIGTPGRLMHVIKEMNLKLQNVEYVVFDEADRLFEMGFAEQLQ 203
Query: 689 MVISRLPKERQILLFSATFP 748
+I R P+ RQ LLFSAT P
Sbjct: 204 EIIRRFPETRQTLLFSATLP 223
Score = 62.9 bits (146), Expect = 8e-09
Identities = 26/61 (42%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ L + G+ KG++ P+PIQ +IP+ L GKDV+A A+ G+GKT A+ IP+ E+
Sbjct: 39 FQSMGLSFPVFKGVMRKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLIPMFER 98
Query: 210 V 212
+
Sbjct: 99 L 99
Score = 36.3 bits (80), Expect = 0.80
Identities = 17/40 (42%), Positives = 25/40 (62%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ALI+ PTRELALQT + EL K T ++ + G + +
Sbjct: 109 RALILSPTRELALQTMKFTKELGKFTKLKTALILGGDSMD 148
>UniRef50_Q92GV2 Cluster: ATP-dependent RNA helicase RhlE; n=10;
Rickettsia|Rep: ATP-dependent RNA helicase RhlE -
Rickettsia conorii
Length = 414
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/80 (38%), Positives = 52/80 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + +++ +N +VII TPGR+ID +++ K+D+ + VLDE D++L K L+
Sbjct: 106 GEPMPKQFIQLKKNPKVIIGTPGRIIDHLNRGSLKIDRIGITVLDEMDRMLDMGMKEQLE 165
Query: 689 MVISRLPKERQILLFSATFP 748
+ LP++RQ+L+FSAT P
Sbjct: 166 EINKFLPEKRQVLMFSATMP 185
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/61 (37%), Positives = 41/61 (67%)
Frame = +3
Query: 33 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+ F L EL++ + +P+ IQ+ SIP+A++G D+LA ++ G+GKT AY +P+++
Sbjct: 6 KNFNLSEELIIALETMNITEPTEIQKQSIPVAMAGSDILASSQTGSGKTLAYLLPLIDSF 65
Query: 213 I 215
I
Sbjct: 66 I 66
>UniRef50_Q5NML9 Cluster: DNA and RNA helicase; n=28;
Alphaproteobacteria|Rep: DNA and RNA helicase -
Zymomonas mobilis
Length = 458
Score = 66.9 bits (156), Expect = 5e-10
Identities = 32/89 (35%), Positives = 50/89 (56%)
Frame = +2
Query: 482 RHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL 661
R S N + G + + + + +++ATPGR++DL+D++ + + VLDEAD++L
Sbjct: 107 RMSVNAVFGGVPIGRQMRMLDRGTDILVATPGRLLDLIDQRALVLKDVEVFVLDEADQML 166
Query: 662 SQDFKGMLDMVISRLPKERQILLFSATFP 748
F L + LPK RQ L FSAT P
Sbjct: 167 DLGFIHALRRIDKLLPKNRQTLFFSATMP 195
Score = 50.0 bits (114), Expect = 6e-05
Identities = 23/56 (41%), Positives = 33/56 (58%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
F+ L L+ + G+ KP+PIQ +IP L GKD+ A+ GTGKT A+ +P
Sbjct: 8 FKTLGLDSSLVQALDGLGYSKPTPIQAQAIPHLLEGKDLCGIAQTGTGKTAAFALP 63
>UniRef50_Q1MY97 Cluster: DEAD/DEAH box helicase-like protein; n=2;
Gammaproteobacteria|Rep: DEAD/DEAH box helicase-like
protein - Oceanobacter sp. RED65
Length = 614
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G++ + Q Q ++ TPGR++D + + K++ R +VLDEAD++L F
Sbjct: 110 YGGSDFGSQFRALKQGPQWVVGTPGRVMDHIRRGTLKLEGIRAVVLDEADEMLRMGFIDD 169
Query: 683 LDMVISRLPKERQILLFSATFP 748
+D V+ ++P++RQI LFSAT P
Sbjct: 170 VDWVLDQVPEKRQIALFSATMP 191
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/58 (55%), Positives = 39/58 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
F L LL I E+G+E+PSPIQE SIP L GKDVL A+ GTGKT A+ +P+L
Sbjct: 8 FASLGLPFNLLRAIEEQGYEQPSPIQEQSIPHLLEGKDVLGLAQTGTGKTAAFTLPLL 65
>UniRef50_Q0C4R1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=1; Hyphomonas neptunium ATCC 15444|Rep:
ATP-dependent RNA helicase, DEAD/DEAH box family -
Hyphomonas neptunium (strain ATCC 15444)
Length = 708
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/80 (35%), Positives = 51/80 (63%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++RD+ + + +++ TPGR++D +++ R +VLDEAD++L F+ L+
Sbjct: 112 GMDMRDERRALERGAHIVVGTPGRLVDHINRGSFDTSAIRAVVLDEADEMLDLGFREELE 171
Query: 689 MVISRLPKERQILLFSATFP 748
+++ PKER+ L+FSAT P
Sbjct: 172 LILEDTPKERRTLMFSATVP 191
Score = 39.1 bits (87), Expect = 0.11
Identities = 18/57 (31%), Positives = 33/57 (57%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
L L I E+G+E + +Q A+ L G+D+L A+ G+GKT A+ + + +++
Sbjct: 7 LPAALRAAIHERGYETLTEVQAAATAPELEGRDLLVSARTGSGKTVAFGLAIANELL 63
>UniRef50_A6TTG0 Cluster: DEAD/DEAH box helicase domain protein;
n=3; Clostridiaceae|Rep: DEAD/DEAH box helicase domain
protein - Alkaliphilus metalliredigens QYMF
Length = 549
Score = 66.9 bits (156), Expect = 5e-10
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + ++ ++ +II TPGR++D + ++ + + MLVLDEAD++L F
Sbjct: 106 YGGQDVEQQLRKLKGSIHIIIGTPGRLLDHLRRKTINLGKLSMLVLDEADQMLHMGFLRD 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ +++ +PK RQ + FSAT P
Sbjct: 166 VEDIMTHIPKRRQNMFFSATMP 187
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/63 (36%), Positives = 42/63 (66%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N+F + + E+ + + +P+P+Q +IP L+ +DV+A+A+ GTGKT A+ +P+L
Sbjct: 3 NKFAKLGISEEIENVLNKSDITEPTPVQLQAIPPLLAQRDVMAQAQTGTGKTLAFILPIL 62
Query: 204 EQV 212
E+V
Sbjct: 63 ERV 65
Score = 41.1 bits (92), Expect = 0.028
Identities = 21/48 (43%), Positives = 30/48 (62%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
V+ +K TIQALI+ PTRELA+Q + +LA+ I ++ G Q E
Sbjct: 65 VNVEKPTIQALIITPTRELAIQITAETKKLAEVKGINILAAYGGQDVE 112
>UniRef50_Q17KA8 Cluster: DEAD box ATP-dependent RNA helicase; n=1;
Aedes aegypti|Rep: DEAD box ATP-dependent RNA helicase -
Aedes aegypti (Yellowfever mosquito)
Length = 718
Score = 66.9 bits (156), Expect = 5e-10
Identities = 30/75 (40%), Positives = 51/75 (68%)
Frame = +2
Query: 524 DDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISR 703
DD+ R V+++IATPGR+ID ++ + + LVLDEAD++L F+ + +IS+
Sbjct: 219 DDLRR---GVEIVIATPGRLIDFLESGTTNLRRTTYLVLDEADRMLDMGFEPQIRKIISQ 275
Query: 704 LPKERQILLFSATFP 748
+ +RQ+L++SAT+P
Sbjct: 276 IRPDRQVLMWSATWP 290
Score = 44.4 bits (100), Expect = 0.003
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +3
Query: 78 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+G+++P+ IQ IA+SG+D++ AK G+GKT AY +P L
Sbjct: 119 QGFQEPTSIQAVGWSIAMSGRDMVGIAKTGSGKTLAYILPAL 160
>UniRef50_A2ED04 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 521
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/90 (34%), Positives = 54/90 (60%)
Frame = +2
Query: 479 HRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKL 658
++H C Y G + I ++ + +++ ATPGR+ID + V ++ LVLDEAD++
Sbjct: 187 YKHVC--IYGGEDRHRQINKLRFHPEIVTATPGRLIDFLQSGVFNPNRANFLVLDEADRM 244
Query: 659 LSQDFKGMLDMVISRLPKERQILLFSATFP 748
L F+ + +I+ L K+R+ +FSAT+P
Sbjct: 245 LDMGFEPQIRAIIASLTKDRETFMFSATWP 274
Score = 62.5 bits (145), Expect = 1e-08
Identities = 28/61 (45%), Positives = 38/61 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FEE L +E++ I E W P+PIQ SIPI L G D++ AK G+GKT ++ IP L
Sbjct: 87 FEELNLPQEIMEVIKENNWTNPTPIQSLSIPIGLKGNDMVGIAKTGSGKTASFLIPALMH 146
Query: 210 V 212
+
Sbjct: 147 I 147
>UniRef50_A2DES1 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 640
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/80 (38%), Positives = 47/80 (58%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ + + I VIIATPGR IDL+ + + LV+DEAD++ F+ +
Sbjct: 210 GNDIENQLRAIKNGSNVIIATPGRFIDLLSSSAFNIKKVSYLVIDEADRMFDLGFEPQVI 269
Query: 689 MVISRLPKERQILLFSATFP 748
+ R+ K+RQ L+FSATFP
Sbjct: 270 RIAERMRKDRQTLMFSATFP 289
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/46 (43%), Positives = 32/46 (69%)
Frame = +3
Query: 78 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
+G+++P+ IQ +IP LSG+D++ A G+GKT A+ IP L V+
Sbjct: 119 RGFKQPTSIQCQAIPCILSGRDIIGCAVTGSGKTLAFIIPCLLHVL 164
>UniRef50_A1IIT4 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 548
Score = 66.9 bits (156), Expect = 5e-10
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Frame = +2
Query: 497 GYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
G Y G N I + + +IATPGR+ID +D+ + +MD C +VLDEAD++L F+
Sbjct: 223 GVYGGQNRSRQIHELSKGCHFMIATPGRLIDFLDEGMLRMDHCHSVVLDEADRMLDMGFE 282
Query: 677 GMLDMVISR----LPK------ERQILLFSATFP 748
+ ++S +P+ RQ +LFSATFP
Sbjct: 283 HQIRKILSNPDYGMPQPSGDGLPRQTVLFSATFP 316
>UniRef50_Q81VG0 Cluster: DEAD-box ATP-dependent RNA helicase ydbR;
n=16; cellular organisms|Rep: DEAD-box ATP-dependent RNA
helicase ydbR - Bacillus anthracis
Length = 528
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/98 (31%), Positives = 58/98 (59%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+LY GK R Y G ++ I + ++ +I+ TPGR++D ++++ ++ +
Sbjct: 89 ELYKIGKHKRVRILPIYGGQDINRQIRALKKHPHIIVGTPGRILDHINRKTLRLQNVETV 148
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDEAD++L+ F ++ +++ +P+ Q LLFSAT P
Sbjct: 149 VLDEADEMLNMGFIEDIEAILTDVPETHQTLLFSATMP 186
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/61 (44%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L LL + G+E+ +PIQ +IP AL GKD++ +A+ GTGKT A+ +P+L++
Sbjct: 4 FRELGLSDSLLQSVESMGFEEATPIQAETIPHALQGKDIIGQAQTGTGKTAAFGLPLLDK 63
Query: 210 V 212
V
Sbjct: 64 V 64
Score = 43.6 bits (98), Expect = 0.005
Identities = 16/45 (35%), Positives = 29/45 (64%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQ 515
VD K+++Q +++ PTRELA+Q + ++ KH +R++ G Q
Sbjct: 64 VDTHKESVQGIVIAPTRELAIQVGEELYKIGKHKRVRILPIYGGQ 108
>UniRef50_Q9M2F9 Cluster: DEAD-box ATP-dependent RNA helicase 52;
n=22; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
52 - Arabidopsis thaliana (Mouse-ear cress)
Length = 646
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT + I + + V +++ATPGR+ DL+++ + R L LDEAD++L F+
Sbjct: 259 YGGTPVNQQIRELERGVDILVATPGRLNDLLERGRVSLQMVRFLALDEADRMLDMGFEPQ 318
Query: 683 LDMVISRL----PKERQILLFSATFP 748
+ ++ ++ P RQ +LFSATFP
Sbjct: 319 IRKIVQQMDMPPPGVRQTMLFSATFP 344
Score = 56.0 bits (129), Expect = 9e-07
Identities = 24/64 (37%), Positives = 40/64 (62%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N F E L L + I + KP+P+Q +IPI +G+D++A A+ G+GKT A+C P++
Sbjct: 146 NTFAEIDLGEALNLNIQRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205
Query: 204 EQVI 215
++
Sbjct: 206 SGIM 209
>UniRef50_Q8H0U8 Cluster: DEAD-box ATP-dependent RNA helicase 42;
n=2; Arabidopsis thaliana|Rep: DEAD-box ATP-dependent
RNA helicase 42 - Arabidopsis thaliana (Mouse-ear cress)
Length = 1166
Score = 66.9 bits (156), Expect = 5e-10
Identities = 31/89 (34%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCR---MLVLDEADKLL 661
C Y G+ + I + + ++++ TPGRMID++ K+ R LV+DEAD++
Sbjct: 633 CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTFLVMDEADRMF 692
Query: 662 SQDFKGMLDMVISRLPKERQILLFSATFP 748
F+ + +I + ERQ +LFSATFP
Sbjct: 693 DMGFEPQITRIIQNIRPERQTVLFSATFP 721
Score = 48.8 bits (111), Expect = 1e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L ++L + + +EKP PIQ ++PI +SG+D + AK G+GKT + +P+L +
Sbjct: 536 LTSKILDTMKKLNYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI 591
>UniRef50_P0C2N7 Cluster: ATP-dependent RNA helicase DRS1; n=2;
Chaetomium globosum|Rep: ATP-dependent RNA helicase DRS1
- Chaetomium globosum (Soil fungus)
Length = 795
Score = 66.9 bits (156), Expect = 5e-10
Identities = 29/64 (45%), Positives = 44/64 (68%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F+ L R +L G+ G+ KP+PIQ +IPIAL GKDV+ A G+GKT A+ +P+L
Sbjct: 276 SSFQGMSLSRPILRGLTSVGFTKPTPIQAKTIPIALMGKDVVGGAVTGSGKTAAFVVPIL 335
Query: 204 EQVI 215
E+++
Sbjct: 336 ERLL 339
Score = 60.1 bits (139), Expect = 6e-08
Identities = 30/63 (47%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
V+IATPGR ID M + ++ +LVLDEAD++L F L+ +++ LPK RQ +LF
Sbjct: 400 VVIATPGRFIDHMRNSASFAVETVEILVLDEADRMLEDGFADELNEILTTLPKSRQTMLF 459
Query: 734 SAT 742
SAT
Sbjct: 460 SAT 462
Score = 41.1 bits (92), Expect = 0.028
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 387 PKK-DTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFEM 527
PKK T + +++ PTRELA+Q + +LA HTDI+ + G + ++
Sbjct: 342 PKKVPTTRVVVLTPTRELAIQCHSVATKLASHTDIKFCLAVGGLSLKV 389
>UniRef50_Q09719 Cluster: ATP-dependent RNA helicase dbp10; n=2;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp10 - Schizosaccharomyces pombe (Fission
yeast)
Length = 848
Score = 66.9 bits (156), Expect = 5e-10
Identities = 27/69 (39%), Positives = 47/69 (68%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
+ + + + F+ L + LL IF+KG++ P+PIQ +IP+ L G+DV+ A+ G+GKT A
Sbjct: 63 KGNGKASNFQSMGLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAA 122
Query: 186 YCIPVLEQV 212
+ IP++E +
Sbjct: 123 FVIPMIEHL 131
Score = 58.4 bits (135), Expect = 2e-07
Identities = 27/80 (33%), Positives = 41/80 (51%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G +L + + +++ATPGR + L + ++ +V DEAD+L F L
Sbjct: 176 GVSLEEQFSLLSGKPDIVVATPGRFLHLKVEMKLELSSIEYVVFDEADRLFEMGFAAQLT 235
Query: 689 MVISRLPKERQILLFSATFP 748
++ LP RQ LLFSAT P
Sbjct: 236 EILHALPTSRQTLLFSATLP 255
Score = 36.7 bits (81), Expect = 0.61
Identities = 17/40 (42%), Positives = 26/40 (65%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ALI+ P RELALQT ++ + +K TD+R + G + E
Sbjct: 141 RALILSPNRELALQTVKVVKDFSKGTDLRSVAIVGGVSLE 180
>UniRef50_UPI00015B4D43 Cluster: PREDICTED: hypothetical protein;
n=1; Nasonia vitripennis|Rep: PREDICTED: hypothetical
protein - Nasonia vitripennis
Length = 990
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/67 (43%), Positives = 44/67 (65%)
Frame = +2
Query: 548 NVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQIL 727
N + I PGR+ L+DK KMD R+ VLDEADKL+ + F+ ++ + ++LP RQ++
Sbjct: 142 NCHIAIGAPGRVKHLIDKGYLKMDHVRLFVLDEADKLMEESFQKDINYIYAKLPPNRQVI 201
Query: 728 LFSATFP 748
SAT+P
Sbjct: 202 SSSATYP 208
Score = 60.1 bits (139), Expect = 6e-08
Identities = 27/61 (44%), Positives = 39/61 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L +++L G+ G+ KPSPIQ SIP+ G D++ RAK+GTGKT + I LE
Sbjct: 26 FSQMGLSQQVLNGLLNCGFHKPSPIQHKSIPLGRCGFDLIVRAKSGTGKTAVFGIIALEM 85
Query: 210 V 212
+
Sbjct: 86 I 86
>UniRef50_UPI00015609AE Cluster: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53; n=2; Equus
caballus|Rep: PREDICTED: similar to DEAD
(Asp-Glu-Ala-Asp) box polypeptide 53 - Equus caballus
Length = 711
Score = 66.5 bits (155), Expect = 7e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G N ++ I I + V +IIATPGR+ DL + + LVLDEADK+L F+G
Sbjct: 413 YGGGNRKEQIQHITKGVDIIIATPGRLNDLQMNKCVNLRSITYLVLDEADKMLDLGFEGQ 472
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ + +RQ ++ SAT+P
Sbjct: 473 ITKILLDVRPDRQTVMTSATWP 494
Score = 50.0 bits (114), Expect = 6e-05
Identities = 22/48 (45%), Positives = 33/48 (68%)
Frame = +3
Query: 54 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
E+L I + G+++P+PIQ + PI L G D++ A+ GTGKT +Y IP
Sbjct: 315 EVLKSIKKAGFQRPTPIQSQAWPIVLQGMDLIGVAQTGTGKTLSYLIP 362
>UniRef50_Q8XKJ8 Cluster: ATP-dependent RNA helicase; n=12;
Clostridium|Rep: ATP-dependent RNA helicase -
Clostridium perfringens
Length = 528
Score = 66.5 bits (155), Expect = 7e-10
Identities = 33/93 (35%), Positives = 53/93 (56%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK + S Y G + I + V +++ TPGR++DL+ ++ ++ LVLDEA
Sbjct: 98 GKHEKLSVLPIYGGQPIDRQIRALKNGVDIVVGTPGRVLDLIRRKSLPLNDIGFLVLDEA 157
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L+ F L+ ++ L +RQ LLFSAT P
Sbjct: 158 DEMLNMGFIDDLEEIVKSLKTDRQTLLFSATMP 190
Score = 59.7 bits (138), Expect = 8e-08
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
+F++ LK LL I + G+E+PS IQ SIP+AL G D++ +A+ GTGKT A+
Sbjct: 5 KFDDLGLKESLLKAIKDMGFEEPSQIQAESIPVALEGHDIIGQAQTGTGKTAAF 58
Score = 39.9 bits (89), Expect = 0.065
Identities = 18/45 (40%), Positives = 28/45 (62%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
KK + +ALI+ PTRELA+Q ++ + L KH + V+ G Q +
Sbjct: 71 KKKSPKALILAPTRELAIQVNEELVRLGKHEKLSVLPIYGGQPID 115
>UniRef50_Q87HW1 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=6; Vibrio|Rep: ATP-dependent RNA helicase,
DEAD box family - Vibrio parahaemolyticus
Length = 421
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/81 (38%), Positives = 51/81 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT++ ++ + ++IATPGR++D + + + +LVLDEAD++L F
Sbjct: 112 YGGTSIGVQKNKLEEGADILIATPGRLLDHLFNGNVNISKTGVLVLDEADRMLDMGFWPD 171
Query: 683 LDMVISRLPKERQILLFSATF 745
L ++ RLP ++QI+LFSATF
Sbjct: 172 LQRILRRLPNDKQIMLFSATF 192
Score = 54.8 bits (126), Expect = 2e-06
Identities = 24/61 (39%), Positives = 40/61 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + ++++L+ + P+P+QE SIP L GKD+LA A+ GTGKT A+ +P+++
Sbjct: 9 FADLGIEQQLVETLNNMNIVTPTPVQEKSIPHVLEGKDLLAAAQTGTGKTAAFGLPIIQA 68
Query: 210 V 212
V
Sbjct: 69 V 69
Score = 38.3 bits (85), Expect = 0.20
Identities = 18/40 (45%), Positives = 25/40 (62%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+ T ALI+VPTRELA Q + A+HTD+R++ G
Sbjct: 74 RNGTPHALILVPTRELAQQVFDNLTQYAEHTDLRIVCVYG 113
>UniRef50_Q835K0 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=55; Lactobacillales|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Enterococcus faecalis
(Streptococcus faecalis)
Length = 449
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/86 (36%), Positives = 53/86 (61%), Gaps = 1/86 (1%)
Frame = +2
Query: 494 NGYYRGTNLRDDIMRI-YQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQD 670
+ + GT+ + + ++ +Q V+I TPGR++D+M++Q K+ V+DEAD L
Sbjct: 104 SNFVGGTDKQRQLNKLKHQQPHVVIGTPGRILDMMNEQALKVHTAFAFVVDEADMTLDMG 163
Query: 671 FKGMLDMVISRLPKERQILLFSATFP 748
F +D + RLP++ Q+L+FSAT P
Sbjct: 164 FLAEVDQIAGRLPEKLQMLVFSATIP 189
Score = 52.0 bits (119), Expect = 2e-05
Identities = 21/61 (34%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F + + + EKG+E+P+ +QE IPI GK V+ +++ G+GKT + +P++++
Sbjct: 4 FKQFQFQPFINEALAEKGFEEPTEVQEKLIPIIKKGKSVIGQSQTGSGKTHTFLLPLMDK 63
Query: 210 V 212
V
Sbjct: 64 V 64
>UniRef50_Q6MN67 Cluster: ATP-dependent RNA helicase; n=3;
Deltaproteobacteria|Rep: ATP-dependent RNA helicase -
Bdellovibrio bacteriovorus
Length = 505
Score = 66.5 bits (155), Expect = 7e-10
Identities = 29/63 (46%), Positives = 44/63 (69%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
NEF L ELL + E G+E +PIQ+ SIP+ L+GKD++ +AK G+GKT A+ +P+L
Sbjct: 47 NEFSTLPLSPELLTVVQELGFETLTPIQQESIPLLLAGKDIIGQAKTGSGKTAAFSLPIL 106
Query: 204 EQV 212
++
Sbjct: 107 NKI 109
Score = 64.1 bits (149), Expect = 3e-09
Identities = 30/80 (37%), Positives = 46/80 (57%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + R+ + VQ+++ TPGR+ D + + + + +VLDEADK+L F +
Sbjct: 153 GQSGREQADALENGVQIVVGTPGRLADFVGRNRIDLSAVKTVVLDEADKMLDMGFADEIK 212
Query: 689 MVISRLPKERQILLFSATFP 748
V+ LP RQ +LFSATFP
Sbjct: 213 TVMRDLPGSRQTVLFSATFP 232
>UniRef50_Q1VL45 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: DEAD/DEAH box
helicase-like protein - Psychroflexus torquis ATCC
700755
Length = 255
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT+L + + V +I+ TPGR++D+ ++ ++ +ML LDEAD++L F
Sbjct: 107 YGGTDLEKQAKTLAKGVDIIVGTPGRVMDMNERGHIDLNSPKMLCLDEADRMLDMGFFPD 166
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ R+ +Q LLFSATFP
Sbjct: 167 IMWIVERMTSRQQTLLFSATFP 188
Score = 54.8 bits (126), Expect = 2e-06
Identities = 23/60 (38%), Positives = 39/60 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ + L L G+ + GWE + +Q ++PIA G DV+ +A+ G+GKT A+ +P+LE+
Sbjct: 7 FDSWELPDALRTGLAQLGWEFATQVQRDTVPIARQGTDVIGQARTGSGKTAAFGLPILER 66
>UniRef50_Q1Q4V2 Cluster: Similar to ATP-independent RNA helicase
DbpA; n=1; Candidatus Kuenenia stuttgartiensis|Rep:
Similar to ATP-independent RNA helicase DbpA -
Candidatus Kuenenia stuttgartiensis
Length = 407
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/82 (37%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I R+ Q V +++ATPGR+IDL+ + + + + ++LDEAD+LL F
Sbjct: 104 YGGFDRAAQIARVKQTVHILVATPGRLIDLLYEGILSFARIKCVILDEADELLKVGFLED 163
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S + + Q LLFSAT P
Sbjct: 164 IEFILSCIRHKHQTLLFSATMP 185
Score = 53.2 bits (122), Expect = 7e-06
Identities = 23/62 (37%), Positives = 41/62 (66%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + L ++L + + G+ + +PIQEA+ PI +G D+ A A+ G+GKT A IP+++
Sbjct: 2 KFSDLELSADILKALDKMGYNEMTPIQEATYPIIFAGHDLCALAETGSGKTAACAIPLIQ 61
Query: 207 QV 212
+V
Sbjct: 62 KV 63
Score = 39.1 bits (87), Expect = 0.11
Identities = 17/36 (47%), Positives = 24/36 (66%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDI 488
VDP D IQ L++VPTREL +Q + ++A TD+
Sbjct: 63 VDPSLDAIQGLVIVPTRELCMQYVEEIRKIAAKTDV 98
>UniRef50_Q1I3W1 Cluster: ATP-dependent RNA helicase RhlE, DEAD box
family; n=21; Pseudomonadaceae|Rep: ATP-dependent RNA
helicase RhlE, DEAD box family - Pseudomonas entomophila
(strain L48)
Length = 634
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/81 (38%), Positives = 50/81 (61%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + + + + V V++A PGR++DL + + + +LVLDEAD++L F
Sbjct: 114 FGGVGMNPQVQAMAKGVDVLVACPGRLLDLAGQGSVDLSRVEILVLDEADRMLDMGFIHD 173
Query: 683 LDMVISRLPKERQILLFSATF 745
+ V++RLP +RQ LLFSATF
Sbjct: 174 VKKVLARLPAKRQNLLFSATF 194
Score = 58.4 bits (135), Expect = 2e-07
Identities = 23/61 (37%), Positives = 39/61 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L L+ I G+ +P+P+Q+ +IP L G+D++ A+ GTGKTG + +P+LE+
Sbjct: 3 FASLGLSEALVRAIEAAGYTQPTPVQQRAIPAVLQGRDLMVAAQTGTGKTGGFALPILER 62
Query: 210 V 212
+
Sbjct: 63 L 63
>UniRef50_A4EAF2 Cluster: Putative uncharacterized protein; n=1;
Collinsella aerofaciens ATCC 25986|Rep: Putative
uncharacterized protein - Collinsella aerofaciens ATCC
25986
Length = 749
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/78 (35%), Positives = 48/78 (61%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + + +++ATPGR++DL+++ +D+ ++LVLDEAD++L F +
Sbjct: 175 GVSYKPQTAALKYGCDILVATPGRLVDLIEQGACHLDEVKVLVLDEADRMLDMGFLPAVR 234
Query: 689 MVISRLPKERQILLFSAT 742
++ P ERQ LLFSAT
Sbjct: 235 RIVRETPAERQTLLFSAT 252
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/61 (42%), Positives = 39/61 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+E L E+L I G+ P+P+Q SIP+ L G+D+LA A+ GTGKT A+ +P +
Sbjct: 48 FDELGLSDEMLRAIENLGYTAPTPVQAGSIPVVLEGRDLLAAAQTGTGKTAAFLLPTMNN 107
Query: 210 V 212
+
Sbjct: 108 L 108
>UniRef50_A3I1F5 Cluster: DEAD/DEAH box helicase-like protein; n=1;
Algoriphagus sp. PR1|Rep: DEAD/DEAH box helicase-like
protein - Algoriphagus sp. PR1
Length = 399
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/86 (34%), Positives = 54/86 (62%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
HS + GTN+ D+ + + + VI+ TPGR++DL ++++ K++Q + LVLDE D++L
Sbjct: 153 HSAT-FIGGTNINTDMKVLSRKLHVIVGTPGRLLDLTNRKLLKLNQVKTLVLDEFDRMLD 211
Query: 665 QDFKGMLDMVISRLPKERQILLFSAT 742
F + ++ + + Q +LFSAT
Sbjct: 212 MGFVNDVKKLVGGMTQREQTMLFSAT 237
Score = 54.0 bits (124), Expect = 4e-06
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L ++ + EKG+E + IQE SI L G+D+L + G+GKTGA+ IP++E
Sbjct: 57 FASLSLDSVMMRNLSEKGYENMTNIQEQSIEALLEGRDLLGISNTGSGKTGAFLIPIIEH 116
Query: 210 VI 215
+
Sbjct: 117 AL 118
>UniRef50_Q019E9 Cluster: ATP-dependent RNA helicase; n=2;
Ostreococcus|Rep: ATP-dependent RNA helicase -
Ostreococcus tauri
Length = 683
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/98 (31%), Positives = 58/98 (59%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+++ T T +C Y GT + ++ + V +++ TPGR++DLM+++ + + +
Sbjct: 120 EIFITAPTLDTAC--VYGGTPIGQQESKLRRGVDIVVGTPGRIMDLMNRRALDLSEIEFV 177
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDEAD++L+ F+ ++ ++ P RQ LFSAT P
Sbjct: 178 VLDEADQMLNVGFEEDVEAILHDCPAGRQTFLFSATMP 215
Score = 52.0 bits (119), Expect = 2e-05
Identities = 23/70 (32%), Positives = 44/70 (62%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
+AD + + F + + + ++G + PIQ+A + A+ G+DV+ RA+ GTGKT A
Sbjct: 19 KADADPADVDNFGMSETTVQALRKRGVDALFPIQQAVLRPAMDGQDVVGRARTGTGKTLA 78
Query: 186 YCIPVLEQVI 215
+ +PV+E+++
Sbjct: 79 FSLPVIEKLL 88
>UniRef50_Q54VF1 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 685
Score = 66.5 bits (155), Expect = 7e-10
Identities = 27/62 (43%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE L +L + + G++ PS +Q SIP++L GKD+LA+A+ G+GKT AY IP++++
Sbjct: 25 FESMGLDNRILRALKKMGFQNPSLVQSKSIPLSLQGKDILAKARTGSGKTAAYSIPIIQK 84
Query: 210 VI 215
V+
Sbjct: 85 VL 86
Score = 41.1 bits (92), Expect = 0.028
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
VI++TP R++ L +K + +LV+DEAD +L+ + ++++ S LPK Q L
Sbjct: 151 VIVSTPTRLVQHLENKTIQLQSTLDILVIDEADLVLNYGHQNDINIIKSFLPKVCQCFLM 210
Query: 734 SAT 742
SAT
Sbjct: 211 SAT 213
>UniRef50_A7U5W6 Cluster: DEAD-box helicase 1; n=8;
Aconoidasida|Rep: DEAD-box helicase 1 - Plasmodium
falciparum
Length = 457
Score = 66.5 bits (155), Expect = 7e-10
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F LK ELL I E G+E PS +Q+ +IP A++G D+L +AK+G GKT + + +L+Q
Sbjct: 57 FKDFFLKPELLRAISESGFEHPSEVQQETIPAAITGTDILCQAKSGMGKTAVFVLSILQQ 116
Query: 210 V 212
+
Sbjct: 117 L 117
Score = 47.2 bits (107), Expect = 4e-04
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQ-NV-QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
C Y G ++ I + N+ +II TPGR++ L+ ++ D+ + VLDE DK L
Sbjct: 175 CEVVYGGISMNKHIKLFKEDNIPHIIIGTPGRILALIREKYLITDKIQHFVLDECDKCLE 234
Query: 665 Q-DFKGMLDMVISRLPKERQILLFSAT 742
+ D + + + P ++Q++ FSAT
Sbjct: 235 KLDMRSDVQKIFISTPLKKQVMFFSAT 261
>UniRef50_A2DH37 Cluster: DEAD/DEAH box helicase family protein;
n=2; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 541
Score = 66.5 bits (155), Expect = 7e-10
Identities = 31/86 (36%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G + + I + + + ++IATPGR+ID++ + + + R L+LDEAD++L F+
Sbjct: 226 FGGAPITEQIRNLSRGIDIVIATPGRLIDILKQHCITLSEVRFLILDEADRMLDMGFEPQ 285
Query: 683 LDMVIS--RLP--KERQILLFSATFP 748
+ VI+ +P +RQ +LFSATFP
Sbjct: 286 MQEVINGWDMPPADDRQTMLFSATFP 311
Score = 56.4 bits (130), Expect = 7e-07
Identities = 21/57 (36%), Positives = 40/57 (70%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
++ E+L + G++ P+P+Q SIP L+G+D++ ++ G+GKT A+ +PV+ Q+I
Sbjct: 128 IRNEVLRNVAHNGYKVPTPVQRYSIPYILNGEDLIVTSQTGSGKTAAFMLPVITQLI 184
>UniRef50_Q8SSG7 Cluster: PUTATIVE ATP-DEPENDENT RNA HELICASE; n=1;
Encephalitozoon cuniculi|Rep: PUTATIVE ATP-DEPENDENT RNA
HELICASE - Encephalitozoon cuniculi
Length = 503
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/68 (44%), Positives = 44/68 (64%)
Frame = +2
Query: 542 YQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQ 721
Y V +++ATPGR+IDL+ ++ + + RM VLDEADKLL F+ + + +PK Q
Sbjct: 208 YSGVDIVVATPGRLIDLLHRKKVDLSEIRMFVLDEADKLLDMGFEIPIREIHGFVPKNTQ 267
Query: 722 ILLFSATF 745
LFSAT+
Sbjct: 268 TCLFSATY 275
Score = 42.3 bits (95), Expect = 0.012
Identities = 20/62 (32%), Positives = 36/62 (58%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F++ C LL+ K + P+ IQ+ IP + G++++ RA G GKT + IP++
Sbjct: 99 SSFKDLC--SPLLIKALGKEYSAPTIIQKYCIPSLVDGRNLICRAPTGMGKTMCFLIPII 156
Query: 204 EQ 209
E+
Sbjct: 157 ER 158
>UniRef50_Q8SR49 Cluster: ATP-dependent rRNA helicase SPB4; n=1;
Encephalitozoon cuniculi|Rep: ATP-dependent rRNA
helicase SPB4 - Encephalitozoon cuniculi
Length = 463
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/84 (35%), Positives = 50/84 (59%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQD 670
C + G ++ +D R+ + + + TPGR+++++ K+ K LVLDEADKLL
Sbjct: 103 CECFIGGMSIEEDYKRMKEEFSIAVGTPGRLLEIVGKETKKFSSLSHLVLDEADKLLGFG 162
Query: 671 FKGMLDMVISRLPKERQILLFSAT 742
F+ L ++++LP+ R LFSAT
Sbjct: 163 FEEKLMQLLAKLPRNRVTGLFSAT 186
Score = 44.4 bits (100), Expect = 0.003
Identities = 22/57 (38%), Positives = 32/57 (56%)
Frame = +3
Query: 33 EEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
E+ + L I E G+ K + +Q IP L GKDV+ ++ GTGKT A+ P+L
Sbjct: 7 EDVAMNGRLKKEIEENGFGKMTEVQLKCIPEVLKGKDVVVQSPTGTGKTMAFLAPIL 63
>UniRef50_Q9C551 Cluster: DEAD-box ATP-dependent RNA helicase 5;
n=4; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 5 - Arabidopsis thaliana (Mouse-ear cress)
Length = 537
Score = 66.5 bits (155), Expect = 7e-10
Identities = 30/82 (36%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G++ I I V ++I TPGR+ DL++ V ++ +VLDEAD++L F+
Sbjct: 226 YGGSSKGPQISAIRSGVDIVIGTPGRLRDLIESNVLRLSDVSFVVLDEADRMLDMGFEEP 285
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++S K RQ+++FSAT+P
Sbjct: 286 VRFILSNTNKVRQMVMFSATWP 307
Score = 48.4 bits (110), Expect = 2e-04
Identities = 22/46 (47%), Positives = 31/46 (67%)
Frame = +3
Query: 78 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
K +EKPSPIQ + P L G+D++ AK G+GKT A+ IP + V+
Sbjct: 132 KTFEKPSPIQSHTWPFLLDGRDLIGIAKTGSGKTLAFGIPAIMHVL 177
>UniRef50_Q6BML1 Cluster: Pre-mRNA-processing ATP-dependent RNA
helicase PRP5; n=4; Saccharomycetales|Rep:
Pre-mRNA-processing ATP-dependent RNA helicase PRP5 -
Debaryomyces hansenii (Yeast) (Torulaspora hansenii)
Length = 913
Score = 66.5 bits (155), Expect = 7e-10
Identities = 35/97 (36%), Positives = 57/97 (58%), Gaps = 3/97 (3%)
Frame = +2
Query: 467 TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLM---DKQVAKMDQCRMLV 637
T K + SC + G+++ I + + Q+I+ TPGR+IDL+ +V + + LV
Sbjct: 414 TKKLNISSCC-CFGGSSIESQIAELKKGAQIIVGTPGRIIDLLAANSGRVTNLQRVTYLV 472
Query: 638 LDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
LDEAD++ F+ + V +R+ +RQ +LFSATFP
Sbjct: 473 LDEADRMFDMGFEPQVTKVFTRVRPDRQTVLFSATFP 509
Score = 44.4 bits (100), Expect = 0.003
Identities = 20/53 (37%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Frame = +3
Query: 60 LMGIFEK--GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+M I E + PS IQ +IP +SG+D++ AK G+GKT ++ +P+L +
Sbjct: 327 IMSIIEGRLNYSSPSSIQAQAIPAIMSGRDIIGVAKTGSGKTLSFVLPLLRHI 379
>UniRef50_Q6YPL1 Cluster: Superfamily II DNA and RNA helicase; n=3;
Candidatus Phytoplasma|Rep: Superfamily II DNA and RNA
helicase - Onion yellows phytoplasma
Length = 552
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + +IIATPGR ID +++ + ++L LDEAD++L F+
Sbjct: 107 YGGESYTKQFRALEAKPHLIIATPGRAIDHLERGKIDLSALKILTLDEADEMLKMGFQEA 166
Query: 683 LDMVISRLPKERQILLFSATFP 748
L+ ++ ++P+ERQ +LFSAT P
Sbjct: 167 LETILKKIPEERQTVLFSATLP 188
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/61 (34%), Positives = 36/61 (59%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE+ + + + E + +PIQ IP + G DV+ +A+ GTGKT A+ IP++E+
Sbjct: 5 FEQLPILEQTKKALKELNFIDATPIQALVIPEIIKGHDVIGQAQTGTGKTFAFGIPIIEK 64
Query: 210 V 212
+
Sbjct: 65 I 65
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAK-HTDIRVMVTTGAQTF 521
++PK Q+LI+ PTREL LQ + +L + + +IR+ V G +++
Sbjct: 65 IEPKIQKTQSLILCPTRELTLQVYEELKKLLRFYQEIRIAVVYGGESY 112
>UniRef50_Q6A841 Cluster: Putative ATP-dependent RNA helicase; n=1;
Propionibacterium acnes|Rep: Putative ATP-dependent RNA
helicase - Propionibacterium acnes
Length = 561
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/82 (37%), Positives = 47/82 (57%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G I + V V++ TPGR++DL ++ + R++VLDEAD++L F
Sbjct: 166 YGGVGYESQIDALKAGVDVVVGTPGRLLDLSQRKDLDLSHVRIVVLDEADEMLDLGFLPD 225
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ +I R P RQ +LFSAT P
Sbjct: 226 VENLIGRTPASRQTMLFSATMP 247
Score = 47.6 bits (108), Expect = 3e-04
Identities = 22/61 (36%), Positives = 37/61 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + ++ ++ + G P PIQ SIPIA+ G D++ +A+ GTGKT A+ I +L +
Sbjct: 55 FADLGVREDICQALEGVGIVSPFPIQAMSIPIAVEGTDLIGQARTGTGKTLAFGITILLR 114
Query: 210 V 212
+
Sbjct: 115 I 115
>UniRef50_Q62J95 Cluster: ATP-dependent RNA helicase RhlE, putative;
n=58; Proteobacteria|Rep: ATP-dependent RNA helicase
RhlE, putative - Burkholderia mallei (Pseudomonas
mallei)
Length = 516
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/78 (35%), Positives = 50/78 (64%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G +M + +N ++++ATPGR++D +++ + + +MLVLDEAD++L F +D
Sbjct: 175 GVAYGQQLMLLAKNPEILVATPGRLLDHLERGRIDLSELKMLVLDEADRMLDMGFIDDID 234
Query: 689 MVISRLPKERQILLFSAT 742
+++ P RQ +LFSAT
Sbjct: 235 TIVAATPATRQTMLFSAT 252
Score = 52.8 bits (121), Expect = 9e-06
Identities = 20/60 (33%), Positives = 38/60 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L E++ + G+ KP+P+Q+ +IP ++G+D+L + G+GKT A+ +P +E+
Sbjct: 45 FASLGLSPEIVSALQAAGYVKPTPVQQRAIPAGIAGRDLLVSSPTGSGKTAAFMLPAIER 104
>UniRef50_Q480Z7 Cluster: ATP-dependent RNA helicase, DEAD box
family; n=2; Alteromonadales|Rep: ATP-dependent RNA
helicase, DEAD box family - Colwellia psychrerythraea
(strain 34H / ATCC BAA-681) (Vibriopsychroerythus)
Length = 399
Score = 66.1 bits (154), Expect = 9e-10
Identities = 32/82 (39%), Positives = 47/82 (57%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + I + +++ATPGR++DL++ + VLDEAD +L F
Sbjct: 110 YGGVGRQAQVDSIELGLDILVATPGRLLDLIETGDINFKALEVFVLDEADTMLDMGFFKD 169
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ +IS+LPK RQ LLFSAT P
Sbjct: 170 VQSIISKLPKSRQTLLFSATMP 191
Score = 57.2 bits (132), Expect = 4e-07
Identities = 23/62 (37%), Positives = 42/62 (67%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+EF+ F L ++ + KG+++P+PIQ+ IP ++G D+L A+ GTGKT A+ +P++
Sbjct: 2 SEFKAFSLLESIIDRVNLKGYKQPTPIQKECIPALINGNDLLGIAQTGTGKTAAFSLPII 61
Query: 204 EQ 209
+
Sbjct: 62 NK 63
>UniRef50_Q3SF48 Cluster: DEAD/DEAH box helicase; n=6; cellular
organisms|Rep: DEAD/DEAH box helicase - Thiobacillus
denitrificans (strain ATCC 25259)
Length = 533
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/71 (43%), Positives = 46/71 (64%)
Frame = +2
Query: 530 IMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLP 709
+ R+ Q V V++ATPGR+ID +++ + +LVLDEAD++L F + + +R P
Sbjct: 118 LKRLSQPVDVVVATPGRLIDHLERGKIDFSRLEVLVLDEADRMLDMGFVDDIKAIAARCP 177
Query: 710 KERQILLFSAT 742
ERQ LLFSAT
Sbjct: 178 AERQTLLFSAT 188
Score = 53.2 bits (122), Expect = 7e-06
Identities = 22/62 (35%), Positives = 39/62 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L +L + G+E +P+Q+ +IP ALSG D+L + G+GKT A+ +P +++
Sbjct: 3 FSELGLDPLILKSVLAAGYENATPVQQQAIPAALSGGDLLVSSHTGSGKTAAFLLPSIQR 62
Query: 210 VI 215
++
Sbjct: 63 LL 64
>UniRef50_A2YDM1 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 925
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 4/84 (4%)
Frame = +2
Query: 509 GTNLRDDIMRIYQN-VQVIIATPGRMIDLMDKQ---VAKMDQCRMLVLDEADKLLSQDFK 676
GT + + R++ N Q+++ATPGR+ D M+ ++ ++L+LDEAD+LL F+
Sbjct: 569 GTRMALEQKRMHTNPCQILVATPGRLKDHMENTPGFATRLMGVKVLILDEADRLLDMGFR 628
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
++ +++ LPK+RQ LLFSAT P
Sbjct: 629 TDIERIVAALPKQRQTLLFSATVP 652
Score = 39.5 bits (88), Expect = 0.086
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = +3
Query: 135 GKDVLARAKNGTGKTGAYCIPVLEQV 212
GKDVLA+AK GTGKT A+ +P +E V
Sbjct: 492 GKDVLAKAKTGTGKTVAFLLPAIEVV 517
>UniRef50_Q388E8 Cluster: ATP-dependent DEAD/H RNA helicase,
putative; n=3; Trypanosoma|Rep: ATP-dependent DEAD/H RNA
helicase, putative - Trypanosoma brucei
Length = 660
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/92 (33%), Positives = 56/92 (60%), Gaps = 6/92 (6%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQD 670
C Y G + R + + + ++++ATPGR++D+ + + + R L+LDEAD++L
Sbjct: 267 CVVVYGGADPRHQVHELSRGCKLLVATPGRLMDMFSRGYVRFSEIRFLILDEADRMLDMG 326
Query: 671 FKGMLDMVI----SRLPK--ERQILLFSATFP 748
F+ + M++ S +P+ +RQ LL+SATFP
Sbjct: 327 FEPQIRMIVQGPDSDMPRAGQRQTLLYSATFP 358
Score = 54.4 bits (125), Expect = 3e-06
Identities = 23/62 (37%), Positives = 39/62 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E + LL + G+ KP+P+Q IP AL+ +D++A A+ G+GKT +Y IP + +
Sbjct: 159 FSEMNMVPVLLENVKRCGYTKPTPVQSLGIPTALNHRDLMACAQTGSGKTASYLIPAINE 218
Query: 210 VI 215
++
Sbjct: 219 IL 220
>UniRef50_A5K071 Cluster: ATP-dependent RNA helicase, putative; n=6;
Plasmodium|Rep: ATP-dependent RNA helicase, putative -
Plasmodium vivax
Length = 717
Score = 66.1 bits (154), Expect = 9e-10
Identities = 27/82 (32%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G I + + +++ATPGR++DL++ V + +C +V+DEAD+LL F+
Sbjct: 436 YGGVPKYTQISNLKKGADIVVATPGRLLDLLESGVIHLLRCIYVVIDEADRLLDMGFEKQ 495
Query: 683 LDMVISRLPKERQILLFSATFP 748
L +++++ + +Q+L F+AT+P
Sbjct: 496 LKKIMTQVNRNKQLLFFTATWP 517
Score = 46.4 bits (105), Expect = 7e-04
Identities = 19/44 (43%), Positives = 33/44 (75%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
+++P+ IQ+ + PIALSGKD++ A+ G+GKT A+ +P L ++
Sbjct: 297 FKEPTAIQKVTWPIALSGKDLIGVAETGSGKTLAFALPALMHIL 340
>UniRef50_A1IIT5 Cluster: RNA helicase; n=1; Neobenedenia
girellae|Rep: RNA helicase - Neobenedenia girellae
Length = 634
Score = 66.1 bits (154), Expect = 9e-10
Identities = 31/83 (37%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N+R D+M++ V V++ATPGR++ + + + C +VLDEAD+LL + F+G +
Sbjct: 323 GVNVRHDLMQLRSGVSVLVATPGRLLHFIRSGLISLSMCNFIVLDEADRLLDEGFEGEMR 382
Query: 689 MVISR--LP--KERQILLFSATF 745
+ LP + RQ+++ SATF
Sbjct: 383 EFLEHEDLPPRETRQVVMLSATF 405
Score = 49.2 bits (112), Expect = 1e-04
Identities = 18/41 (43%), Positives = 31/41 (75%)
Frame = +3
Query: 93 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
P+P+Q +P+ L+G+D LA A+ G+GKT A+ +P+L+ V+
Sbjct: 229 PTPVQRFLLPVLLAGRDALATAQTGSGKTAAFMLPILKTVL 269
>UniRef50_A0CUL6 Cluster: Chromosome undetermined scaffold_28, whole
genome shotgun sequence; n=4; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_28,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 604
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/65 (43%), Positives = 45/65 (69%)
Frame = +2
Query: 554 QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
Q++IA PGR+IDL+D+ + Q LVLDEAD++L F+ + ++ ++ +RQ +LF
Sbjct: 256 QILIACPGRLIDLLDQGCTTLKQVSFLVLDEADRMLDMGFEPQIRKIVDQIRPQRQTMLF 315
Query: 734 SATFP 748
SAT+P
Sbjct: 316 SATWP 320
Score = 41.5 bits (93), Expect = 0.021
Identities = 20/63 (31%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Frame = +3
Query: 30 FEEF-CLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
FE+ C + L+ + + G++ P+ IQ IAL+G D++ A+ G+GKT A+ +P +
Sbjct: 135 FEDVQCFPQMLMDLLLKAGFKGPTAIQAQGWSIALTGHDLIGIAQTGSGKTLAFLLPAIV 194
Query: 207 QVI 215
++
Sbjct: 195 HIL 197
>UniRef50_Q0W8H7 Cluster: ATP-dependent RNA helicase; n=1;
uncultured methanogenic archaeon RC-I|Rep: ATP-dependent
RNA helicase - Uncultured methanogenic archaeon RC-I
Length = 497
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + R + + + +++ TPGR+++ M ++ + R+ VLDEADK+L F
Sbjct: 105 YGGQDFRSQVKALEELPHIVVGTPGRLLEHMRREYVRTSDIRIAVLDEADKMLDMGFIDE 164
Query: 683 LDMVISRLPKERQILLFSAT 742
+ ++ +LP+ RQ LLFSAT
Sbjct: 165 AEKILKKLPERRQTLLFSAT 184
Score = 63.7 bits (148), Expect = 5e-09
Identities = 26/62 (41%), Positives = 44/62 (70%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L ++ + E G+E+ +PIQE +IP+A+ GKD++ +A+ GTGKT A+ IP++E
Sbjct: 3 KFTELNLTPSIVRAVHEMGFEEATPIQEQAIPLAMEGKDLIGQARTGTGKTAAFGIPMVE 62
Query: 207 QV 212
+
Sbjct: 63 AI 64
Score = 37.9 bits (84), Expect = 0.26
Identities = 18/47 (38%), Positives = 26/47 (55%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTF 521
+ P +Q L+VVPTRELA+Q ++ + K IR + G Q F
Sbjct: 64 IRPTSKGVQGLVVVPTRELAVQVAEELTRIGKVRGIRSVAIYGGQDF 110
>UniRef50_Q8GY84 Cluster: DEAD-box ATP-dependent RNA helicase 10;
n=34; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
10 - Arabidopsis thaliana (Mouse-ear cress)
Length = 456
Score = 66.1 bits (154), Expect = 9e-10
Identities = 28/65 (43%), Positives = 43/65 (66%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ EL+ GW+ PS IQ ++P AL GKDV+ A+ G+GKTGA+ IP+L+
Sbjct: 11 FAELGVREELVKACERLGWKNPSKIQAEALPFALEGKDVIGLAQTGSGKTGAFAIPILQA 70
Query: 210 VICYM 224
++ Y+
Sbjct: 71 LLEYV 75
Score = 61.3 bits (142), Expect = 2e-08
Identities = 30/63 (47%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMIDLM-DKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
VI+ATPGR+ D M D + + + LVLDEAD+LL++DF+ L+ ++ +P ER+ LF
Sbjct: 142 VIVATPGRLWDHMSDTKGFSLKSLKYLVLDEADRLLNEDFEKSLNQILEEIPLERKTFLF 201
Query: 734 SAT 742
SAT
Sbjct: 202 SAT 204
>UniRef50_Q8TDD1 Cluster: ATP-dependent RNA helicase DDX54; n=45;
Eukaryota|Rep: ATP-dependent RNA helicase DDX54 - Homo
sapiens (Human)
Length = 881
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/80 (37%), Positives = 45/80 (56%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + D +++N +IIATPGR++ + + K+ +V DEAD+L F L
Sbjct: 203 GDRMEDQFAALHENPDIIIATPGRLVHVAVEMSLKLQSVEYVVFDEADRLFEMGFAEQLQ 262
Query: 689 MVISRLPKERQILLFSATFP 748
+I+RLP Q +LFSAT P
Sbjct: 263 EIIARLPGGHQTVLFSATLP 282
Score = 61.7 bits (143), Expect = 2e-08
Identities = 25/61 (40%), Positives = 41/61 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ L + GI +KG++ P+PIQ +IP+ L GKDV+A A+ G+GKT + +P+ E+
Sbjct: 98 FQSMGLSYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFER 157
Query: 210 V 212
+
Sbjct: 158 L 158
Score = 36.3 bits (80), Expect = 0.80
Identities = 18/40 (45%), Positives = 24/40 (60%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ALI+ PTRELALQT + EL K T ++ + G E
Sbjct: 168 RALILSPTRELALQTLKFTKELGKFTGLKTALILGGDRME 207
>UniRef50_P21693 Cluster: ATP-independent RNA helicase dbpA; n=195;
cellular organisms|Rep: ATP-independent RNA helicase
dbpA - Escherichia coli (strain K12)
Length = 457
Score = 66.1 bits (154), Expect = 9e-10
Identities = 30/64 (46%), Positives = 41/64 (64%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
+I+ATPGR++D + K +D LV+DEAD++L F +D VI P RQ LLFS
Sbjct: 125 IIVATPGRLLDHLQKGTVSLDALNTLVMDEADRMLDMGFSDAIDDVIRFAPASRQTLLFS 184
Query: 737 ATFP 748
AT+P
Sbjct: 185 ATWP 188
Score = 48.4 bits (110), Expect = 2e-04
Identities = 21/51 (41%), Positives = 35/51 (68%)
Frame = +3
Query: 60 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L + E G+ +P+Q A++P L+GKDV +AK G+GKT A+ + +L+Q+
Sbjct: 15 LTNLNELGYLTMTPVQAAALPAILAGKDVRVQAKTGSGKTAAFGLGLLQQI 65
>UniRef50_Q9UTP9 Cluster: ATP-dependent RNA helicase dbp4; n=1;
Schizosaccharomyces pombe|Rep: ATP-dependent RNA
helicase dbp4 - Schizosaccharomyces pombe (Fission
yeast)
Length = 735
Score = 66.1 bits (154), Expect = 9e-10
Identities = 33/92 (35%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
G+ H S G N +++ R+ + +++ TPGR++ +D+ V +ML+LDE
Sbjct: 135 GRLHSFSAGLIIGGNNYKEEKERL-SRMNILVCTPGRLLQHIDQAVNFDTSGLQMLILDE 193
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F+ LD ++S LP RQ +LFSAT
Sbjct: 194 ADRILDMGFRTTLDAIVSSLPVHRQTMLFSAT 225
Score = 43.6 bits (98), Expect = 0.005
Identities = 18/37 (48%), Positives = 27/37 (72%)
Frame = +3
Query: 102 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
IQ+ IP AL G+D+L AK G+GKT A+ +P++E +
Sbjct: 65 IQKQCIPSALKGRDILGAAKTGSGKTLAFIVPLIENL 101
>UniRef50_UPI000051A2EE Cluster: PREDICTED: similar to Helicase
CG1666-PA isoform 1; n=1; Apis mellifera|Rep: PREDICTED:
similar to Helicase CG1666-PA isoform 1 - Apis mellifera
Length = 547
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/68 (38%), Positives = 46/68 (67%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
+T+ F E L +L + + GW +P+ IQE +IP+ + GKD+L RA+ G+GKT A+
Sbjct: 8 ETKAKSFYELELDDRILKAVAKLGWLEPTLIQEKTIPLMIEGKDILIRARTGSGKTAAFT 67
Query: 192 IPVLEQVI 215
IP++++++
Sbjct: 68 IPLIQKIL 75
Score = 35.1 bits (77), Expect = 1.8
Identities = 17/63 (26%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQC-RMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
++++TP +++ + + K+ Q L++DEAD + S ++ + +++ LP Q +L
Sbjct: 140 IVVSTPSKLLQHLKAKNMKLKQSLETLIIDEADLIFSFGYENEIKDILNYLPILYQAVLA 199
Query: 734 SAT 742
SAT
Sbjct: 200 SAT 202
>UniRef50_Q5QY63 Cluster: ATP-dependent RNA helicase; n=3;
Alteromonadales|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 594
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + Q +++ TPGR+IDL++K V ++D ++ VLDEAD++L+ F
Sbjct: 112 YGGAPFGPQVKALKQGTAIVVGTPGRLIDLLNKNVLQLDGLKVGVLDEADEMLNMGFIED 171
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ +P Q LFSAT P
Sbjct: 172 IETILKAVPNTAQRALFSATMP 193
Score = 49.2 bits (112), Expect = 1e-04
Identities = 24/64 (37%), Positives = 36/64 (56%)
Frame = +3
Query: 21 GNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 200
G F + L +L + + P+PIQ +IP L G+DVL A+ GTGKT A+ +P
Sbjct: 7 GLSFNDMALPSAVLEQLNAMQFLTPTPIQLQAIPALLEGQDVLGEAQTGTGKTAAFGLPA 66
Query: 201 LEQV 212
L ++
Sbjct: 67 LAKI 70
>UniRef50_Q5QWG1 Cluster: ATP-dependent RNA helicase; n=1;
Idiomarina loihiensis|Rep: ATP-dependent RNA helicase -
Idiomarina loihiensis
Length = 474
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/64 (42%), Positives = 44/64 (68%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
V++ TPGR++D ++++ + LVLDEAD++L F+ L+ ++ +PK RQ LLFS
Sbjct: 143 VLVGTPGRVLDHLEQRNVDLSMLTTLVLDEADRMLEMGFQDSLNAIVKHIPKTRQTLLFS 202
Query: 737 ATFP 748
AT+P
Sbjct: 203 ATYP 206
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/61 (32%), Positives = 37/61 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L LL + E G+++ +P+Q S+P+ L+ D + RA G+GKT A+ + +L +
Sbjct: 23 FNQLNLPPALLTRLDEIGYQQMTPVQSLSLPVILNNTDAVVRADTGSGKTTAFALTLLAK 82
Query: 210 V 212
+
Sbjct: 83 L 83
>UniRef50_Q4IZ16 Cluster: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain; n=18;
Pseudomonadaceae|Rep: DEAD/DEAH box helicase:Helicase,
C-terminal:DbpA RNA binding domain - Azotobacter
vinelandii AvOP
Length = 575
Score = 65.7 bits (153), Expect = 1e-09
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + + Q Q+++ATPGR+ D + + + + LVLDEAD++L F
Sbjct: 127 YGGAPMGPQLKALRQGAQILVATPGRLCDHLRRDEQLLSTVKHLVLDEADEMLKLGFMED 186
Query: 683 LDMVISRLPKERQILLFSATFP 748
L+++ + LP+ RQ +LFSAT P
Sbjct: 187 LEVIFAALPESRQTVLFSATLP 208
Score = 57.6 bits (133), Expect = 3e-07
Identities = 23/52 (44%), Positives = 38/52 (73%)
Frame = +3
Query: 57 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+L I G+E+PSPIQ +IP+ L+G D++ +A+ GTGKT A+ +P+L ++
Sbjct: 34 VLAAITAVGYEEPSPIQAQAIPVILAGHDMIGQAQTGTGKTAAFALPMLSRI 85
>UniRef50_Q1FMF9 Cluster: Helicase-like:DbpA, RNA-binding:DEAD/DEAH
box helicase-like; n=1; Clostridium phytofermentans
ISDg|Rep: Helicase-like:DbpA, RNA-binding:DEAD/DEAH box
helicase-like - Clostridium phytofermentans ISDg
Length = 483
Score = 65.7 bits (153), Expect = 1e-09
Identities = 26/64 (40%), Positives = 45/64 (70%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N+F ++ L E++ + + +P+PIQE IP+AL GKD++A++K G+GKT A+ IP+
Sbjct: 4 NKFTQYKLCEEIIQALSMLHYIEPTPIQEKVIPLALEGKDIIAKSKTGSGKTAAFAIPIC 63
Query: 204 EQVI 215
E ++
Sbjct: 64 ESIV 67
Score = 52.0 bits (119), Expect = 2e-05
Identities = 25/96 (26%), Positives = 48/96 (50%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
+++ G+ R + G + + Q +++ TPGR++D + K + +
Sbjct: 91 EIFNVGRMKRVKVPVVFGGFPFDKQALTLKQKSHIVVGTPGRVLDHCETGTLKCSNVKYV 150
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
++DEAD +L F + ++S LP+ I+LFSAT
Sbjct: 151 IIDEADLMLDMGFLDDVKRILSYLPENITIMLFSAT 186
>UniRef50_A7HDE9 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Anaeromyxobacter sp. Fw109-5|Rep: DEAD/DEAH box
helicase domain protein - Anaeromyxobacter sp. Fw109-5
Length = 680
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/82 (34%), Positives = 51/82 (62%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + + ++ ++I+ TPGR+ D + ++ K+D+ + LDEAD++L+ F
Sbjct: 123 YGGASMGEQLQKLEAGAEIIVGTPGRIYDHIRRRTLKLDETMVCCLDEADEMLNMGFFEE 182
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++ LPK+ Q LLFSAT P
Sbjct: 183 VTRILDNLPKDCQQLLFSATVP 204
Score = 61.7 bits (143), Expect = 2e-08
Identities = 26/61 (42%), Positives = 40/61 (65%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+E L + I E G+E+P+P+Q ++ GKDV+ R+K GTGKT A+ IP+LE+
Sbjct: 22 FDELGLSEPVRRAIAEHGYERPTPVQVSTFRPVRDGKDVIVRSKTGTGKTAAFAIPILER 81
Query: 210 V 212
+
Sbjct: 82 I 82
Score = 37.5 bits (83), Expect = 0.35
Identities = 17/34 (50%), Positives = 23/34 (67%)
Frame = +3
Query: 408 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
AL++ PTRELA+Q +Q LAKH D+ V+ G
Sbjct: 91 ALVMCPTRELAIQVAQEFTALAKHRDLSVVAVYG 124
>UniRef50_A6QC93 Cluster: ATP-independent RNA helicase DbpA; n=1;
Sulfurovum sp. NBC37-1|Rep: ATP-independent RNA helicase
DbpA - Sulfurovum sp. (strain NBC37-1)
Length = 453
Score = 65.7 bits (153), Expect = 1e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G LR + + ++I TPGR+ D + K ++ + LVLDEAD++L F
Sbjct: 107 YGGVPLRAQADSLAKGAHILIGTPGRIQDHLAKGTLTLESIKTLVLDEADRMLDMGFYEE 166
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ + S +PK++Q LLFSATFP
Sbjct: 167 IIKIGSNMPKQKQTLLFSATFP 188
Score = 43.2 bits (97), Expect = 0.007
Identities = 23/51 (45%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Frame = +3
Query: 54 ELLMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
E L+G E G+ + IQ+ SI L GKD+LA++K G+GKT A+ IP +
Sbjct: 12 EALLGTLETLGFTTMTEIQQKSIGPILKGKDILAQSKTGSGKTLAFGIPAV 62
>UniRef50_A5FH33 Cluster: DEAD/DEAH box helicase domain protein;
n=7; Flavobacteria|Rep: DEAD/DEAH box helicase domain
protein - Flavobacterium johnsoniae UW101
Length = 450
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/82 (35%), Positives = 49/82 (59%)
Frame = +2
Query: 497 GYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
G Y G N+ +Y+ V +++ TPGR +DL V + D+ + LV+DE D++L+ F+
Sbjct: 104 GIYGGVNINTQKKAVYEGVDILVGTPGRTMDLALDAVVRFDETQKLVIDEFDEMLNLGFR 163
Query: 677 GMLDMVISRLPKERQILLFSAT 742
L + + + +RQ +LFSAT
Sbjct: 164 PQLTSLFAMMKTKRQNILFSAT 185
Score = 58.4 bits (135), Expect = 2e-07
Identities = 26/59 (44%), Positives = 40/59 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
FE+F L + L + E G+ P+PIQE S + +SG+D++ A+ GTGKT AY +P+L+
Sbjct: 4 FEKFNLPKSLQKAVDELGFVTPTPIQEKSFSVIMSGRDMMGIAQTGTGKTFAYLLPLLK 62
>UniRef50_Q9VRI0 Cluster: CG1666-PA; n=22; Eumetazoa|Rep: CG1666-PA
- Drosophila melanogaster (Fruit fly)
Length = 560
Score = 65.7 bits (153), Expect = 1e-09
Identities = 24/63 (38%), Positives = 44/63 (69%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F E L + +L + + GW++P+ IQ +IP+ L GKDV+ RA+ G+GKT Y +P+++
Sbjct: 10 QFHELELDQRILKAVAQLGWQQPTLIQSTAIPLLLEGKDVVVRARTGSGKTATYALPLIQ 69
Query: 207 QVI 215
+++
Sbjct: 70 KIL 72
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDK-QVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQ 721
++ +++ATP ++ + V + LV+DEAD + + ++ +I LP Q
Sbjct: 134 ESPDIVVATPANLLAYAEAGSVVDLKHVETLVVDEADLVFAYGYEKDFKRLIKHLPPIYQ 193
Query: 722 ILLFSAT 742
+L SAT
Sbjct: 194 AVLVSAT 200
>UniRef50_Q54Y81 Cluster: Putative RNA helicase; n=2; Dictyostelium
discoideum|Rep: Putative RNA helicase - Dictyostelium
discoideum AX4
Length = 834
Score = 65.7 bits (153), Expect = 1e-09
Identities = 31/58 (53%), Positives = 44/58 (75%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
++E L RE+L I + G+EKPSPIQ SIPI+L+G+D+L A+ G+GKT A+ IP+L
Sbjct: 415 WQESNLPREILEAIRQLGYEKPSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPML 472
Score = 56.0 bits (129), Expect = 9e-07
Identities = 22/67 (32%), Positives = 42/67 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ D ++ + ++IIATPGR+ D ++K+ ++QC +VLDEAD ++ F+ +
Sbjct: 526 GQSIEDQAYQVSKGCEIIIATPGRLNDCLEKRYLVLNQCNYIVLDEADMMIDLGFEPQVT 585
Query: 689 MVISRLP 709
V+ +P
Sbjct: 586 SVLDAMP 592
Score = 33.5 bits (73), Expect = 5.6
Identities = 17/47 (36%), Positives = 24/47 (51%)
Frame = +3
Query: 384 DPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
D + D AL++ PTREL Q + A+H RV+ G Q+ E
Sbjct: 484 DTEADGPYALVMAPTRELVQQIEKETRNFAQHFGFRVVSLVGGQSIE 530
>UniRef50_A0BDD2 Cluster: Chromosome undetermined scaffold_100,
whole genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_100,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 737
Score = 65.7 bits (153), Expect = 1e-09
Identities = 29/78 (37%), Positives = 49/78 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N + V +IIATPGR+I+++ K+ + +C +VLDEAD++ S F+ +
Sbjct: 298 GENKHHQWKELRAGVDIIIATPGRLIEMVKKKATNLQRCTYIVLDEADQMFSLGFEYQIR 357
Query: 689 MVISRLPKERQILLFSAT 742
+I ++ ++QILLF+AT
Sbjct: 358 SIIGQIRPDKQILLFTAT 375
Score = 50.0 bits (114), Expect = 6e-05
Identities = 25/61 (40%), Positives = 38/61 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F L ++L+ I + +EKP+ IQ ++P LSG++V+ AK G+GKT AY P+L
Sbjct: 190 FGHLQLDQKLVNKIVAQNFEKPTAIQSQALPCVLSGRNVIGVAKTGSGKTIAYVWPMLVH 249
Query: 210 V 212
V
Sbjct: 250 V 250
>UniRef50_Q14240 Cluster: Eukaryotic initiation factor 4A-II; n=37;
Bilateria|Rep: Eukaryotic initiation factor 4A-II - Homo
sapiens (Human)
Length = 407
Score = 65.7 bits (153), Expect = 1e-09
Identities = 28/88 (31%), Positives = 54/88 (61%), Gaps = 1/88 (1%)
Frame = +2
Query: 488 SCNGYYRGTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
+C+ GTN+R+++ ++ +++ TPGR+ D+++++ +M VLDEAD++LS
Sbjct: 131 TCHACIGGTNVRNEMQKLQAEAPHIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLS 190
Query: 665 QDFKGMLDMVISRLPKERQILLFSATFP 748
+ FK + + +L Q++L SAT P
Sbjct: 191 RGFKDQIYEIFQKLNTSIQVVLLSATMP 218
Score = 63.3 bits (147), Expect = 6e-09
Identities = 28/63 (44%), Positives = 44/63 (69%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F++ LK LL GI+ G+EKPS IQ+ +I + G DV+A+A++GTGKT + I +L
Sbjct: 33 DNFDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISIL 92
Query: 204 EQV 212
+Q+
Sbjct: 93 QQL 95
>UniRef50_A4QTR1 Cluster: ATP-dependent RNA helicase DBP9; n=4;
Ascomycota|Rep: ATP-dependent RNA helicase DBP9 -
Magnaporthe grisea (Rice blast fungus) (Pyricularia
grisea)
Length = 636
Score = 65.7 bits (153), Expect = 1e-09
Identities = 27/64 (42%), Positives = 45/64 (70%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F + L LL + ++ ++KP+ +Q +IP+AL G+DVLA+AK G+GKT AY +P+L
Sbjct: 43 SSFADLGLDPRLLQAVAQQSFQKPTLVQSKAIPLALEGRDVLAKAKTGSGKTAAYVLPIL 102
Query: 204 EQVI 215
+ V+
Sbjct: 103 QAVL 106
Score = 40.3 bits (90), Expect = 0.049
Identities = 22/62 (35%), Positives = 34/62 (54%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
++++TP +D +D+ LVLDEAD +LS + L+ V LPK Q ++ S
Sbjct: 173 IVVSTPSTAWRNVDSGALSLDKLTHLVLDEADLVLSYGYDEDLEKVARGLPKGVQTVMTS 232
Query: 737 AT 742
AT
Sbjct: 233 AT 234
>UniRef50_UPI00006CDDA3 Cluster: CLN3 protein; n=1; Tetrahymena
thermophila SB210|Rep: CLN3 protein - Tetrahymena
thermophila SB210
Length = 1138
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/90 (31%), Positives = 53/90 (58%)
Frame = +2
Query: 473 KTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEAD 652
K + S G N + + V+++IATPGR+++++ K+ + +C +V+DEAD
Sbjct: 160 KIYNISVGALLGGENKHEQWKMLKAGVEILIATPGRLMEMIQKKATNLRRCTYVVIDEAD 219
Query: 653 KLLSQDFKGMLDMVISRLPKERQILLFSAT 742
K+ S F+ + ++ ++ +RQ LLF+AT
Sbjct: 220 KMFSMGFEKQIRSIMQQIRPDRQTLLFTAT 249
Score = 50.8 bits (116), Expect = 3e-05
Identities = 23/54 (42%), Positives = 37/54 (68%)
Frame = +3
Query: 54 ELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
EL+ I + G+EKP+ IQ ++P LSG+D++ AK G+GKT +Y P+L ++
Sbjct: 72 ELMRQITKLGFEKPTQIQCQALPCGLSGRDIVGVAKTGSGKTVSYLWPLLIHIL 125
>UniRef50_Q8YH70 Cluster: ATP-DEPENDENT RNA HELICASE RHLE; n=10;
Rhizobiales|Rep: ATP-DEPENDENT RNA HELICASE RHLE -
Brucella melitensis
Length = 535
Score = 65.3 bits (152), Expect = 2e-09
Identities = 34/80 (42%), Positives = 44/80 (55%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + I RI + V+IATPGR+ DLM + + Q R LVLDEAD++L F +
Sbjct: 197 GVSKLSQIKRIAPGIDVLIATPGRLTDLMRDGLVDLSQTRWLVLDEADRMLDMGFINDVK 256
Query: 689 MVISRLPKERQILLFSATFP 748
+ ERQ LFSAT P
Sbjct: 257 RIAKATHAERQTALFSATMP 276
Score = 55.2 bits (127), Expect = 2e-06
Identities = 23/53 (43%), Positives = 36/53 (67%)
Frame = +3
Query: 57 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
LL G+ G +P PIQ +IP L G+D+L A+ G+GKT A+ +P+L+++I
Sbjct: 98 LLKGVEAAGMTEPKPIQTQAIPSQLEGQDILGIAQTGSGKTAAFSLPILQKII 150
>UniRef50_Q81JK1 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family; n=30; Firmicutes|Rep: ATP-dependent RNA
helicase, DEAD/DEAH box family - Bacillus anthracis
Length = 481
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/98 (29%), Positives = 54/98 (55%)
Frame = +2
Query: 455 DLY*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
D+ G+ R Y + + + Q +++ TPGR++D ++K +++ + L
Sbjct: 91 DITNIGRFKRIKAAAIYGKSPFARQKLELKQKTHIVVGTPGRVLDHIEKGTLSLERLKYL 150
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
V+DEAD++L+ F ++ +I LP +R +LFSAT P
Sbjct: 151 VIDEADEMLNMGFIDQVEAIIDELPTKRMTMLFSATLP 188
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/61 (34%), Positives = 38/61 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L +E+ + G+E P+ +Q IP+AL KD++ +++ G+GKT ++ IP+ E
Sbjct: 6 FSNYALSKEVRRALTGLGYEHPTEVQGEVIPVALQKKDLVVKSQTGSGKTASFGIPLCEM 65
Query: 210 V 212
V
Sbjct: 66 V 66
>UniRef50_Q7UNV7 Cluster: ATP-dependent RNA helicase; n=2;
Planctomycetaceae|Rep: ATP-dependent RNA helicase -
Rhodopirellula baltica
Length = 452
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/63 (47%), Positives = 43/63 (68%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+ F+E L + + + G+ PSPIQ A IP AL+GKDV+ +A+ GTGKT A+ IP+L
Sbjct: 44 DSFDELDLSPIMRRAVKDAGFTTPSPIQAALIPHALNGKDVIGQARTGTGKTAAFSIPIL 103
Query: 204 EQV 212
EQ+
Sbjct: 104 EQL 106
Score = 60.5 bits (140), Expect = 4e-08
Identities = 25/80 (31%), Positives = 47/80 (58%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G N+ + ++ Q+++ TPGR+ D + + + + +VLDEAD++L F+ ++
Sbjct: 151 GKNMNRQLRQLENGTQLVVGTPGRVHDHLQRGTLRTNNVWCVVLDEADRMLDIGFRPQIE 210
Query: 689 MVISRLPKERQILLFSATFP 748
++ + P+ RQ LL SAT P
Sbjct: 211 RIMRKCPRNRQTLLLSATLP 230
>UniRef50_Q2J6D3 Cluster: DEAD/DEAH box helicase-like; n=2;
Frankia|Rep: DEAD/DEAH box helicase-like - Frankia sp.
(strain CcI3)
Length = 649
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + + V +++ TPGR++DL + V + LVLDEAD++L F
Sbjct: 192 YGGRAYEPQLSALRAGVDIVVGTPGRLLDLARQHVLDLAGVGTLVLDEADEMLDLGFLPD 251
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++S+LP ERQ +LFSAT P
Sbjct: 252 VERIMSQLPTERQTMLFSATMP 273
Score = 52.4 bits (120), Expect = 1e-05
Identities = 23/62 (37%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ E + + E G PIQE ++P+AL+ D++ +A+ GTGKT A+ +PV++
Sbjct: 87 FAELGVRAETVSALTEAGIVHAFPIQELTLPLALARNDIIGQARTGTGKTLAFGVPVVQT 146
Query: 210 VI 215
V+
Sbjct: 147 VL 148
Score = 32.7 bits (71), Expect = 9.9
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
QAL+VVPTREL +Q + +RV+ G + +E
Sbjct: 159 QALVVVPTRELCVQVTADVTRAGARRGLRVLSVYGGRAYE 198
>UniRef50_Q44NG9 Cluster: Helicase, C-terminal:DEAD/DEAH box
helicase, N-terminal; n=9; Bacteroidetes/Chlorobi
group|Rep: Helicase, C-terminal:DEAD/DEAH box helicase,
N-terminal - Chlorobium limicola DSM 245
Length = 499
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/82 (35%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G N + + + ++IATPGR++DLM++ + VLDEAD++L F
Sbjct: 190 FGGVNQNPQTASLQKGIDILIATPGRLLDLMNQGHLHLRNIEFFVLDEADRMLDMGFIHD 249
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ +++ LPK++Q L FSAT P
Sbjct: 250 IRKILAELPKKKQSLFFSATMP 271
Score = 60.9 bits (141), Expect = 3e-08
Identities = 26/60 (43%), Positives = 39/60 (65%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + +L I E+G++ P+PIQ +IP+ L G D+L A+ GTGKT A+ IPVL+
Sbjct: 83 QFRSLAIIEPILQAIEEEGYQTPTPIQAEAIPLILDGNDLLGCAQTGTGKTAAFAIPVLQ 142
Score = 33.1 bits (72), Expect = 7.5
Identities = 16/40 (40%), Positives = 23/40 (57%)
Frame = +3
Query: 390 KKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
KK I++LI+ PTRELA+Q + +HT + V G
Sbjct: 152 KKRKIRSLIITPTRELAIQIGESFKAYGRHTGLTSTVIFG 191
>UniRef50_Q14NT1 Cluster: Putative atp-dependent rna helicase
protein; n=1; Spiroplasma citri|Rep: Putative
atp-dependent rna helicase protein - Spiroplasma citri
Length = 443
Score = 65.3 bits (152), Expect = 2e-09
Identities = 30/80 (37%), Positives = 52/80 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G++++ I + ++ +I+ TPGR+ D ++++ ++D+ + +VLDEAD++L FK LD
Sbjct: 107 GSHIQRQIYALRKS-NIIVGTPGRIADHINRKTLRLDKIKTIVLDEADEMLKMGFKTDLD 165
Query: 689 MVISRLPKERQILLFSATFP 748
V P + Q LLFSAT P
Sbjct: 166 KVFQNAPNKYQTLLFSATMP 185
Score = 47.6 bits (108), Expect = 3e-04
Identities = 19/54 (35%), Positives = 37/54 (68%)
Frame = +3
Query: 69 IFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVICYM*Q 230
I + G+ + IQE +IP+AL+ +D++ ++ GTGKT A+ +P+L+ + ++ Q
Sbjct: 16 IAKMGYTNLTEIQEKAIPVALNSQDIIGKSHTGTGKTVAFIVPILQNLNTHLKQ 69
>UniRef50_A6H0L1 Cluster: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family; n=1; Flavobacterium psychrophilum
JIP02/86|Rep: Probable ATP-dependent RNA helicase,
DEAD/DEAH box family - Flavobacterium psychrophilum
(strain JIP02/86 / ATCC 49511)
Length = 644
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ + I + Q+I+ATPGRM D++++++ + Q +LDEAD++L+ F
Sbjct: 107 YGGASITEQARDIKRGAQIIVATPGRMQDMINRRLVDISQINYCILDEADEMLNMGFYED 166
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++S P E+ LFSAT P
Sbjct: 167 IVNILSTTPDEKNTWLFSATMP 188
Score = 56.0 bits (129), Expect = 9e-07
Identities = 26/64 (40%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPV 200
N+FE+ L LL I + G+E P+ +QE +IP+ L D++A A+ GTGKT A+ PV
Sbjct: 2 NKFEQLGLTESLLRAIIDLGFENPTEVQEKAIPMLLEKDIDLVALAQTGTGKTAAFGFPV 61
Query: 201 LEQV 212
++++
Sbjct: 62 IQKI 65
>UniRef50_A2TP65 Cluster: ATP-dependent RNA helicase, DEAD/DEAH box
family protein; n=13; Bacteroidetes|Rep: ATP-dependent
RNA helicase, DEAD/DEAH box family protein - Dokdonia
donghaensis MED134
Length = 638
Score = 65.3 bits (152), Expect = 2e-09
Identities = 28/82 (34%), Positives = 52/82 (63%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G+N+++ I + Q+++ATPGRM D+M +++ + + VLDEAD++L+ F
Sbjct: 106 YGGSNIQEQAREISRGAQIVVATPGRMQDMMRRRMVDITKLSYCVLDEADEMLNMGFYED 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ +++ P+++ LFSAT P
Sbjct: 166 ITNILADTPEDKLTWLFSATMP 187
Score = 52.4 bits (120), Expect = 1e-05
Identities = 26/62 (41%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALS-GKDVLARAKNGTGKTGAYCIPVLE 206
F++ L LL I + G+E PS IQE +IP L+ +D++A A+ GTGKT A+ P+L+
Sbjct: 3 FDQLGLNAPLLQAIADMGFETPSKIQEEAIPQLLAEDRDMVALAQTGTGKTAAFGFPLLQ 62
Query: 207 QV 212
+
Sbjct: 63 NI 64
Score = 33.9 bits (74), Expect = 4.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKH-TDIRVMVTTGAQTFE 524
+D T Q LI+ PTREL LQ + AKH +RV+ G +
Sbjct: 64 IDASSKTTQGLIIAPTRELCLQITNEMKLYAKHIKGVRVVAVYGGSNIQ 112
>UniRef50_A1U3D6 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Marinobacter aquaeolei VT8|Rep: DEAD/DEAH box
helicase domain protein - Marinobacter aquaeolei (strain
ATCC 700491 / DSM 11845 / VT8)(Marinobacter
hydrocarbonoclasticus (strain DSM 11845))
Length = 528
Score = 65.3 bits (152), Expect = 2e-09
Identities = 32/82 (39%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G + I + + QVI+ TPGRM+D + K K+D + LVLDEAD++L F
Sbjct: 128 YGGQDFSPQIRGLKRGAQVIVGTPGRMLDHLRKGTLKLDGLKALVLDEADEMLRMGFIDD 187
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++++ P Q LFSAT P
Sbjct: 188 VEAILAKTPDTCQRALFSATMP 209
Score = 55.2 bits (127), Expect = 2e-06
Identities = 26/61 (42%), Positives = 37/61 (60%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L +L + G+E PSPIQ SIP L+G +L A+ GTGKT A+ +P+L +
Sbjct: 26 FAELGLDPAVLEAVSAVGYETPSPIQAQSIPALLAGNHLLGVAQTGTGKTAAFALPLLSR 85
Query: 210 V 212
+
Sbjct: 86 I 86
>UniRef50_A1KUM8 Cluster: Putative ATP-dependent RNA helicase; n=4;
Neisseria|Rep: Putative ATP-dependent RNA helicase -
Neisseria meningitidis serogroup C / serotype 2a (strain
ATCC 700532 /FAM18)
Length = 483
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/66 (46%), Positives = 44/66 (66%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
N F L EL+ + +G+E P+PIQ A+IP AL+G D+LA A+ GTGKT A+ +P L
Sbjct: 29 NPFSSLGLGTELVSALTAQGYENPTPIQAAAIPKALAGHDLLAAAQTGTGKTAAFMLPSL 88
Query: 204 EQVICY 221
E++ Y
Sbjct: 89 ERLKRY 94
Score = 60.9 bits (141), Expect = 3e-08
Identities = 27/81 (33%), Positives = 50/81 (61%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
+ G N+ + ++++AT GR++D + ++ +++ ++VLDEAD++L F
Sbjct: 140 FGGMNMDKQTADLRAGCEIVVATVGRLLDHVKQKNISLNKVEIVVLDEADRMLDMGFIDD 199
Query: 683 LDMVISRLPKERQILLFSATF 745
+ ++ LPK+RQ LLFSATF
Sbjct: 200 IRKIMQMLPKQRQTLLFSATF 220
>UniRef50_A3AD37 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. japonica (Rice)
Length = 552
Score = 65.3 bits (152), Expect = 2e-09
Identities = 29/82 (35%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT+ I + V ++I TPGRM DL++ + +++ +VLDEAD++L F+
Sbjct: 265 YGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVVLDEADRMLDMGFEPE 324
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++S+ RQ ++FSAT+P
Sbjct: 325 VRAILSQTASVRQTVMFSATWP 346
Score = 46.0 bits (104), Expect = 0.001
Identities = 21/45 (46%), Positives = 29/45 (64%)
Frame = +3
Query: 78 KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
KG+E+PSPIQ + P L G+D + A G+GKT A+ +P L V
Sbjct: 110 KGFERPSPIQAYAWPYLLDGRDFIGIAATGSGKTIAFGVPALMHV 154
Score = 35.5 bits (78), Expect = 1.4
Identities = 14/47 (29%), Positives = 26/47 (55%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLD 643
Y GT+ I + V ++I TPGRM DL++ + +++ ++ D
Sbjct: 202 YGGTSKGPQISALKSGVDIVIGTPGRMKDLIEMGICRLNDVSFVIAD 248
>UniRef50_Q869K2 Cluster: Similar to Dictyostelium discoideum (Slime
mold). Putative RNA helicase; n=3; Dictyostelium
discoideum|Rep: Similar to Dictyostelium discoideum
(Slime mold). Putative RNA helicase - Dictyostelium
discoideum (Slime mold)
Length = 1151
Score = 65.3 bits (152), Expect = 2e-09
Identities = 26/85 (30%), Positives = 52/85 (61%), Gaps = 3/85 (3%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLM---DKQVAKMDQCRMLVLDEADKLLSQDF 673
Y G ++ + I + + +++ TPGRMID++ ++++ + + LVLDEAD++ F
Sbjct: 617 YGGASISEQIAELKRGADIVVCTPGRMIDILCANNRRITNLRRVTFLVLDEADRMFDMGF 676
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
++ ++ + +RQ ++FSATFP
Sbjct: 677 GPQINCIVDSIRPDRQTIMFSATFP 701
Score = 44.8 bits (101), Expect = 0.002
Identities = 20/56 (35%), Positives = 37/56 (66%)
Frame = +3
Query: 48 KRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
K LL+ F+ +EKP+ IQ +IP ++G+D++ A+ G+GKT A+ +P+ ++
Sbjct: 519 KVHLLLKKFQ--YEKPTSIQAQTIPAIMNGRDLIGIARTGSGKTLAFLLPMFRHIL 572
>UniRef50_Q688Z4 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 871
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + I++N +++ATPGR++ ++ + ++ + +V DEAD+L F+ L
Sbjct: 130 GDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLT 189
Query: 689 MVISRLPKERQILLFSATFP 748
+ R+P+ RQ LLFSAT P
Sbjct: 190 ETLKRIPESRQTLLFSATLP 209
Score = 57.6 bits (133), Expect = 3e-07
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
R + +++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A
Sbjct: 18 RKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAA 77
Query: 186 YCIPVLEQV 212
+ IP+L+++
Sbjct: 78 FVIPMLQKL 86
Score = 39.1 bits (87), Expect = 0.11
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 390 KKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
++DT I+AL+V PTRELALQT ++ EL + T +R G E
Sbjct: 88 RRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIE 134
>UniRef50_Q65XX1 Cluster: Vasa-and belle-like helicase protein 1,
isoform c; n=4; Caenorhabditis|Rep: Vasa-and belle-like
helicase protein 1, isoform c - Caenorhabditis elegans
Length = 660
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N RD + R+ ++IATPGR+ID++++ + CR LVLDEAD++L F+ + +
Sbjct: 262 NYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 321
Query: 695 ISR-LPKE--RQILLFSATFP 748
+ + +P + R +FSATFP
Sbjct: 322 VGQGMPPKTARTTAMFSATFP 342
Score = 52.0 bits (119), Expect = 2e-05
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 210 VI 215
++
Sbjct: 201 IL 202
>UniRef50_Q5CNJ7 Cluster: Similar to RNA-dependent helicase p68;
n=2; Cryptosporidium|Rep: Similar to RNA-dependent
helicase p68 - Cryptosporidium hominis
Length = 406
Score = 65.3 bits (152), Expect = 2e-09
Identities = 31/82 (37%), Positives = 50/82 (60%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G R I V++ IA PGR+IDL+++ + + LVLDEAD++L F+
Sbjct: 96 YGGVPKRPQQASIRNGVEICIACPGRLIDLLEEGYTNLSRVTYLVLDEADRMLDMGFEPQ 155
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ ++S++ +RQ LL+SAT+P
Sbjct: 156 IRKLVSQIRPDRQTLLWSATWP 177
Score = 36.7 bits (81), Expect = 0.61
Identities = 15/38 (39%), Positives = 25/38 (65%)
Frame = +3
Query: 90 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+P+ IQ P+ALSG D++ A+ G+GKT + +P +
Sbjct: 10 EPTAIQVQGWPVALSGHDMIGIAETGSGKTLGFLLPAM 47
>UniRef50_A4FZ46 Cluster: DEAD/DEAH box helicase domain protein;
n=4; Euryarchaeota|Rep: DEAD/DEAH box helicase domain
protein - Methanococcus maripaludis
Length = 541
Score = 65.3 bits (152), Expect = 2e-09
Identities = 27/82 (32%), Positives = 53/82 (64%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I + + VQ+++ TPGR++D + ++ K++ +VLDEAD++L+ F
Sbjct: 106 YGGQSIDRQIRELRRGVQIVVGTPGRILDHISRRTIKLENVSYVVLDEADEMLNMGFIDD 165
Query: 683 LDMVISRLPKERQILLFSATFP 748
++ ++ + E+++LLFSAT P
Sbjct: 166 VEEILKSVSTEKRMLLFSATLP 187
Score = 61.3 bits (142), Expect = 2e-08
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLE 206
F+ L E+L + +KG+ P+PIQE +IPI + GK D++ +A+ GTGKT A+ IP+LE
Sbjct: 4 FKNLGLSDEILEALEKKGFTTPTPIQEQAIPILIEGKRDIVGQAQTGTGKTAAFGIPILE 63
Query: 207 QV 212
+
Sbjct: 64 TI 65
>UniRef50_UPI00015B5D7B Cluster: PREDICTED: similar to LD28101p;
n=1; Nasonia vitripennis|Rep: PREDICTED: similar to
LD28101p - Nasonia vitripennis
Length = 782
Score = 64.9 bits (151), Expect = 2e-09
Identities = 26/69 (37%), Positives = 46/69 (66%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
+ + F+ L + ++ GI ++G++ P+PIQ +IPIAL G+DV+A A+ G+GKT
Sbjct: 32 KKSNKSGGFQSMGLSQSVIRGILKRGYKIPTPIQRKTIPIALDGRDVVAMARTGSGKTAC 91
Query: 186 YCIPVLEQV 212
+ IP+ E++
Sbjct: 92 FLIPMFEKL 100
Score = 62.1 bits (144), Expect = 1e-08
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G ++ + I+ N +I+ATPGR + + + + ++ DEAD+L F +
Sbjct: 145 GDSMDNQFSAIHGNPDIIVATPGRFLHICIEMDMNLKSIEFVIFDEADRLFEMGFGEQIH 204
Query: 689 MVISRLPKERQILLFSATFP 748
+ +RLPK RQ LLFSAT P
Sbjct: 205 EIANRLPKNRQTLLFSATLP 224
Score = 35.5 bits (78), Expect = 1.4
Identities = 17/44 (38%), Positives = 26/44 (59%)
Frame = +3
Query: 393 KDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
K +ALI+ PTRELALQT + E+ + T ++ V G + +
Sbjct: 106 KTGARALILSPTRELALQTQRFIKEIGRFTGLKSSVILGGDSMD 149
>UniRef50_UPI0000DB7226 Cluster: PREDICTED: similar to Probable
ATP-dependent RNA helicase DDX20 (DEAD box protein 20)
(DEAD box protein DP 103) (Component of gems 3)
(Gemin-3); n=1; Apis mellifera|Rep: PREDICTED: similar
to Probable ATP-dependent RNA helicase DDX20 (DEAD box
protein 20) (DEAD box protein DP 103) (Component of gems
3) (Gemin-3) - Apis mellifera
Length = 648
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/80 (36%), Positives = 50/80 (62%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + +D ++ N Q+ + PGR+ L+DK K++ R+ VLDEADKL+ F+ ++
Sbjct: 102 GLAIENDKKKV-NNCQIAVGAPGRIRHLIDKGFLKVENVRLFVLDEADKLMETSFQKDIN 160
Query: 689 MVISRLPKERQILLFSATFP 748
+ S+LP +Q++ SAT+P
Sbjct: 161 YIFSKLPLSKQVIASSATYP 180
Score = 53.6 bits (123), Expect = 5e-06
Identities = 24/54 (44%), Positives = 38/54 (70%)
Frame = +3
Query: 51 RELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+++L G+ G+++PSPIQ +IP+ G D++ RAK+GTGKT +CI LE +
Sbjct: 5 QKILDGLSVCGFQRPSPIQLKAIPLGRCGFDLIMRAKSGTGKTLVFCIISLEMI 58
>UniRef50_UPI0000499A01 Cluster: DEAD/DEAH box helicase; n=1;
Entamoeba histolytica HM-1:IMSS|Rep: DEAD/DEAH box
helicase - Entamoeba histolytica HM-1:IMSS
Length = 684
Score = 64.9 bits (151), Expect = 2e-09
Identities = 24/61 (39%), Positives = 42/61 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F+ L ++ L+G+ +KG+ P+PIQ +IP L G D++A A+ G+GKT AY +P++ +
Sbjct: 15 FQSMGLNKQTLLGVLKKGYRVPTPIQRKAIPAILRGNDIIAMARTGSGKTAAYLVPIINR 74
Query: 210 V 212
+
Sbjct: 75 L 75
Score = 58.0 bits (134), Expect = 2e-07
Identities = 27/80 (33%), Positives = 43/80 (53%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G+ L D + +I+ATPGR+ +++ +++ M+ DEAD + F +
Sbjct: 119 GSKLSDQFDNLSSGPDIIVATPGRLTFILEGANISLNRVEMVCFDEADLMFESGFSEQVS 178
Query: 689 MVISRLPKERQILLFSATFP 748
++ LP RQILLFSAT P
Sbjct: 179 DIMRMLPPTRQILLFSATLP 198
Score = 36.7 bits (81), Expect = 0.61
Identities = 16/36 (44%), Positives = 26/36 (72%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+++LI+ PTRELALQT ++ EL K T+++ + G
Sbjct: 83 VRSLIICPTRELALQTIKVFNELGKLTNLKASLIIG 118
>UniRef50_UPI00015A4B44 Cluster: DEAD (Asp-Glu-Ala-Asp) box
polypeptide 56; n=1; Danio rerio|Rep: DEAD
(Asp-Glu-Ala-Asp) box polypeptide 56 - Danio rerio
Length = 344
Score = 64.9 bits (151), Expect = 2e-09
Identities = 25/45 (55%), Positives = 38/45 (84%)
Frame = +3
Query: 81 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
GW +P+ IQE +IP+AL GKD+LARA+ G+GKT AY +P++++V+
Sbjct: 9 GWSQPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAVPLIQRVL 53
Score = 40.7 bits (91), Expect = 0.037
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 1/69 (1%)
Frame = +2
Query: 539 IYQNVQVIIATPGRMIDLMDKQVAKM-DQCRMLVLDEADKLLSQDFKGMLDMVISRLPKE 715
+ + ++++TP R+ ++ Q ++ MLV+DEAD L S F+ L ++ LPK
Sbjct: 112 LMEKPDIVVSTPSRIQAHINAQNLQLHSSLEMLVIDEADLLFSFGFEADLKNLLCHLPKI 171
Query: 716 RQILLFSAT 742
Q L SAT
Sbjct: 172 YQAFLMSAT 180
>UniRef50_Q4V836 Cluster: MGC114699 protein; n=9; Deuterostomia|Rep:
MGC114699 protein - Xenopus laevis (African clawed frog)
Length = 758
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/62 (48%), Positives = 42/62 (67%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L R LL I + +P+PIQ+A IP+ L GKD+ A A GTGKT A+ +PVLE+
Sbjct: 183 FQDMNLSRPLLKAISAMSFTQPTPIQKACIPVGLLGKDICACAATGTGKTAAFMLPVLER 242
Query: 210 VI 215
+I
Sbjct: 243 LI 244
Score = 51.2 bits (117), Expect = 3e-05
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQC-RMLVLDEADKLLSQDFKGML 685
G +++ + V+IATPGR+ID + + C +L+LDEAD++L + F+ +
Sbjct: 289 GLDVKTQEAALRSGPDVLIATPGRLIDHLHNCPSFSLNCIEVLILDEADRMLDEYFEEQM 348
Query: 686 DMVISRLPKERQILLFSAT 742
+I +RQ LLFSAT
Sbjct: 349 KEIIRLCSHQRQTLLFSAT 367
>UniRef50_Q64VR8 Cluster: ATP-dependent RNA helicase DeaD; n=14;
Bacteria|Rep: ATP-dependent RNA helicase DeaD -
Bacteroides fragilis
Length = 427
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/61 (47%), Positives = 42/61 (68%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE L +L + ++G+ P+PIQE SIPI L GKD+L A+ GTGKT A+ IP+L++
Sbjct: 3 FENLNLIEPILKALRQEGYTSPTPIQEQSIPILLQGKDLLGCAQTGTGKTAAFSIPILQK 62
Query: 210 V 212
+
Sbjct: 63 L 63
Score = 60.9 bits (141), Expect = 3e-08
Identities = 29/80 (36%), Positives = 45/80 (56%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + D +R +Q+++ATPGR++DL+ + + VLDEAD++L F +
Sbjct: 110 GQKPQTDALR--SGIQILVATPGRLLDLISQGFISLSSLDFFVLDEADRMLDMGFIHDIK 167
Query: 689 MVISRLPKERQILLFSATFP 748
++ LP RQ L FSAT P
Sbjct: 168 RILKLLPARRQTLFFSATMP 187
>UniRef50_A4BHZ9 Cluster: ATP-dependent RNA helicase; n=1; Reinekea
sp. MED297|Rep: ATP-dependent RNA helicase - Reinekea
sp. MED297
Length = 534
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/69 (42%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPK--ER 718
Q +++ATPGR+ID M+++ +DQ ML++DEAD++L F + ++ P+ R
Sbjct: 151 QRTDILVATPGRLIDFMNRKAVFLDQIEMLIIDEADRMLDMGFIPDIKTIVRATPRTENR 210
Query: 719 QILLFSATF 745
Q LLFSATF
Sbjct: 211 QTLLFSATF 219
Score = 51.2 bits (117), Expect = 3e-05
Identities = 24/62 (38%), Positives = 37/62 (59%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L L+ I E G+E SPIQ ++P AL+G D + +A+ GTGKT A+ I +
Sbjct: 29 FHDLFLPIALMRAIQEVGYEYCSPIQAMTLPYALAGHDCIGKAQTGTGKTAAFLITAITD 88
Query: 210 VI 215
++
Sbjct: 89 LL 90
Score = 35.5 bits (78), Expect = 1.4
Identities = 16/40 (40%), Positives = 25/40 (62%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
+ALI+ PTRELALQ ++ L K++ ++V G F+
Sbjct: 103 RALILAPTRELALQIAEDAKALTKYSRLKVAAVVGGMDFD 142
>UniRef50_A2YDR2 Cluster: Putative uncharacterized protein; n=2;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 523
Score = 64.9 bits (151), Expect = 2e-09
Identities = 30/80 (37%), Positives = 54/80 (67%), Gaps = 2/80 (2%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQC-RMLVLDEADKLLSQDFKGML 685
G +LR + ++ + + V++ATPGR++D M K + +C + L++DEAD++L Q+F+ +
Sbjct: 195 GIDLRGEAEQLAKGINVLVATPGRLLDHMQKTKSFKYECLKCLIIDEADRILEQNFEEQM 254
Query: 686 DMVISRLPKE-RQILLFSAT 742
+ LP++ RQ +LFSAT
Sbjct: 255 KQIFKLLPRQGRQTVLFSAT 274
Score = 41.1 bits (92), Expect = 0.028
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +3
Query: 102 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVIC 218
IQ SIP + G DV+A AK G+GKT A+ IP +E ++C
Sbjct: 112 IQARSIPPLMLGSDVMASAKTGSGKTLAFLIPAIE-LLC 149
>UniRef50_O17157 Cluster: Putative uncharacterized protein; n=3;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 634
Score = 64.9 bits (151), Expect = 2e-09
Identities = 27/62 (43%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F +F L +L I E GWEK + +QE+ I +AL K+++ RA+ G+GKTGA+ IP++++
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 210 VI 215
+I
Sbjct: 151 LI 152
Score = 39.9 bits (89), Expect = 0.065
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
V++ TPG+++ + + LV+DEAD LLS ++ + + S+LP Q L+ S
Sbjct: 216 VVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTS 275
Query: 737 AT 742
AT
Sbjct: 276 AT 277
>UniRef50_P54475 Cluster: Probable ATP-dependent RNA helicase yqfR;
n=12; Bacillaceae|Rep: Probable ATP-dependent RNA
helicase yqfR - Bacillus subtilis
Length = 438
Score = 64.9 bits (151), Expect = 2e-09
Identities = 32/93 (34%), Positives = 54/93 (58%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
G R C + GT+ + I ++ +++ TPGR+ DL+ +Q + + LV+DEA
Sbjct: 101 GSQIRSKC--FIGGTDKQKSIDKLKIQPHLVVGTPGRIADLIKEQALSVHKAESLVIDEA 158
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D +L F +D + SR+P++ Q+L+FSAT P
Sbjct: 159 DLMLDMGFLADVDYIGSRMPEDLQMLVFSATIP 191
Score = 47.6 bits (108), Expect = 3e-04
Identities = 21/62 (33%), Positives = 39/62 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+FE + LK ++ + G+ +P+ IQ+ IP L + V+ +++ GTGKT AY +P+L
Sbjct: 5 KFELYELKPFIIDAVHRLGFYEPTDIQKRLIPAVLKKESVIGQSQTGTGKTHAYLLPLLN 64
Query: 207 QV 212
++
Sbjct: 65 KI 66
Score = 34.7 bits (76), Expect = 2.4
Identities = 14/32 (43%), Positives = 21/32 (65%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAK 476
+DP KD +Q +I PTRELA Q Q +++ +
Sbjct: 66 IDPAKDVVQVVITAPTRELANQIYQEALKITQ 97
>UniRef50_Q9SF41 Cluster: DEAD-box ATP-dependent RNA helicase 45;
n=15; Eukaryota|Rep: DEAD-box ATP-dependent RNA helicase
45 - Arabidopsis thaliana (Mouse-ear cress)
Length = 989
Score = 64.9 bits (151), Expect = 2e-09
Identities = 29/89 (32%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Frame = +2
Query: 491 CNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRM---LVLDEADKLL 661
C Y G+ + I + + ++++ TPGRMID++ K+ R LV+DEAD++
Sbjct: 500 CVPVYGGSGVAQQISELKRGTEIVVCTPGRMIDILCTSSGKITNLRRVTYLVMDEADRMF 559
Query: 662 SQDFKGMLDMVISRLPKERQILLFSATFP 748
F+ + ++ + +RQ +LFSATFP
Sbjct: 560 DMGFEPQITRIVQNIRPDRQTVLFSATFP 588
Score = 49.2 bits (112), Expect = 1e-04
Identities = 21/56 (37%), Positives = 36/56 (64%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L ++L + + +EKP PIQ ++PI +SG+D + AK G+GKT + +P+L +
Sbjct: 403 LTSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHI 458
>UniRef50_Q32LU9 Cluster: LOC562123 protein; n=3; Danio rerio|Rep:
LOC562123 protein - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 483
Score = 64.5 bits (150), Expect = 3e-09
Identities = 26/80 (32%), Positives = 51/80 (63%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G L + R+ N++++I TPGR+++++ ++ ++D R +V+DEAD +L F+ +
Sbjct: 280 GMPLPPQLHRLKHNIKIVIGTPGRLLEILKQKAVQLDHVRTVVVDEADTMLKMGFQQQVL 339
Query: 689 MVISRLPKERQILLFSATFP 748
++ ++P + Q LL SAT P
Sbjct: 340 DILEQVPDDHQTLLTSATIP 359
Score = 50.8 bits (116), Expect = 3e-05
Identities = 19/45 (42%), Positives = 33/45 (73%)
Frame = +3
Query: 81 GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
G+E P+P+Q +P+ L+G+DV+A A G+GKT A+ +PV+ + +
Sbjct: 189 GYEAPTPVQMQMVPVGLTGRDVIATADTGSGKTVAFLLPVVMRAL 233
>UniRef50_A7JLA3 Cluster: ATP-dependent RNA helicase; n=20;
Francisella|Rep: ATP-dependent RNA helicase -
Francisella tularensis subsp. novicida GA99-3548
Length = 569
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/82 (40%), Positives = 48/82 (58%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G I + Q V+V++ T GR++D ++K ++D R LVLDEAD++L F
Sbjct: 113 YGGQEYGSQIRALKQGVKVVVGTTGRVMDHIEKGTLQLDNLRALVLDEADEMLRMGFIDD 172
Query: 683 LDMVISRLPKERQILLFSATFP 748
+ V+S + E Q LLFSAT P
Sbjct: 173 VKFVLSHVSDECQRLLFSATIP 194
Score = 62.1 bits (144), Expect = 1e-08
Identities = 24/62 (38%), Positives = 44/62 (70%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F + L ++++ + + G+E P+PIQ+ +IP LSG+DVL +A+ GTGKT A+ +P++
Sbjct: 8 DFSQLGLNQDIVDTVIKLGYENPTPIQQYAIPYILSGRDVLGQAQTGTGKTAAFALPLIN 67
Query: 207 QV 212
+
Sbjct: 68 NM 69
>UniRef50_A5G1U8 Cluster: DEAD/DEAH box helicase domain protein;
n=1; Acidiphilium cryptum JF-5|Rep: DEAD/DEAH box
helicase domain protein - Acidiphilium cryptum (strain
JF-5)
Length = 525
Score = 64.5 bits (150), Expect = 3e-09
Identities = 32/93 (34%), Positives = 53/93 (56%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEA 649
GK R S G R+ V +++ATPGR++D + V ++D +VLDEA
Sbjct: 154 GKFTRPSVAVVIGGAKPGPQARRMESGVDLLVATPGRLLDHVAAGVIRLDAVETVVLDEA 213
Query: 650 DKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
D++L F + ++++LP++RQ ++FSAT P
Sbjct: 214 DQMLDLGFIPAIRQIMAKLPRQRQAVMFSATMP 246
Score = 59.3 bits (137), Expect = 1e-07
Identities = 26/62 (41%), Positives = 39/62 (62%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
+F L LL I E+ +E P+PIQ SIP+ L G D++ A+ GTGKT A+ +P+L
Sbjct: 58 DFTTLGLAEPLLRAISEQSYETPTPIQARSIPVMLEGHDLVGIAQTGTGKTAAFVLPILH 117
Query: 207 QV 212
++
Sbjct: 118 RI 119
>UniRef50_Q5CP59 Cluster: DEAD box polypeptide, Y
chromosome-related; n=3; Apicomplexa|Rep: DEAD box
polypeptide, Y chromosome-related - Cryptosporidium
hominis
Length = 702
Score = 64.5 bits (150), Expect = 3e-09
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 5/90 (5%)
Frame = +2
Query: 494 NGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDF 673
N Y G+ +R IM + + +I+ATPGR+ DL+D+ + + L+LDEAD++L F
Sbjct: 316 NVLYGGSEVRSQIMDLDRGSDIIVATPGRLRDLIDRGKVNLKLIKFLILDEADRMLDMGF 375
Query: 674 KGMLDMVI--SRLPKE---RQILLFSATFP 748
+ ++ S +P RQ ++FSATFP
Sbjct: 376 APQIREIVEDSEMPHSLDGRQTVMFSATFP 405
Score = 51.2 bits (117), Expect = 3e-05
Identities = 21/53 (39%), Positives = 38/53 (71%)
Frame = +3
Query: 57 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
LL I +E+P+P+Q+ SIP L+G+D++A A+ G+GKT A+ P++ +++
Sbjct: 212 LLDNIRRVKYERPTPVQKFSIPTVLNGRDLMACAQTGSGKTAAFLFPIVMKML 264
>UniRef50_Q4Z5Q6 Cluster: ATP-dependent RNA helicase, putative; n=4;
Plasmodium (Vinckeia)|Rep: ATP-dependent RNA helicase,
putative - Plasmodium berghei
Length = 1312
Score = 64.5 bits (150), Expect = 3e-09
Identities = 28/85 (32%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLM---DKQVAKMDQCRMLVLDEADKLLSQDF 673
Y G+N+ + + + V++I+ TPGR+ID++ + +V +++ +VLDEAD+LL F
Sbjct: 677 YGGSNIGAQLNVLKKGVEIIVGTPGRIIDILTISNSKVTNLNRASFIVLDEADRLLDLGF 736
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + +++ K++Q + SATFP
Sbjct: 737 ESQIHSILNNCRKDKQTAMISATFP 761
Score = 41.9 bits (94), Expect = 0.016
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L ++L + +K ++K IQ +IP + G+D++A A+ G+GKT +Y P++
Sbjct: 571 FYQCGLPGKILNILEKKNFKKMFSIQMQAIPALMCGRDIIAIAETGSGKTISYLFPLIRH 630
Query: 210 VI 215
V+
Sbjct: 631 VL 632
>UniRef50_A7RHS2 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 620
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/80 (36%), Positives = 46/80 (57%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + R+ VQVI+ATPGRM++++ +Q + V+DE D +L F+ +
Sbjct: 312 GVPVPPQLHRLKMGVQVIVATPGRMVEIISRQAVDLTHVIGCVVDEVDTMLQLGFEQQVQ 371
Query: 689 MVISRLPKERQILLFSATFP 748
++ RL RQ +LFSAT P
Sbjct: 372 QILERLSNRRQTMLFSATIP 391
Score = 50.0 bits (114), Expect = 6e-05
Identities = 20/62 (32%), Positives = 35/62 (56%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
EF L + G+ P+PIQ +P+ LSG+DV+ A G+GKT ++ +P++
Sbjct: 197 EFFHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLLSGRDVMVCASTGSGKTASFLLPMIS 256
Query: 207 QV 212
++
Sbjct: 257 RI 258
>UniRef50_A2DB16 Cluster: DEAD/DEAH box helicase family protein;
n=1; Trichomonas vaginalis G3|Rep: DEAD/DEAH box
helicase family protein - Trichomonas vaginalis G3
Length = 449
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/63 (46%), Positives = 46/63 (73%), Gaps = 1/63 (1%)
Frame = +2
Query: 557 VIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
+II TPGR ID + + +V K++ + VLDEAD+LL + F+ L+ ++S+LP++ Q LLF
Sbjct: 130 IIIGTPGRFIDSIFNAKVLKLEHLQFFVLDEADRLLGKGFESQLNTIVSQLPEKHQTLLF 189
Query: 734 SAT 742
+AT
Sbjct: 190 TAT 192
Score = 46.8 bits (106), Expect = 6e-04
Identities = 19/64 (29%), Positives = 40/64 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L + ++ + E + P+ +Q +IP LSG+D+ A A G+GK+ A+ IP++++
Sbjct: 9 FLDLKLAKPIIRALNENNFTNPTKVQAETIPKILSGQDICATAITGSGKSMAFLIPIVQK 68
Query: 210 VICY 221
++ +
Sbjct: 69 LLTF 72
>UniRef50_Q9FNM7 Cluster: DEAD-box ATP-dependent RNA helicase 26;
n=14; Magnoliophyta|Rep: DEAD-box ATP-dependent RNA
helicase 26 - Arabidopsis thaliana (Mouse-ear cress)
Length = 850
Score = 64.5 bits (150), Expect = 3e-09
Identities = 31/62 (50%), Positives = 43/62 (69%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++F L L I + G+E + +QEA++PI L GKDVLA+AK GTGKT A+ +P +E
Sbjct: 384 FDQFPLSPLSLKAIKDAGFETMTVVQEATLPIILQGKDVLAKAKTGTGKTVAFLLPAIEA 443
Query: 210 VI 215
VI
Sbjct: 444 VI 445
Score = 61.7 bits (143), Expect = 2e-08
Identities = 33/84 (39%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Frame = +2
Query: 509 GTNLRDDIMRIYQN-VQVIIATPGRMIDLMDKQ---VAKMDQCRMLVLDEADKLLSQDFK 676
GT L + R+ N Q+++ATPGR+ D ++ ++ ++LVLDEAD LL F+
Sbjct: 496 GTKLPTEQRRMQTNPCQILVATPGRLKDHIENTSGFATRLMGVKVLVLDEADHLLDMGFR 555
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
++ +I+ +PK+RQ LFSAT P
Sbjct: 556 RDIERIIAAVPKQRQTFLFSATVP 579
>UniRef50_O00571 Cluster: ATP-dependent RNA helicase DDX3X; n=74;
Metazoa|Rep: ATP-dependent RNA helicase DDX3X - Homo
sapiens (Human)
Length = 662
Score = 64.5 bits (150), Expect = 3e-09
Identities = 29/86 (33%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y G ++ I + + +++ATPGR++D+M++ +D C+ LVLDEAD++L F+
Sbjct: 301 YGGADIGQQIRDLERGCHLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQ 360
Query: 683 LDMVISR--LPKE--RQILLFSATFP 748
+ ++ + +P + R ++FSATFP
Sbjct: 361 IRRIVEQDTMPPKGVRHTMMFSATFP 386
Score = 50.0 bits (114), Expect = 6e-05
Identities = 21/54 (38%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Frame = +3
Query: 54 ELLMGIFE-KGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
E++MG E + +P+P+Q+ +IPI +D++A A+ G+GKT A+ +P+L Q+
Sbjct: 189 EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 242
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 742,841,056
Number of Sequences: 1657284
Number of extensions: 15120230
Number of successful extensions: 39850
Number of sequences better than 10.0: 500
Number of HSP's better than 10.0 without gapping: 36116
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39431
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 61323318355
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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