Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00301
         (748 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicas...    60   2e-11
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    26   0.28 
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   4.5  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   4.5  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   7.9  
AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450 ...    21   7.9  
AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory recept...    21   7.9  

>AY887136-1|AAW78361.1|  580|Tribolium castaneum vasa RNA helicase
           protein.
          Length = 580

 Score = 60.1 bits (139), Expect = 2e-11
 Identities = 32/86 (37%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
 Frame = +2

Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
           Y GT+      RI     +++ATPGR+ D +++     +  +  VLDEAD++L   F G 
Sbjct: 270 YGGTSTNHQRGRILGGCHILVATPGRLKDFVNRGNVSFNSLKYFVLDEADRMLDMGFLGD 329

Query: 683 LDMVISR--LPK--ERQILLFSATFP 748
           ++ ++S   +P   ERQ L+FSATFP
Sbjct: 330 VEEMLSHQSMPATGERQTLMFSATFP 355



 Score = 56.8 bits (131), Expect = 2e-10
 Identities = 23/62 (37%), Positives = 43/62 (69%)
 Frame = +3

Query: 30  FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
           FE   L+  LL  + + G+ KP+ IQ+ +IP+ LSG+D+++ A+ G+GKT A+ +P++  
Sbjct: 160 FETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSCAQTGSGKTAAFMLPIIHN 219

Query: 210 VI 215
           ++
Sbjct: 220 LL 221



 Score = 24.6 bits (51), Expect = 0.85
 Identities = 12/33 (36%), Positives = 21/33 (63%)
 Frame = +3

Query: 411 LIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
           +I+ PTRELA+Q +    + A ++ ++V V  G
Sbjct: 239 VIMSPTRELAIQIADQGKKFAYNSTVKVAVIYG 271


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 26.2 bits (55), Expect = 0.28
 Identities = 11/22 (50%), Positives = 15/22 (68%), Gaps = 1/22 (4%)
 Frame = -1

Query: 622 LIHFGHLLIHE-INHTPRCGNN 560
           +IH G  LI+   +H PRCGN+
Sbjct: 684 IIHVGTQLIYRPFSHFPRCGNH 705


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -1

Query: 565 NNHLYILINTHYIISKVCAPVVTITRMSVCFASSIQICDV 446
           +++LYIL   HY ++ V   + +   + +  +  + + DV
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDV 266


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 9/40 (22%), Positives = 21/40 (52%)
 Frame = -1

Query: 565 NNHLYILINTHYIISKVCAPVVTITRMSVCFASSIQICDV 446
           +++LYIL   HY ++ V   + +   + +  +  + + DV
Sbjct: 227 SDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDV 266


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 6/8 (75%), Positives = 7/8 (87%)
 Frame = +2

Query: 485  HSCNGYYR 508
            H+CN YYR
Sbjct: 1113 HNCNAYYR 1120


>AY337337-1|AAP94192.1|  505|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 505

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 11/48 (22%), Positives = 23/48 (47%)
 Frame = -1

Query: 598 IHEINHTPRCGNNHLYILINTHYIISKVCAPVVTITRMSVCFASSIQI 455
           + E+ +  RC    L +  + H+I  K+   +VT +   +  AS + +
Sbjct: 358 LQEMKYLERCVKEVLRLYPSVHFISRKLGEDLVTHSGHKLAKASIVNL 405


>AM292355-1|CAL23167.1|  324|Tribolium castaneum gustatory receptor
           candidate 34 protein.
          Length = 324

 Score = 21.4 bits (43), Expect = 7.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = -2

Query: 357 FNNYTVLF*NIVFFNQF 307
           FN +T+LF    FF QF
Sbjct: 69  FNFWTILFSRSDFFQQF 85


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 187,859
Number of Sequences: 336
Number of extensions: 4247
Number of successful extensions: 13
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 19923648
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)