Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00301
(748 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved ger... 125 4e-29
AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical... 72 4e-13
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 71 7e-13
Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein ( C.ele... 71 7e-13
U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation fact... 71 7e-13
AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical... 70 2e-12
AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical ... 70 2e-12
AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical ... 68 6e-12
AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical... 67 1e-11
AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical ... 67 1e-11
Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical pr... 66 2e-11
AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical ... 65 4e-11
AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and bel... 65 4e-11
AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and bel... 65 4e-11
AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and bel... 65 4e-11
AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical ... 65 6e-11
AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical ... 64 1e-10
EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein. 62 4e-10
CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical ... 62 4e-10
AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical ... 59 3e-09
Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical pr... 59 4e-09
Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical pr... 59 4e-09
U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA he... 59 4e-09
AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical ... 58 7e-09
Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical pr... 58 9e-09
AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA ... 58 9e-09
AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line hel... 58 9e-09
U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein. 54 1e-07
U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GL... 54 1e-07
AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line he... 54 1e-07
U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical p... 53 2e-07
AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical... 53 2e-07
AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical ... 53 2e-07
AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical ... 53 2e-07
Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical pr... 52 6e-07
U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase pr... 51 1e-06
L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase pr... 51 1e-06
AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line hel... 51 1e-06
Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical pr... 50 2e-06
AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA ... 50 2e-06
AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line hel... 50 2e-06
U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical pr... 44 1e-04
Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical pr... 40 0.002
AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical ... 40 0.002
U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical pr... 37 0.013
Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical p... 32 0.50
L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical pr... 31 1.1
AL117207-23|CAE18016.2| 66|Caenorhabditis elegans Hypothetical... 31 1.1
AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical ... 30 1.5
AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical ... 30 2.0
Z70750-8|CAA94743.1| 300|Caenorhabditis elegans Hypothetical pr... 29 3.5
U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical p... 29 3.5
U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical p... 29 3.5
Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical pr... 28 6.1
Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical pr... 28 8.1
Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical p... 28 8.1
U32305-4|AAK18861.1| 139|Caenorhabditis elegans Hypothetical pr... 28 8.1
>AC006605-1|AAK85443.1| 430|Caenorhabditis elegans Conserved
germline helicase protein1 protein.
Length = 430
Score = 125 bits (301), Expect = 4e-29
Identities = 54/67 (80%), Positives = 64/67 (95%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
DT+G EFE+FCL R+LLMGIFEKGWEKPSPIQEASI +AL+G+D+LARAKNGTGKTGAYC
Sbjct: 39 DTKGVEFEDFCLGRDLLMGIFEKGWEKPSPIQEASIGVALTGQDILARAKNGTGKTGAYC 98
Query: 192 IPVLEQV 212
IPV+E++
Sbjct: 99 IPVIEKI 105
Score = 122 bits (293), Expect = 4e-28
Identities = 55/80 (68%), Positives = 71/80 (88%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT+LRDDIMR+ V ++IATPGR++DLM+K VAKM+ C+ LVLDEADKLLSQDF+G+LD
Sbjct: 148 GTDLRDDIMRLNGTVHLVIATPGRILDLMEKGVAKMEHCKTLVLDEADKLLSQDFQGILD 207
Query: 689 MVISRLPKERQILLFSATFP 748
+I+ LPKERQ++L+SATFP
Sbjct: 208 RLINFLPKERQVMLYSATFP 227
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/43 (65%), Positives = 36/43 (83%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+ P IQA+++VPTRELALQTSQIC+EL+KH ++VMVTTG
Sbjct: 105 IQPALKAIQAMVIVPTRELALQTSQICVELSKHIQLKVMVTTG 147
>AC024859-14|AAY43989.1| 643|Caenorhabditis elegans Hypothetical
protein Y71H2AM.19 protein.
Length = 643
Score = 72.1 bits (169), Expect = 4e-13
Identities = 35/82 (42%), Positives = 55/82 (67%), Gaps = 4/82 (4%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N +D I ++ ++IATPGR+ID+MD+ + M+ CR LVLDEAD++L F+ + +
Sbjct: 290 NYKDQIHKLRLGCHILIATPGRLIDVMDQGLIGMEGCRYLVLDEADRMLDMGFEPQIRQI 349
Query: 695 I--SRLP--KERQILLFSATFP 748
+ +R+P +ER +FSATFP
Sbjct: 350 VECNRMPSKEERITAMFSATFP 371
Score = 49.6 bits (113), Expect = 2e-06
Identities = 19/62 (30%), Positives = 39/62 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + L + I G+++P+P+Q+ SIP G+D+++ A+ G+GKT A+ +P++
Sbjct: 168 FSDLSLHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSCAQTGSGKTAAFLVPLVNA 227
Query: 210 VI 215
++
Sbjct: 228 IL 229
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 71.3 bits (167), Expect = 7e-13
Identities = 32/84 (38%), Positives = 52/84 (61%)
Frame = +2
Query: 497 GYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
G +G RD + + V +++ATPGR++D +D M +C LVLDEAD++L F+
Sbjct: 239 GASKGPQARD----LERGVDIVVATPGRLLDFLDNGTTNMKKCSYLVLDEADRMLDMGFE 294
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
+ +I ++ +RQ L+FSAT+P
Sbjct: 295 PQIKKIIGQIRPDRQTLMFSATWP 318
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/62 (40%), Positives = 41/62 (66%)
Frame = +3
Query: 27 EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
EF E L ++ ++ K ++KP+ IQ S PIA+SG+D+++ AK G+GKT A+ +P L
Sbjct: 131 EFNEAPLPGQIHELLYGK-FQKPTVIQSISWPIAMSGRDIISIAKTGSGKTLAFMLPALV 189
Query: 207 QV 212
+
Sbjct: 190 HI 191
>Z12116-1|CAA78102.1| 402|Caenorhabditis elegans protein (
C.elegans mRNA for eIF-4A homologue. ).
Length = 402
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT++RDD ++ + V++ TPGR+ D++++ + +M VLDEAD++LS+ FK +
Sbjct: 134 GTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIY 193
Query: 689 MVISRLPKERQILLFSATFP 748
V +P++ Q++L SAT P
Sbjct: 194 EVFRSMPQDVQVVLLSATMP 213
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/61 (45%), Positives = 45/61 (73%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 210 V 212
+
Sbjct: 91 I 91
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ G
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
>U13876-3|AAA21170.1| 402|Caenorhabditis elegans Initiation factor
protein 1, isoforma protein.
Length = 402
Score = 71.3 bits (167), Expect = 7e-13
Identities = 30/80 (37%), Positives = 53/80 (66%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
GT++RDD ++ + V++ TPGR+ D++++ + +M VLDEAD++LS+ FK +
Sbjct: 134 GTSVRDDQRKLEAGIHVVVGTPGRVGDMINRNALDTSRIKMFVLDEADEMLSRGFKDQIY 193
Query: 689 MVISRLPKERQILLFSATFP 748
V +P++ Q++L SAT P
Sbjct: 194 EVFRSMPQDVQVVLLSATMP 213
Score = 64.1 bits (149), Expect = 1e-10
Identities = 28/61 (45%), Positives = 45/61 (73%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ LK ELL GI+ G+EKPS IQ+ +I +GKDV+A+A++GTGKT + + +L++
Sbjct: 31 FDDMELKEELLRGIYGFGFEKPSAIQKRAIVPCTTGKDVIAQAQSGTGKTATFSVSILQR 90
Query: 210 V 212
+
Sbjct: 91 I 91
Score = 33.5 bits (73), Expect = 0.16
Identities = 13/43 (30%), Positives = 26/43 (60%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+D + +QAL++ PTRELA Q ++ L ++ ++ ++ G
Sbjct: 91 IDHEDPHVQALVMAPTRELAQQIQKVMSALGEYLNVNILPCIG 133
>AC025726-23|AAK73934.1| 763|Caenorhabditis elegans Hypothetical
protein Y71G12B.8 protein.
Length = 763
Score = 70.1 bits (164), Expect = 2e-12
Identities = 33/69 (47%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Frame = +3
Query: 12 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
DT N FE+ L R++L G+ P+PIQ+A IP+AL+GKD+ A A GTGKT A+
Sbjct: 143 DTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATGTGKTAAF 202
Query: 189 CIPVLEQVI 215
+P+LE++I
Sbjct: 203 VLPILERMI 211
Score = 48.4 bits (110), Expect = 5e-06
Identities = 23/65 (35%), Positives = 39/65 (60%)
Frame = +2
Query: 548 NVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQIL 727
N++V TP +++ K+ ++LVLDEAD++L + F+ ++ +I + RQ L
Sbjct: 294 NIEVFFKTPNIPPKKNSRKICKIPNFQVLVLDEADRMLEEAFRDQMNELIRLCAQNRQTL 353
Query: 728 LFSAT 742
LFSAT
Sbjct: 354 LFSAT 358
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 405 QALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+ L++VPTRELA+Q Q+ +L+ + V + G
Sbjct: 221 RVLVLVPTRELAIQVFQVFRKLSTFIQLEVCLCAG 255
>AC024753-1|AAF60456.1| 732|Caenorhabditis elegans Hypothetical
protein Y23H5B.6 protein.
Length = 732
Score = 69.7 bits (163), Expect = 2e-12
Identities = 37/92 (40%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDE 646
G H SC G+++ + RI + +I+ TPGR++ MD+ D ++LVLDE
Sbjct: 172 GAHHGFSCGLVIGGSDVAFERNRI-SGINIIVCTPGRLLQHMDENAQMSCDSLQVLVLDE 230
Query: 647 ADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
AD++L F L+ +I+ LP ERQ LLFSAT
Sbjct: 231 ADRMLDMGFSKQLNSIINNLPAERQTLLFSAT 262
Score = 53.6 bits (123), Expect = 1e-07
Identities = 27/59 (45%), Positives = 37/59 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
FE+F L L G+ + + KP+ IQ +I +L+G DV+ AK G+GKT A IPVLE
Sbjct: 78 FEDFPLSWRTLEGLKDNDYTKPTEIQRDTIAYSLTGSDVVGAAKTGSGKTLALVIPVLE 136
>AC006665-5|AAF39907.1| 630|Caenorhabditis elegans Hypothetical
protein H27M09.1 protein.
Length = 630
Score = 68.1 bits (159), Expect = 6e-12
Identities = 28/80 (35%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + + + +++ATPGR+ D++ K++ ++ CR LVLDEAD++L F+ +
Sbjct: 309 GVPIGEQAKDVRDGIHIVVATPGRLSDMLTKKIINLEVCRYLVLDEADRMLDMGFEDEIK 368
Query: 689 MVISRLPKERQILLFSATFP 748
+ +RQ LLFSAT P
Sbjct: 369 SIFYFFKAQRQTLLFSATMP 388
Score = 42.7 bits (96), Expect = 3e-04
Identities = 18/43 (41%), Positives = 29/43 (67%)
Frame = +3
Query: 75 EKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+KG P+ IQ IP+ALSG+D++ A G+GKT + +P++
Sbjct: 207 QKGIVTPTAIQIQGIPVALSGRDMIGIASTGSGKTMTFVLPLV 249
>AF039720-12|AAB96704.1| 399|Caenorhabditis elegans Hypothetical
protein F33D11.10 protein.
Length = 399
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
H+C G GTNL +DI ++ V+ TPGR+ D++ ++ + ++LVLDEAD++L+
Sbjct: 126 HACIG---GTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182
Query: 665 QDFKGMLDMVISRLPKERQILLFSATFP 748
+ FK L + LP Q++L SAT P
Sbjct: 183 KGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Score = 64.1 bits (149), Expect = 1e-10
Identities = 27/61 (44%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L+ +LL GI+ G+EKPS IQ+ ++P L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAVPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 210 V 212
+
Sbjct: 88 L 88
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+D + QALI+ PTRELA+Q ++ + L + +++ G
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIG 130
>AC024844-2|AAK29954.2| 399|Caenorhabditis elegans Hypothetical
protein Y65B4A.6 protein.
Length = 399
Score = 67.3 bits (157), Expect = 1e-11
Identities = 34/88 (38%), Positives = 54/88 (61%)
Frame = +2
Query: 485 HSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
H+C G GTNL +DI ++ V+ TPGR+ D++ ++ + ++LVLDEAD++L+
Sbjct: 126 HACIG---GTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRAIKLLVLDEADEMLN 182
Query: 665 QDFKGMLDMVISRLPKERQILLFSATFP 748
+ FK L + LP Q++L SAT P
Sbjct: 183 KGFKEQLYDIYRYLPPGAQVVLLSATLP 210
Score = 64.5 bits (150), Expect = 8e-11
Identities = 28/61 (45%), Positives = 44/61 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F++ L+ +LL GI+ G+EKPS IQ+ +IP L +DV+A+A++GTGKT + I VL+
Sbjct: 28 FDKMGLREDLLRGIYAYGFEKPSAIQQRAIPAILKARDVIAQAQSGTGKTATFSISVLQS 87
Query: 210 V 212
+
Sbjct: 88 L 88
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/43 (32%), Positives = 25/43 (58%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
+D + QALI+ PTRELA+Q ++ + L + +++ G
Sbjct: 88 LDTQVRETQALILSPTRELAVQIQKVVLALGDYMNVQCHACIG 130
>Z29115-1|CAA82362.1| 489|Caenorhabditis elegans Hypothetical
protein T26G10.1 protein.
Length = 489
Score = 66.1 bits (154), Expect = 2e-11
Identities = 30/68 (44%), Positives = 43/68 (63%)
Frame = +3
Query: 12 DTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYC 191
D + F E + + L GW KPS IQ+A++P AL GKDV+ A+ G+GKTGA+
Sbjct: 40 DVKEKSFAELGVSQPLCDACQRLGWMKPSKIQQAALPHALQGKDVIGLAETGSGKTGAFA 99
Query: 192 IPVLEQVI 215
IPVL+ ++
Sbjct: 100 IPVLQSLL 107
Score = 62.5 bits (145), Expect = 3e-10
Identities = 27/79 (34%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVA-KMDQCRMLVLDEADKLLSQDFKGML 685
G ++ M + + +I+ATPGR++D ++ + + L++DEAD++L+ DF+ L
Sbjct: 149 GVDMAAQAMALARRPHIIVATPGRLVDHLENTKGFNLKALKFLIMDEADRILNMDFEVEL 208
Query: 686 DMVISRLPKERQILLFSAT 742
D ++ +P+ER+ LFSAT
Sbjct: 209 DKILKVIPRERRTYLFSAT 227
>AC024876-4|AAU05555.1| 825|Caenorhabditis elegans Hypothetical
protein Y94H6A.5a protein.
Length = 825
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + I++N +++ATPGR++ ++ + ++ + +V DEAD+L F+ L
Sbjct: 130 GDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLT 189
Query: 689 MVISRLPKERQILLFSATFP 748
+ R+P+ RQ LLFSAT P
Sbjct: 190 ETLKRIPESRQTLLFSATLP 209
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
R + +++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A
Sbjct: 18 RKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAA 77
Query: 186 YCIPVLEQV 212
+ IP+L+++
Sbjct: 78 FVIPMLQKL 86
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 390 KKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
++DT I+AL+V PTRELALQT ++ EL + T +R G E
Sbjct: 88 RRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIE 134
>AC024876-3|AAU05556.1| 871|Caenorhabditis elegans Hypothetical
protein Y94H6A.5b protein.
Length = 871
Score = 65.3 bits (152), Expect = 4e-11
Identities = 27/80 (33%), Positives = 48/80 (60%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + + I++N +++ATPGR++ ++ + ++ + +V DEAD+L F+ L
Sbjct: 130 GDQIEEQFSTIHENPDILLATPGRLLHVIVEMDLRLSYVQYVVFDEADRLFEMGFQDQLT 189
Query: 689 MVISRLPKERQILLFSATFP 748
+ R+P+ RQ LLFSAT P
Sbjct: 190 ETLKRIPESRQTLLFSATLP 209
Score = 57.6 bits (133), Expect = 9e-09
Identities = 24/69 (34%), Positives = 44/69 (63%)
Frame = +3
Query: 6 RADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGA 185
R + +++ L + I +KG+ +P+PIQ +IP + GKDV+A ++ G+GKT A
Sbjct: 18 RKHKKAGGWQQIGLDHSVYKAIEKKGFNQPTPIQRKTIPCIMDGKDVVAMSRTGSGKTAA 77
Query: 186 YCIPVLEQV 212
+ IP+L+++
Sbjct: 78 FVIPMLQKL 86
Score = 39.1 bits (87), Expect = 0.003
Identities = 21/47 (44%), Positives = 29/47 (61%), Gaps = 2/47 (4%)
Frame = +3
Query: 390 KKDT--IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFE 524
++DT I+AL+V PTRELALQT ++ EL + T +R G E
Sbjct: 88 RRDTTGIRALMVSPTRELALQTFKVVKELGRFTGLRCACLVGGDQIE 134
>AC024810-3|AAU20831.1| 660|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform c protein.
Length = 660
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N RD + R+ ++IATPGR+ID++++ + CR LVLDEAD++L F+ + +
Sbjct: 262 NYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 321
Query: 695 ISR-LPKE--RQILLFSATFP 748
+ + +P + R +FSATFP
Sbjct: 322 VGQGMPPKTARTTAMFSATFP 342
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 141 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 200
Query: 210 VI 215
++
Sbjct: 201 IL 202
>AC024810-2|AAK68520.1| 644|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform b protein.
Length = 644
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N RD + R+ ++IATPGR+ID++++ + CR LVLDEAD++L F+ + +
Sbjct: 246 NYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 305
Query: 695 ISR-LPKE--RQILLFSATFP 748
+ + +P + R +FSATFP
Sbjct: 306 VGQGMPPKTARTTAMFSATFP 326
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 125 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 184
Query: 210 VI 215
++
Sbjct: 185 IL 186
>AC024810-1|AAF60764.1| 641|Caenorhabditis elegans Vasa- and
belle-like helicase protein1, isoform a protein.
Length = 641
Score = 65.3 bits (152), Expect = 4e-11
Identities = 31/81 (38%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Frame = +2
Query: 515 NLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMV 694
N RD + R+ ++IATPGR+ID++++ + CR LVLDEAD++L F+ + +
Sbjct: 243 NYRDQVNRLRAGTHILIATPGRLIDIIEQGFIGLAGCRYLVLDEADRMLDMGFEPQIRKI 302
Query: 695 ISR-LPKE--RQILLFSATFP 748
+ + +P + R +FSATFP
Sbjct: 303 VGQGMPPKTARTTAMFSATFP 323
Score = 52.0 bits (119), Expect = 4e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E ++ + G+ KP+P+Q+ SIP L+ +D+++ A+ G+GKT A+ +P+++
Sbjct: 122 FNEAGFGPAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTAAFLLPIIQH 181
Query: 210 VI 215
++
Sbjct: 182 IL 183
>AF025451-3|AAB71200.2| 634|Caenorhabditis elegans Hypothetical
protein C24H12.4a protein.
Length = 634
Score = 64.9 bits (151), Expect = 6e-11
Identities = 27/62 (43%), Positives = 44/62 (70%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F +F L +L I E GWEK + +QE+ I +AL K+++ RA+ G+GKTGA+ IP++++
Sbjct: 91 FADFGLDERILKSIGELGWEKANQVQESVISLALENKNIMGRARTGSGKTGAFLIPLVQK 150
Query: 210 VI 215
+I
Sbjct: 151 LI 152
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
V++ TPG+++ + + LV+DEAD LLS ++ + + S+LP Q L+ S
Sbjct: 216 VVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTS 275
Query: 737 AT 742
AT
Sbjct: 276 AT 277
>AF045641-1|AAK68386.1| 970|Caenorhabditis elegans Hypothetical
protein F53H1.1 protein.
Length = 970
Score = 63.7 bits (148), Expect = 1e-10
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRM---LVLDEADKLLSQDF 673
Y G + + I + + ++++ TPGRMID++ K+ R LVLDEAD++ + F
Sbjct: 412 YGGVGISEQIADLKRGAEIVVCTPGRMIDVLAANSGKVTNLRRVTYLVLDEADRMFDKGF 471
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + V++ + ++Q +LFSATFP
Sbjct: 472 EPQIMKVVNNIRPDKQTVLFSATFP 496
Score = 46.4 bits (105), Expect = 2e-05
Identities = 20/53 (37%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Frame = +3
Query: 60 LMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
+M + +K + KP+ IQ +IP +SG+DV+ AK G+GKT A+ +P+ ++
Sbjct: 315 MMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAFLLPMFRHIL 367
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 408 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
A+I+ PTRELA+QT + + AK ++V T G
Sbjct: 380 AVILAPTRELAMQTYKEANKFAKPLGLKVACTYG 413
>EU051652-1|ABS85191.1| 973|Caenorhabditis elegans MEL-46 protein.
Length = 973
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +2
Query: 554 QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
Q++I TPGR+ L+ M VLDEADKL+ + F+ ++++I+ LP+ RQ+ +F
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 734 SATFP 748
SAT+P
Sbjct: 202 SATYP 206
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 189 CIPVLEQV 212
+ +E +
Sbjct: 77 SVLAVENL 84
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFEM 527
+D + IQ +IV PTRE+++Q + ++A T R V G ++
Sbjct: 84 LDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKL 131
>CU457744-1|CAM36366.2| 973|Caenorhabditis elegans Hypothetical
protein T06A10.1 protein.
Length = 973
Score = 62.1 bits (144), Expect = 4e-10
Identities = 27/65 (41%), Positives = 43/65 (66%)
Frame = +2
Query: 554 QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLF 733
Q++I TPGR+ L+ M VLDEADKL+ + F+ ++++I+ LP+ RQ+ +F
Sbjct: 142 QIVIGTPGRIAQLVKLGAMNMSHVDFFVLDEADKLMDEVFRDDINIIINSLPQIRQVAVF 201
Query: 734 SATFP 748
SAT+P
Sbjct: 202 SATYP 206
Score = 51.2 bits (117), Expect = 8e-07
Identities = 23/68 (33%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Frame = +3
Query: 12 DTRGN-EFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
D + N FE + ++ L + +++PSP+Q +IP+ L G+D+L +AK+GTGKT +
Sbjct: 17 DVQSNCTFESLMIGQKTLERLKNSQFDRPSPVQARAIPVGLLGRDMLVQAKSGTGKTLVF 76
Query: 189 CIPVLEQV 212
+ +E +
Sbjct: 77 SVLAVENL 84
Score = 28.7 bits (61), Expect = 4.6
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = +3
Query: 381 VDPKKDTIQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQTFEM 527
+D + IQ +IV PTRE+++Q + ++A T R V G ++
Sbjct: 84 LDSRSSHIQKVIVTPTREISVQIKETVRKVAP-TGARTSVYVGGSAHKL 131
>AL034488-3|CAA22456.1| 504|Caenorhabditis elegans Hypothetical
protein Y54G11A.3 protein.
Length = 504
Score = 59.3 bits (137), Expect = 3e-09
Identities = 31/98 (31%), Positives = 54/98 (55%), Gaps = 5/98 (5%)
Frame = +2
Query: 470 GKTHRHSCNGY-----YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRML 634
G+ ++S NGY Y G + + + V+++IATPGR+ DL + V + +
Sbjct: 181 GEVKKYSYNGYKSVCLYGGGSRPEQVEACRGGVEIVIATPGRLTDLSNDGVISLASVTYV 240
Query: 635 VLDEADKLLSQDFKGMLDMVISRLPKERQILLFSATFP 748
VLDEAD++L F+ + ++ + +R + L SAT+P
Sbjct: 241 VLDEADRMLDMGFEVAIRRILFEIRPDRLVALTSATWP 278
Score = 51.6 bits (118), Expect = 6e-07
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEK-GWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPV 200
N FE+ +MG K G+EKPSPIQ P+ LSG+D + ++ G+GKT A+ +P
Sbjct: 83 NSFEQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQTGSGKTLAFLLPA 142
Query: 201 L 203
L
Sbjct: 143 L 143
>Z54327-7|CAD57690.1| 268|Caenorhabditis elegans Hypothetical
protein C26D10.2b protein.
Length = 268
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +3
Query: 9 ADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
A + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK+G GKT +
Sbjct: 36 ASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVF 95
Query: 189 CIPVLEQV 212
I L+Q+
Sbjct: 96 VITTLQQL 103
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQ-DF 673
++ G ++ D R+ + +++ TPGRM+ L K+D+ + VLDE DK++ D
Sbjct: 144 FFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADM 203
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + ++ P+++Q+++FSAT P
Sbjct: 204 RRDVQEIVKMTPQQKQVMMFSATLP 228
>Z54327-6|CAA91120.1| 425|Caenorhabditis elegans Hypothetical
protein C26D10.2a protein.
Length = 425
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +3
Query: 9 ADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
A + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK+G GKT +
Sbjct: 36 ASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVF 95
Query: 189 CIPVLEQV 212
I L+Q+
Sbjct: 96 VITTLQQL 103
Score = 56.8 bits (131), Expect = 2e-08
Identities = 25/85 (29%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQ-DF 673
++ G ++ D R+ + +++ TPGRM+ L K+D+ + VLDE DK++ D
Sbjct: 144 FFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADM 203
Query: 674 KGMLDMVISRLPKERQILLFSATFP 748
+ + ++ P+++Q+++FSAT P
Sbjct: 204 RRDVQEIVKMTPQQKQVMMFSATLP 228
>U13070-1|AAK67224.1| 730|Caenorhabditis elegans Hypothetical
protein F01F1.7 protein.
Length = 730
Score = 58.8 bits (136), Expect = 4e-09
Identities = 23/67 (34%), Positives = 44/67 (65%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLD 688
G + D M++ V+V+IATPGR++D+++ + ++QC ++LDEAD++L F+ +
Sbjct: 415 GASREDQGMKLRMGVEVVIATPGRLLDVLENRYLLLNQCTYVILDEADRMLDMGFEPDVQ 474
Query: 689 MVISRLP 709
V+ +P
Sbjct: 475 KVLEYMP 481
Score = 51.6 bits (118), Expect = 6e-07
Identities = 23/58 (39%), Positives = 37/58 (63%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
+EE E+ + E G+ +P+PIQ +IPI L +DV+ A+ G+GKT A+ +P+L
Sbjct: 303 WEEAGFPDEVYQAVKEIGYLEPTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLL 360
>U08102-1|AAB65852.1| 417|Caenorhabditis elegans putative RNA
helicase protein.
Length = 417
Score = 58.8 bits (136), Expect = 4e-09
Identities = 28/68 (41%), Positives = 41/68 (60%)
Frame = +3
Query: 9 ADTRGNEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAY 188
A + F +F LK E+L I + G+E PS +Q IP A+ G DV+ +AK+G GKT +
Sbjct: 35 ASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVF 94
Query: 189 CIPVLEQV 212
I L+Q+
Sbjct: 95 VITTLQQL 102
Score = 44.8 bits (101), Expect = 7e-05
Identities = 26/84 (30%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Frame = +2
Query: 500 YYRGTNLRDDIMRIYQNV-QVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK 676
++ G ++ D R+ + +++ TPGRM+ L K+D+ + VLDE DK++
Sbjct: 143 FFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMI----- 197
Query: 677 GMLDMVISRLPKERQILLFSATFP 748
G DM + + +Q+++FSAT P
Sbjct: 198 GDADM-RRDVQEIKQVMMFSATLP 220
>AF067608-1|AAC17654.2| 544|Caenorhabditis elegans Hypothetical
protein B0511.6 protein.
Length = 544
Score = 58.0 bits (134), Expect = 7e-09
Identities = 28/79 (35%), Positives = 50/79 (63%), Gaps = 1/79 (1%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMID-LMDKQVAKMDQCRMLVLDEADKLLSQDFKGML 685
G+N + ++ + V +++ATPGR++D L + + + L++DEAD++L F+ +
Sbjct: 177 GSNRSAEKDKLAKGVSILVATPGRLLDHLQNTDNFLVRNMKCLIIDEADRILDIGFEIEM 236
Query: 686 DMVISRLPKERQILLFSAT 742
V+ LPK+RQ +LFSAT
Sbjct: 237 QQVLRHLPKQRQSMLFSAT 255
Score = 43.6 bits (98), Expect = 2e-04
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +3
Query: 57 LLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLE 206
LL + G+ + IQ SI L GKDVLA AK G+GKT A+ +P +E
Sbjct: 79 LLKAVQGLGFTTMTEIQAKSIDPLLEGKDVLASAKTGSGKTLAFLLPAIE 128
>Z81449-4|CAB03765.1| 811|Caenorhabditis elegans Hypothetical
protein C46F11.4 protein.
Length = 811
Score = 57.6 bits (133), Expect = 9e-09
Identities = 27/62 (43%), Positives = 39/62 (62%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F F + L+ I + +E+P+PIQ +IP ALSG+DVL AK G+GKT AY P +
Sbjct: 267 FAHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIAKTGSGKTAAYLWPAIVH 326
Query: 210 VI 215
++
Sbjct: 327 IM 328
Score = 52.4 bits (120), Expect = 3e-07
Identities = 22/67 (32%), Positives = 38/67 (56%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQI 724
+ ++++ TPGR+IDL+ + LV DEAD++ F+ + + + +RQ
Sbjct: 388 EGAEMVVCTPGRIIDLVKMGATNFLRTTFLVFDEADRMFDMGFEAQVKSISDHVRPDRQC 447
Query: 725 LLFSATF 745
L+FSATF
Sbjct: 448 LMFSATF 454
Score = 27.9 bits (59), Expect = 8.1
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = +3
Query: 408 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
A+IVVPTRELA+Q Q + K +I + G
Sbjct: 341 AVIVVPTRELAIQVFQEAKKFCKVYNINPICAYG 374
>AF079509-1|AAC28388.1| 720|Caenorhabditis elegans germline RNA
helicase-3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 9e-09
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKG 679
Y G N+ + +I + +I+ T GR+ + K+D+CR LVLDEAD+++ S F
Sbjct: 410 YGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGP 469
Query: 680 MLDMVIS--RLPK--ERQILLFSATFP 748
++ +I+ +PK +RQ ++FSATFP
Sbjct: 470 EIEQIINYKNMPKNDKRQTMMFSATFP 496
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 210 VI 215
+I
Sbjct: 360 LI 361
>AF003145-4|AAB57719.1| 720|Caenorhabditis elegans Germ-line
helicase protein 3 protein.
Length = 720
Score = 57.6 bits (133), Expect = 9e-09
Identities = 32/87 (36%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKG 679
Y G N+ + +I + +I+ T GR+ + K+D+CR LVLDEAD+++ S F
Sbjct: 410 YGGINVGYNKSQIMKGCTIIVGTIGRVKHFCEDGAIKLDKCRYLVLDEADRMIDSMGFGP 469
Query: 680 MLDMVIS--RLPK--ERQILLFSATFP 748
++ +I+ +PK +RQ ++FSATFP
Sbjct: 470 EIEQIINYKNMPKNDKRQTMMFSATFP 496
Score = 51.6 bits (118), Expect = 6e-07
Identities = 19/62 (30%), Positives = 40/62 (64%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + + + + + G+ + +PIQ+ ++P+ GKD+LA A+ G+GKT A+ +P++ +
Sbjct: 300 FSDSDIPQSMRRNVERAGYTRTTPIQQYTLPLVADGKDILACAQTGSGKTAAFLLPIMSR 359
Query: 210 VI 215
+I
Sbjct: 360 LI 361
>U60449-1|AAB03510.1| 974|Caenorhabditis elegans GLH-2 protein.
Length = 974
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F +D +++ +
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 707 PKE--RQILLFSATFP 748
PK+ RQ L+FSATFP
Sbjct: 735 PKKENRQTLMFSATFP 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 210 VI 215
+I
Sbjct: 614 LI 615
>U60194-1|AAB03337.1| 974|Caenorhabditis elegans RNA helicase GLH-2
protein.
Length = 974
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F +D +++ +
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 707 PKE--RQILLFSATFP 748
PK+ RQ L+FSATFP
Sbjct: 735 PKKENRQTLMFSATFP 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 210 VI 215
+I
Sbjct: 614 LI 615
>AC006625-11|AAK68269.1| 974|Caenorhabditis elegans Germ-line
helicase protein 2 protein.
Length = 974
Score = 53.6 bits (123), Expect = 1e-07
Identities = 28/76 (36%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F +D +++ +
Sbjct: 675 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIDTIVNYESM 734
Query: 707 PKE--RQILLFSATFP 748
PK+ RQ L+FSATFP
Sbjct: 735 PKKENRQTLMFSATFP 750
Score = 49.2 bits (112), Expect = 3e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 554 FSEANLGETMKKNVAHAGYTKTTPIQQYTLPLIHQGHDIMACAQTGSGKTAAFLLPIMAR 613
Query: 210 VI 215
+I
Sbjct: 614 LI 615
>U13876-12|AAA21169.1| 363|Caenorhabditis elegans Hypothetical
protein F57B9.3 protein.
Length = 363
Score = 53.2 bits (122), Expect = 2e-07
Identities = 25/58 (43%), Positives = 39/58 (67%)
Frame = +3
Query: 45 LKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVIC 218
LK ELL GI+ G+EKPS IQ++++ +GKDV +++ G+GKT I +L+ + C
Sbjct: 3 LKEELLRGIYGFGFEKPSAIQKSAVAPCTTGKDVTIQSQAGSGKTVISLIDILQGIDC 60
Score = 45.2 bits (102), Expect = 5e-05
Identities = 23/64 (35%), Positives = 38/64 (59%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
V++ TP D + + + +M VLDEAD++LS+ FK + V +P++ Q++L S
Sbjct: 112 VLMGTPK---DFLSNIPSDTSRIKMFVLDEADEMLSKGFKDQIYEVFRSMPQDVQVVLLS 168
Query: 737 ATFP 748
AT P
Sbjct: 169 ATMP 172
>AC024830-10|AAF59610.3| 728|Caenorhabditis elegans Hypothetical
protein Y55F3BR.1 protein.
Length = 728
Score = 52.8 bits (121), Expect = 2e-07
Identities = 24/61 (39%), Positives = 35/61 (57%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FEEF + EL + W P+ +Q +IP L G D L A+ G+GKTGA+ +P+ +
Sbjct: 4 FEEFGIIPELSDALSSLNWTLPTAVQSEAIPAILGGADALIAAETGSGKTGAFSLPIAQI 63
Query: 210 V 212
V
Sbjct: 64 V 64
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/52 (23%), Positives = 25/52 (48%)
Frame = +2
Query: 509 GTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS 664
G N+ + + +++ TP R+ DL+ + +V+DE D+ L+
Sbjct: 321 GENMNQILRTLETGCDIVVGTPSRVFDLIHTGKLATKNLQFVVIDEIDQFLA 372
>AC006661-5|AAF39890.2| 488|Caenorhabditis elegans Hypothetical
protein H20J04.4a protein.
Length = 488
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQ---VAKM-DQCRMLV 637
GK C+ G +L + + V++ATPGR+ DL++ +AK+ + + V
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFV 240
Query: 638 LDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
LDEAD++L + L + + ++RQ LL SAT
Sbjct: 241 LDEADRMLEGQYNDQLKPIFESISEKRQTLLLSAT 275
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3
Query: 96 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL 151
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQT 518
I ALI+ PTRELA Q ++ L K ++ V G ++
Sbjct: 158 IYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
>AC006661-4|ABB88208.1| 561|Caenorhabditis elegans Hypothetical
protein H20J04.4b protein.
Length = 561
Score = 52.8 bits (121), Expect = 2e-07
Identities = 30/95 (31%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Frame = +2
Query: 470 GKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQ---VAKM-DQCRMLV 637
GK C+ G +L + + V++ATPGR+ DL++ +AK+ + + V
Sbjct: 181 GKPITLKCSVIVGGRSLIHQARELSERPHVVVATPGRLADLIESDPDTIAKVFKKIQFFV 240
Query: 638 LDEADKLLSQDFKGMLDMVISRLPKERQILLFSAT 742
LDEAD++L + L + + ++RQ LL SAT
Sbjct: 241 LDEADRMLEGQYNDQLKPIFESISEKRQTLLLSAT 275
Score = 45.6 bits (103), Expect = 4e-05
Identities = 19/39 (48%), Positives = 28/39 (71%)
Frame = +3
Query: 96 SPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
+P+Q A IP L G D+L A+ GTGKT A+ IP+L+++
Sbjct: 113 TPVQAACIPKILEGSDILGCARTGTGKTLAFAIPILQKL 151
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/39 (38%), Positives = 22/39 (56%)
Frame = +3
Query: 402 IQALIVVPTRELALQTSQICIELAKHTDIRVMVTTGAQT 518
I ALI+ PTRELA Q ++ L K ++ V G ++
Sbjct: 158 IYALILTPTRELAFQIAEQFTALGKPITLKCSVIVGGRS 196
>Z22177-1|CAA80151.1| 578|Caenorhabditis elegans Hypothetical
protein ZK512.2 protein.
Length = 578
Score = 51.6 bits (118), Expect = 6e-07
Identities = 25/70 (35%), Positives = 44/70 (62%), Gaps = 4/70 (5%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQ----VAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPK 712
+NV +++ATPGR+ ++ + KM ++LV+DEAD+ F+ + ++S +PK
Sbjct: 130 KNVNILVATPGRLFQIIQHEKTLIARKMRTLQLLVIDEADRFNEIQFEDHMREILSCIPK 189
Query: 713 ERQILLFSAT 742
+R+ LFSAT
Sbjct: 190 QRRTGLFSAT 199
Score = 32.7 bits (71), Expect = 0.28
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = +3
Query: 60 LMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
L+ +F+K ++ + +Q S L+ DV+ + G+GKT A+ +P++ +
Sbjct: 21 LLEVFDKSYKSFTDVQVLSGTHLLNLSDVVVESPTGSGKTLAFVLPMMRMI 71
>U62772-1|AAB04136.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F ++ +++ +
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 707 PKE--RQILLFSATFP 748
P++ RQ L+FSATFP
Sbjct: 524 PRKENRQTLMFSATFP 539
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 210 VI 215
+I
Sbjct: 403 LI 404
>L19948-1|AAC27384.1| 763|Caenorhabditis elegans RNA helicase
protein.
Length = 763
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F ++ +++ +
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 707 PKE--RQILLFSATFP 748
P++ RQ L+FSATFP
Sbjct: 524 PRKENRQTLMFSATFP 539
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 210 VI 215
+I
Sbjct: 403 LI 404
>AF000197-1|AAB52901.2| 763|Caenorhabditis elegans Germ-line
helicase protein 1 protein.
Length = 763
Score = 50.8 bits (116), Expect = 1e-06
Identities = 26/76 (34%), Positives = 48/76 (63%), Gaps = 5/76 (6%)
Frame = +2
Query: 536 RIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL-SQDFKGMLDMVIS--RL 706
+I + +I+ T GR+ ++ K+D+CR VLDEAD+++ + F ++ +++ +
Sbjct: 464 QIEKGATIIVGTVGRIKHFCEEGTIKLDKCRFFVLDEADRMIDAMGFGTDIETIVNYDSM 523
Query: 707 PKE--RQILLFSATFP 748
P++ RQ L+FSATFP
Sbjct: 524 PRKENRQTLMFSATFP 539
Score = 49.6 bits (113), Expect = 2e-06
Identities = 20/62 (32%), Positives = 38/62 (61%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F E L + + G+ K +PIQ+ ++P+ G D++A A+ G+GKT A+ +P++ +
Sbjct: 343 FAEANLTETMQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSGKTAAFLLPIMTR 402
Query: 210 VI 215
+I
Sbjct: 403 LI 404
>Z75546-3|CAA99891.1| 581|Caenorhabditis elegans Hypothetical
protein R05D11.4 protein.
Length = 581
Score = 50.0 bits (114), Expect = 2e-06
Identities = 23/62 (37%), Positives = 37/62 (59%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
F + + LL + E +PSPIQ SIP ++VLA A G+GKT A+ +PV+++
Sbjct: 128 FSDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFALPVIDE 187
Query: 210 VI 215
++
Sbjct: 188 IL 189
Score = 31.9 bits (69), Expect = 0.50
Identities = 23/74 (31%), Positives = 38/74 (51%), Gaps = 7/74 (9%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLL----SQD--FKGMLDMVISRL 706
Q+ ++++TP R++ +DK R LV+DE+D+L QD F+ L +
Sbjct: 246 QHADILVSTPNRIVFHLDK--IDTSSLRWLVVDESDRLFEVVEGQDKCFRNQLAAIYKAC 303
Query: 707 -PKERQILLFSATF 745
K ++ FSATF
Sbjct: 304 DAKCTRVAFFSATF 317
>AF079508-1|AAC28387.1| 1156|Caenorhabditis elegans germline RNA
helicase-4 protein.
Length = 1156
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +2
Query: 461 Y*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVL 640
Y TG + GY R N++ +R + + +++AT GR+ D ++ + + + +VL
Sbjct: 839 YETGLKCGLAFGGYSRNANVQH--LRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 641 DEADKLL-SQDFKGMLDMVISRLPKER--QILLFSATF 745
DEAD+++ S DF + +I P ER Q +LFSA+F
Sbjct: 897 DEADRMVDSNDFGEEVSKIIGS-PGERTQQTVLFSASF 933
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 90 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
+P+PIQ AS + G DV+A A G+GKT A+ IP
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
>AF039718-2|AAB96745.2| 1156|Caenorhabditis elegans Germ-line helicase
protein 4 protein.
Length = 1156
Score = 50.0 bits (114), Expect = 2e-06
Identities = 32/98 (32%), Positives = 55/98 (56%), Gaps = 3/98 (3%)
Frame = +2
Query: 461 Y*TGKTHRHSCNGYYRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVL 640
Y TG + GY R N++ +R + + +++AT GR+ D ++ + + + +VL
Sbjct: 839 YETGLKCGLAFGGYSRNANVQH--LRSFSQLNILVATMGRLQDFVNAGEVSLSKMKYIVL 896
Query: 641 DEADKLL-SQDFKGMLDMVISRLPKER--QILLFSATF 745
DEAD+++ S DF + +I P ER Q +LFSA+F
Sbjct: 897 DEADRMVDSNDFGEEVSKIIGS-PGERTQQTVLFSASF 933
Score = 37.9 bits (84), Expect = 0.008
Identities = 18/36 (50%), Positives = 24/36 (66%)
Frame = +3
Query: 90 KPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIP 197
+P+PIQ AS + G DV+A A G+GKT A+ IP
Sbjct: 758 RPTPIQRASFFPIMHGNDVVACAHTGSGKTLAFLIP 793
>U80447-1|AAB37806.1| 746|Caenorhabditis elegans Hypothetical
protein F55F8.2a protein.
Length = 746
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Frame = +3
Query: 39 FCLKRELLMGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLEQVI 215
+ L E+L I + G+ +P+ IQ A +P A+ + DVL A+ G+GKT A+ IP++ +++
Sbjct: 160 YFLPNEVLEAIEQMGFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 219
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQ-----VAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLP 709
Q +++ATPGR+ +M + +A+ + LV+DE D+++ + + L +++++
Sbjct: 285 QRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIH 344
Query: 710 KER-----QILLFSAT 742
+E Q L+FSAT
Sbjct: 345 EESEKEKLQTLVFSAT 360
>Z50071-3|CAA90407.1| 613|Caenorhabditis elegans Hypothetical
protein T07D4.4c protein.
Length = 613
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 197
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 209 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 268
Query: 198 VL 203
+L
Sbjct: 269 ML 270
>Z50071-2|CAA90406.1| 638|Caenorhabditis elegans Hypothetical
protein T07D4.4b protein.
Length = 638
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 197
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 234 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 293
Query: 198 VL 203
+L
Sbjct: 294 ML 295
>Z50071-1|CAA90408.1| 1022|Caenorhabditis elegans Hypothetical
protein T07D4.4a protein.
Length = 1022
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 2/62 (3%)
Frame = +3
Query: 24 NEFEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSG--KDVLARAKNGTGKTGAYCIP 197
+ F E LK E+L + ++ P+ IQE ++P+ L +++A+A++GTGKT A+ +
Sbjct: 618 SSFRELRLKPEVLKALDTMNFQFPTRIQETALPLLLMEPPSNLIAQAQSGTGKTAAFVLT 677
Query: 198 VL 203
+L
Sbjct: 678 ML 679
>Z81094-7|CAB03153.2| 960|Caenorhabditis elegans Hypothetical
protein F58G11.2 protein.
Length = 960
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/38 (42%), Positives = 26/38 (68%)
Frame = +3
Query: 102 IQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQVI 215
IQ A IP L G DVL +A+ GKT A+ +P++++++
Sbjct: 407 IQGAMIPQVLDGHDVLGQAETSAGKTAAFGLPIIDKIL 444
Score = 34.7 bits (76), Expect = 0.070
Identities = 28/78 (35%), Positives = 37/78 (47%), Gaps = 9/78 (11%)
Frame = +2
Query: 539 IYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFK----GMLDMVIS-- 700
I ++I T GR++D K + R LV DEAD+LL QD K G L +I
Sbjct: 506 IRNGCDILIGTCGRIMDFTVKSHISLLHLRFLVFDEADRLL-QDMKKDPLGHLGAIIKDA 564
Query: 701 ---RLPKERQILLFSATF 745
RQ ++ SATF
Sbjct: 565 GFMESAATRQTIMTSATF 582
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/34 (44%), Positives = 22/34 (64%)
Frame = +3
Query: 408 ALIVVPTRELALQTSQICIELAKHTDIRVMVTTG 509
ALI+ PTRELA Q + ++TDI V+++ G
Sbjct: 462 ALILAPTRELAAQIHEALRTYCQNTDIIVLLSYG 495
>AF025451-4|AAL16306.1| 567|Caenorhabditis elegans Hypothetical
protein C24H12.4b protein.
Length = 567
Score = 39.9 bits (89), Expect = 0.002
Identities = 21/62 (33%), Positives = 35/62 (56%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
V++ TPG+++ + + LV+DEAD LLS ++ + + S+LP Q L+ S
Sbjct: 149 VVVTTPGKLLRMCSLRPEYCTLVSYLVMDEADLLLSFGYEEEMIKIRSKLPPTYQCLMTS 208
Query: 737 AT 742
AT
Sbjct: 209 AT 210
>U80447-2|AAO38637.1| 579|Caenorhabditis elegans Hypothetical
protein F55F8.2b protein.
Length = 579
Score = 37.1 bits (82), Expect = 0.013
Identities = 20/52 (38%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Frame = +3
Query: 63 MGIFEKGWEKPSPIQEASIPIALSGK-DVLARAKNGTGKTGAYCIPVLEQVI 215
M IF + +P+ IQ A +P A+ + DVL A+ G+GKT A+ IP++ +++
Sbjct: 1 MLIFFFRFSEPTEIQSAVLPAAVRDRQDVLGAAETGSGKTLAFGIPLVARLL 52
Score = 36.7 bits (81), Expect = 0.017
Identities = 21/76 (27%), Positives = 43/76 (56%), Gaps = 10/76 (13%)
Frame = +2
Query: 545 QNVQVIIATPGRMIDLMDKQ-----VAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLP 709
Q +++ATPGR+ +M + +A+ + LV+DE D+++ + + L +++++
Sbjct: 118 QRPDIVVATPGRLWAMMQEAETGEFLAEWKDLKCLVVDETDRMVEEGYFAELTHILNKIH 177
Query: 710 KER-----QILLFSAT 742
+E Q L+FSAT
Sbjct: 178 EESEKEKLQTLVFSAT 193
>Z99281-28|CAB16503.1| 633|Caenorhabditis elegans Hypothetical
protein Y57G11C.1 protein.
Length = 633
Score = 31.9 bits (69), Expect = 0.50
Identities = 12/37 (32%), Positives = 24/37 (64%)
Frame = +2
Query: 626 RMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
R+L+LDEA L + +GM+ +++ KER +++ +
Sbjct: 531 RVLILDEATSALDSESEGMVQEALNKCAKERTVIVIA 567
>L17337-1|AAP68928.1| 593|Caenorhabditis elegans Hypothetical
protein ZK686.2 protein.
Length = 593
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/40 (42%), Positives = 20/40 (50%)
Frame = +3
Query: 93 PSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
PS E P L +DV A G+GKT Y +PVL V
Sbjct: 142 PSLFFEIRSPPPLRPRDVAIAAPTGSGKTICYVLPVLAAV 181
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/49 (30%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAK---MDQCRMLVLDEADKLLSQDFKGMLDMV 694
VI+ATP R++ + ++ + + R L++DEAD++ + LD+V
Sbjct: 243 VIVATPARLVQHLTSKIPPPIDLSKLRFLIVDEADRMGKLMREEWLDLV 291
>AL117207-23|CAE18016.2| 66|Caenorhabditis elegans Hypothetical
protein Y60A3A.23 protein.
Length = 66
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 4/38 (10%)
Frame = +2
Query: 164 WNW*N-WCLLYSSFGTGNLLYV---TIVFIFMFLSMMK 265
+NW N W + + F TG+LL T++FI+ +SM K
Sbjct: 8 FNWANSWSIFFLGFSTGSLLLTLIFTVMFIYFRISMRK 45
>AL117200-9|CAB60586.1| 807|Caenorhabditis elegans Hypothetical
protein Y50E8A.16 protein.
Length = 807
Score = 30.3 bits (65), Expect = 1.5
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = +2
Query: 626 RMLVLDEADKLLSQDFKGMLDMVISRLPKERQILLFS 736
R+L+LDEA L + + M+ ++R +ER +L+ +
Sbjct: 707 RVLILDEATSALDSESEAMVQEALNRCARERTVLVIA 743
>AF125963-6|AAK95885.1| 520|Caenorhabditis elegans Hypothetical
protein Y38A10A.6 protein.
Length = 520
Score = 29.9 bits (64), Expect = 2.0
Identities = 13/54 (24%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 557 VIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLS-QDFKGMLDMVISRLPKE 715
+ T G++ ++ + +D +M++LDE+DK++ F +D V+ +L ++
Sbjct: 225 IAFCTMGKLKASIEDKTILLDNLKMMILDESDKMIDIACFGNDIDWVLDQLQED 278
>Z70750-8|CAA94743.1| 300|Caenorhabditis elegans Hypothetical
protein C50F4.8 protein.
Length = 300
Score = 29.1 bits (62), Expect = 3.5
Identities = 10/30 (33%), Positives = 17/30 (56%)
Frame = -2
Query: 387 DQPKTIHSCNFNNYTVLF*NIVFFNQFCFV 298
D+ ++ NFN++ F N FF +FC +
Sbjct: 62 DRASSLMQLNFNDFLTSFSNTTFFEKFCVI 91
>U00052-13|AAW88393.1| 608|Caenorhabditis elegans Hypothetical
protein K02F3.12b protein.
Length = 608
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 87 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 85 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 123
>U00052-12|AAK21428.2| 631|Caenorhabditis elegans Hypothetical
protein K02F3.12a protein.
Length = 631
Score = 29.1 bits (62), Expect = 3.5
Identities = 14/39 (35%), Positives = 21/39 (53%)
Frame = +3
Query: 87 EKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVL 203
EK P+Q A+I +S +D + G GK+ Y +P L
Sbjct: 108 EKFRPLQRAAINAVMSKEDAVVILSTGGGKSLCYQLPAL 146
>Z78064-8|CAO82042.1| 357|Caenorhabditis elegans Hypothetical
protein F57B1.9a protein.
Length = 357
Score = 28.3 bits (60), Expect = 6.1
Identities = 19/72 (26%), Positives = 35/72 (48%)
Frame = -2
Query: 351 NYTVLF*NIVFFNQFCFVSLIKSEGESKYFIILKNIKMKTIVTYNKLPVPKLEYNKHQFY 172
+YT+LF N+V Q CFV ++ +S + M ++ + L V + YN + Y
Sbjct: 137 HYTILFCNLVIAVQRCFVFFFRNLADSVFDTPFMYAWMISVYLLSLLVVYAMMYNNCR-Y 195
Query: 171 QFHS*LLQVHLF 136
++ +L L+
Sbjct: 196 RYSLNVLHYELY 207
>Z73973-6|CAA98268.2| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
W+ QE+ P ++ L R G+ TGA+C+P++ +V
Sbjct: 98 WDSRVNYQESREPKLIAESVCLCRKSRGS--TGAFCMPIVRKV 138
>Z71185-13|CAD54125.1| 189|Caenorhabditis elegans Hypothetical
protein F25D1.3 protein.
Length = 189
Score = 27.9 bits (59), Expect = 8.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +3
Query: 84 WEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQV 212
W+ QE+ P ++ L R G+ TGA+C+P++ +V
Sbjct: 98 WDSRVNYQESREPKLIAESVCLCRKSRGS--TGAFCMPIVRKV 138
>U32305-4|AAK18861.1| 139|Caenorhabditis elegans Hypothetical
protein B0336.13 protein.
Length = 139
Score = 27.9 bits (59), Expect = 8.1
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = +2
Query: 593 MDKQVAKMDQCRMLVLDEADKLLSQDFKGMLDMVISRLPKER 718
+DK + M+ +L A K+L Q K M + ISRLPKE+
Sbjct: 16 LDKTLEDMESEGLLTKSLASKVLQQFDKSM-NKQISRLPKEK 56
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,740,488
Number of Sequences: 27780
Number of extensions: 382369
Number of successful extensions: 1031
Number of sequences better than 10.0: 62
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1014
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1766990064
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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