Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00301
(748 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein. 62 7e-12
DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid p... 23 4.0
AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatas... 23 4.0
AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropi... 23 4.0
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 22 5.3
AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139 prot... 22 7.0
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 21 9.3
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 21 9.3
DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex det... 21 9.3
DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex det... 21 9.3
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 21 9.3
AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex det... 21 9.3
>DQ288391-1|ABC41341.1| 630|Apis mellifera vasa protein protein.
Length = 630
Score = 61.7 bits (143), Expect = 7e-12
Identities = 31/86 (36%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Frame = +2
Query: 503 YRGTNLRDDIMRIYQNVQVIIATPGRMIDLMDKQVAKMDQCRMLVLDEADKLLSQDFKGM 682
Y GT++ ++ +++ATPGR++D ++K K + LVLDEAD++L F
Sbjct: 308 YGGTSVMHQRGKLSAGCHILVATPGRLLDFVEKGRVKFSSVQFLVLDEADRMLDMGFLPS 367
Query: 683 LDMVI---SRLP-KERQILLFSATFP 748
++ ++ + +P ERQ L+FSATFP
Sbjct: 368 IEKMVDHETMVPLGERQTLMFSATFP 393
Score = 58.0 bits (134), Expect = 9e-11
Identities = 22/62 (35%), Positives = 45/62 (72%)
Frame = +3
Query: 30 FEEFCLKRELLMGIFEKGWEKPSPIQEASIPIALSGKDVLARAKNGTGKTGAYCIPVLEQ 209
FE L+ +L I + G++KP+P+Q+ ++PI ++G+D++A A+ G+GKT A+ +P++
Sbjct: 198 FEAAGLRNIVLDNIKKSGYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINT 257
Query: 210 VI 215
++
Sbjct: 258 LL 259
>DQ058012-1|AAY57281.1| 373|Apis mellifera venom allergen acid
phosphatase protein.
Length = 373
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 674 KGMLDMVISRLPKERQILLFS 736
K MLD+V K+R+I LFS
Sbjct: 235 KHMLDVVSGTQKKKRKIYLFS 255
>AY939855-1|AAX33235.1| 388|Apis mellifera venom acid phosphatase
precursor protein.
Length = 388
Score = 22.6 bits (46), Expect = 4.0
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = +2
Query: 674 KGMLDMVISRLPKERQILLFS 736
K MLD+V K+R+I LFS
Sbjct: 250 KHMLDVVSGTQKKKRKIYLFS 270
>AJ780964-1|CAG62942.2| 332|Apis mellifera putative corticotropin
releasing hormone-binding protein protein.
Length = 332
Score = 22.6 bits (46), Expect = 4.0
Identities = 19/67 (28%), Positives = 29/67 (43%)
Frame = -2
Query: 747 GKVAENSKIWRSLGNLEITISSMPLKSCERSLSASSRTNIRH*SILATCLSMRSIIRPGV 568
GK +I+ S N+ + +P SL A N R ++LAT L+ +R
Sbjct: 153 GKNIGMKRIFTSSQNIAVIEYRIPKSGKGFSLFARFLKNPRPCNVLATSLTEPYTLRNYG 212
Query: 567 AIITCTF 547
I CT+
Sbjct: 213 RRINCTY 219
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.2 bits (45), Expect = 5.3
Identities = 10/30 (33%), Positives = 15/30 (50%)
Frame = -1
Query: 589 INHTPRCGNNHLYILINTHYIISKVCAPVV 500
I+ T NH LI+ YI+ +P+V
Sbjct: 6 IDITMEISKNHKEQLISNDYILDNYTSPIV 35
>AF274024-1|AAF90150.1| 232|Apis mellifera tetraspanin F139
protein.
Length = 232
Score = 21.8 bits (44), Expect = 7.0
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 512 CPCSNHYTNVCV 477
C SN YTN CV
Sbjct: 172 CSISNSYTNGCV 183
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 102 NYNNYKKLYYNINYIEQ 118
>DQ325077-1|ABD14091.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 100 NYNNYKKLYYNINYIEQ 116
>DQ325076-1|ABD14090.1| 191|Apis mellifera complementary sex
determiner protein.
Length = 191
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI + Q
Sbjct: 110 NYNNYKKLYYNINYIEQ 126
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 21.4 bits (43), Expect = 9.3
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = -2
Query: 84 IPFQKYPSTILASNKT 37
I FQKY S L SN+T
Sbjct: 379 ISFQKYMSGTLNSNET 394
>AY569704-1|AAS86657.1| 426|Apis mellifera complementary sex
determiner protein.
Length = 426
Score = 21.4 bits (43), Expect = 9.3
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -2
Query: 360 NFNNYTVLF*NIVFFNQ 310
N+NNY L+ NI+ Q
Sbjct: 345 NYNNYKKLYYNIINIEQ 361
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 217,527
Number of Sequences: 438
Number of extensions: 4803
Number of successful extensions: 23
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23388480
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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