Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00300
(751 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X97685-1|CAA66277.1| 543|Drosophila melanogaster sterol carrier... 110 2e-24
AY089539-1|AAL90277.1| 544|Drosophila melanogaster LD10783p pro... 110 2e-24
AE014134-2983|AAF53713.1| 544|Drosophila melanogaster CG17320-P... 110 2e-24
AY071384-1|AAL49006.1| 115|Drosophila melanogaster RE42326p pro... 53 4e-07
AE014298-1953|AAF48311.1| 115|Drosophila melanogaster CG11151-P... 53 4e-07
X95443-1|CAA64718.1| 414|Drosophila melanogaster sterol carrier... 51 1e-06
AY058779-1|AAL14008.1| 407|Drosophila melanogaster SD06839p pro... 51 1e-06
AE014134-2982|AAF53712.2| 407|Drosophila melanogaster CG17597-P... 51 1e-06
AY047508-1|AAK77240.1| 412|Drosophila melanogaster GH01709p pro... 36 0.078
AE014297-4159|AAF56735.1| 412|Drosophila melanogaster CG5590-PA... 36 0.078
AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC... 31 1.7
AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA... 31 2.2
BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p pro... 30 2.9
BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p pro... 30 2.9
BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p pro... 30 2.9
AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein. 30 2.9
AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA... 30 2.9
AE013599-204|AAM70812.1| 637|Drosophila melanogaster CG30446-PA... 30 2.9
X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase... 29 8.9
AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p pro... 29 8.9
AE014296-2483|AAN11792.1| 175|Drosophila melanogaster CG6988-PB... 29 8.9
AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA p... 29 8.9
>X97685-1|CAA66277.1| 543|Drosophila melanogaster sterol carrier
protein x protein.
Length = 543
Score = 110 bits (265), Expect = 2e-24
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = +2
Query: 251 IPNVTPNNVAAVADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEG 430
+ N+T AA ++ +GFKV +K+LE+AMQ D+DNLIEKVR IYGFKV NGP+G G
Sbjct: 406 VRNLTAAGKAATSE--DGFKVAPLLKLLEQAMQEDKDNLIEKVRAIYGFKVNNGPNGQTG 463
Query: 431 YWVINAKEGKGKVTYNGSEKPDVTF 505
+WVI+AK+GKGK+ +NG++K DVTF
Sbjct: 464 FWVIDAKQGKGKIIFNGTQKCDVTF 488
Score = 71.7 bits (168), Expect = 1e-12
Identities = 38/56 (67%), Positives = 44/56 (78%), Gaps = 1/56 (1%)
Frame = +1
Query: 508 VSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQ-RQAAGRIETIRSKL 672
+SD+DV +L++GKL PQKAFFQGKIKIQGNMG AMKL DLQ AG +RSKL
Sbjct: 490 ISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKLMDLQDPPKAG--SRLRSKL 543
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AY089539-1|AAL90277.1| 544|Drosophila melanogaster LD10783p
protein.
Length = 544
Score = 110 bits (265), Expect = 2e-24
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = +2
Query: 251 IPNVTPNNVAAVADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEG 430
+ N+T AA ++ +GFKV +K+LE+AMQ D+DNLIEKVR IYGFKV NGP+G G
Sbjct: 406 VRNLTAAGKAATSE--DGFKVAPLLKLLEQAMQEDKDNLIEKVRAIYGFKVNNGPNGQTG 463
Query: 431 YWVINAKEGKGKVTYNGSEKPDVTF 505
+WVI+AK+GKGK+ +NG++K DVTF
Sbjct: 464 FWVIDAKQGKGKIIFNGTQKCDVTF 488
Score = 90.2 bits (214), Expect = 3e-18
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +1
Query: 508 VSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRIETIRSKL 672
+SD+DV +L++GKL PQKAFFQGKIKIQGNMG AMKL DLQR A GRIE +RSKL
Sbjct: 490 ISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL 544
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AE014134-2983|AAF53713.1| 544|Drosophila melanogaster CG17320-PA
protein.
Length = 544
Score = 110 bits (265), Expect = 2e-24
Identities = 50/85 (58%), Positives = 67/85 (78%)
Frame = +2
Query: 251 IPNVTPNNVAAVADNPEGFKVFKYMKILEEAMQTDQDNLIEKVRGIYGFKVRNGPDGAEG 430
+ N+T AA ++ +GFKV +K+LE+AMQ D+DNLIEKVR IYGFKV NGP+G G
Sbjct: 406 VRNLTAAGKAATSE--DGFKVAPLLKLLEQAMQEDKDNLIEKVRAIYGFKVNNGPNGQTG 463
Query: 431 YWVINAKEGKGKVTYNGSEKPDVTF 505
+WVI+AK+GKGK+ +NG++K DVTF
Sbjct: 464 FWVIDAKQGKGKIIFNGTQKCDVTF 488
Score = 90.2 bits (214), Expect = 3e-18
Identities = 42/55 (76%), Positives = 48/55 (87%)
Frame = +1
Query: 508 VSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRIETIRSKL 672
+SD+DV +L++GKL PQKAFFQGKIKIQGNMG AMKL DLQR A GRIE +RSKL
Sbjct: 490 ISDDDVFELLTGKLPPQKAFFQGKIKIQGNMGFAMKLMDLQRSAQGRIEELRSKL 544
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AY071384-1|AAL49006.1| 115|Drosophila melanogaster RE42326p
protein.
Length = 115
Score = 53.2 bits (122), Expect = 4e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 487 KTRRDLHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAA 642
K L V+DED+ D+ GKLNPQ AF +GK+KI GN+ L KL L + A
Sbjct: 62 KVDTTLTVADEDMVDIALGKLNPQAAFMKGKLKIAGNIMLTQKLAPLLKTDA 113
>AE014298-1953|AAF48311.1| 115|Drosophila melanogaster CG11151-PA
protein.
Length = 115
Score = 53.2 bits (122), Expect = 4e-07
Identities = 26/52 (50%), Positives = 33/52 (63%)
Frame = +1
Query: 487 KTRRDLHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAA 642
K L V+DED+ D+ GKLNPQ AF +GK+KI GN+ L KL L + A
Sbjct: 62 KVDTTLTVADEDMVDIALGKLNPQAAFMKGKLKIAGNIMLTQKLAPLLKTDA 113
>X95443-1|CAA64718.1| 414|Drosophila melanogaster sterol carrier
protein x-relatedthiolase protein.
Length = 414
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AY058779-1|AAL14008.1| 407|Drosophila melanogaster SD06839p
protein.
Length = 407
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AE014134-2982|AAF53712.2| 407|Drosophila melanogaster CG17597-PA
protein.
Length = 407
Score = 51.2 bits (117), Expect = 1e-06
Identities = 21/29 (72%), Positives = 26/29 (89%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP A++ALQHNLGLGGAVV+ +YR GF
Sbjct: 371 RQVPNAQLALQHNLGLGGAVVVALYRLGF 399
>AY047508-1|AAK77240.1| 412|Drosophila melanogaster GH01709p
protein.
Length = 412
Score = 35.5 bits (78), Expect = 0.078
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 502 LHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRI 651
L ++ ++ D+ SGKL A+ GK+KI G+ A+KL L + ++
Sbjct: 363 LTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKALKLEKLMKALKSKL 412
>AE014297-4159|AAF56735.1| 412|Drosophila melanogaster CG5590-PA
protein.
Length = 412
Score = 35.5 bits (78), Expect = 0.078
Identities = 16/50 (32%), Positives = 28/50 (56%)
Frame = +1
Query: 502 LHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQAAGRI 651
L ++ ++ D+ SGKL A+ GK+KI G+ A+KL L + ++
Sbjct: 363 LTMNSKNFFDMFSGKLKAAPAYMTGKLKISGDFQKALKLEKLMKALKSKL 412
>AE014298-2516|AAF48692.1| 1430|Drosophila melanogaster CG8945-PC
protein.
Length = 1430
Score = 31.1 bits (67), Expect = 1.7
Identities = 20/69 (28%), Positives = 32/69 (46%)
Frame = +3
Query: 282 PSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAK 461
PS K + + +T RS K K ++T SR + +R + GSS R+K K
Sbjct: 491 PSEEAEKEVTADSTKRSQKVVSKESKTILSRGNPNVVAARRVSTPKRRSPKGSSGRRKTK 550
Query: 462 GKSPTTALK 488
++P + K
Sbjct: 551 QQTPPSTQK 559
>AE014297-1125|AAF54511.2| 3111|Drosophila melanogaster CG3996-PA
protein.
Length = 3111
Score = 30.7 bits (66), Expect = 2.2
Identities = 23/71 (32%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Frame = +3
Query: 285 SPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGST-VSRSETVQTAPRVTGSSMRKKAK 461
SP+ + +++ +T + K K T+ SRKSA S S S Q +P T S RK K
Sbjct: 2248 SPSRKATIKTPHTSPTRKPIIKSPYTSPSRKSAKSPYTSPSRNRQRSPSPTRSPERKSKK 2307
Query: 462 GKSPTTALKNP 494
+ A + P
Sbjct: 2308 SPYTSPARRKP 2318
>BT022798-1|AAY55214.1| 562|Drosophila melanogaster IP13650p
protein.
Length = 562
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 448 ERRQRESHLQRL*KTRRDLHVSDEDVADLISGKLNP 555
+R+QRE H+QR+ K R+DL DE V I + P
Sbjct: 400 KRQQREEHIQRIRKLRQDL---DEQVKKRIEEETRP 432
>BT022774-1|AAY55190.1| 420|Drosophila melanogaster IP13950p
protein.
Length = 420
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 448 ERRQRESHLQRL*KTRRDLHVSDEDVADLISGKLNP 555
+R+QRE H+QR+ K R+DL DE V I + P
Sbjct: 258 KRQQREEHIQRIRKLRQDL---DEQVKKRIEEETRP 290
>BT022766-1|AAY55182.1| 560|Drosophila melanogaster IP13850p
protein.
Length = 560
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 448 ERRQRESHLQRL*KTRRDLHVSDEDVADLISGKLNP 555
+R+QRE H+QR+ K R+DL DE V I + P
Sbjct: 398 KRQQREEHIQRIRKLRQDL---DEQVKKRIEEETRP 430
>AY865075-2|AAW79481.1| 630|Drosophila melanogaster SR-CI protein.
Length = 630
Score = 30.3 bits (65), Expect = 2.9
Identities = 19/56 (33%), Positives = 26/56 (46%)
Frame = +3
Query: 330 SLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT 497
SL T T+ +RKS +T + S + T R T ++ KA TT K PT
Sbjct: 395 SLPPTVTSTSTSTTRKSTTTTSTTSTSTTTTKRPTTTTTTTKATTTKRTTTTKKPT 450
>AE014296-2087|AAF49969.1| 564|Drosophila melanogaster CG6793-PA
protein.
Length = 564
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/36 (44%), Positives = 22/36 (61%)
Frame = +1
Query: 448 ERRQRESHLQRL*KTRRDLHVSDEDVADLISGKLNP 555
+R+QRE H+QR+ K R+DL DE V I + P
Sbjct: 402 KRQQREEHIQRIRKLRQDL---DEQVKKRIEEETRP 434
>AE013599-204|AAM70812.1| 637|Drosophila melanogaster CG30446-PA
protein.
Length = 637
Score = 30.3 bits (65), Expect = 2.9
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = -3
Query: 245 TVHCDDDSTPETQVMLQRYPGAWHLTVDDRRAG 147
T C D+ PE LQR+PG W L VD AG
Sbjct: 247 TGSCAFDNLPEIGKQLQRFPGVW-LHVDAAYAG 278
>X17298-1|CAA35185.1| 1129|Drosophila melanogaster RNA polymerase 3,
second largestsubunit protein.
Length = 1129
Score = 28.7 bits (61), Expect = 8.9
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +2
Query: 23 FDGRSVDILRYLLLSRDIKFICRISNSRSRLYHQRINSDSEFRLACRLP*GATRPDSAAT 202
FDG ++ Y ++ D K C + + R +L ++ + R+P AT D A+
Sbjct: 821 FDG---EVATYKVVKMDEKEDCIVESIR-QLGSFDLSPTKMVAITLRVPRPATIGDKFAS 876
Query: 203 *LGSRGCCRHHNVP*RIPNVTPNNVAAVADNPEGFKVFKYMKILEEAM 346
G +G C +P + + NP GF + ++ E M
Sbjct: 877 RAGQKGICSQKYPAEDLPFTESGLIPDIVFNPHGFPSRMTIAMMIETM 924
>AY075569-1|AAL68376.1| 1129|Drosophila melanogaster SD02110p protein.
Length = 1129
Score = 28.7 bits (61), Expect = 8.9
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +2
Query: 23 FDGRSVDILRYLLLSRDIKFICRISNSRSRLYHQRINSDSEFRLACRLP*GATRPDSAAT 202
FDG ++ Y ++ D K C + + R +L ++ + R+P AT D A+
Sbjct: 821 FDG---EVATYKVVKMDEKEDCIVESIR-QLGSFDLSPKKMVAITLRVPRPATIGDKFAS 876
Query: 203 *LGSRGCCRHHNVP*RIPNVTPNNVAAVADNPEGFKVFKYMKILEEAM 346
G +G C +P + + NP GF + ++ E M
Sbjct: 877 RAGQKGICSQKYPAEDLPFTESGLIPDIVFNPHGFPSRMTIAMMIETM 924
>AE014296-2483|AAN11792.1| 175|Drosophila melanogaster CG6988-PB,
isoform B protein.
Length = 175
Score = 28.7 bits (61), Expect = 8.9
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Frame = +3
Query: 276 WPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAP-RVTGSSMRK 452
W P PT+ +ALRS + +S + TR++ S + S +S S ++ T + S R
Sbjct: 84 WTPLPTSWRALRSRPSPQSNTSARRTTRSSTSTWTGLSMISSSSSMPTVRWPIPSPSRRP 143
Query: 453 KAKGKSP 473
+ + + P
Sbjct: 144 RRRRRRP 150
>AE014134-97|AAF51503.1| 1129|Drosophila melanogaster CG4033-PA
protein.
Length = 1129
Score = 28.7 bits (61), Expect = 8.9
Identities = 25/108 (23%), Positives = 44/108 (40%)
Frame = +2
Query: 23 FDGRSVDILRYLLLSRDIKFICRISNSRSRLYHQRINSDSEFRLACRLP*GATRPDSAAT 202
FDG ++ Y ++ D K C + + R +L ++ + R+P AT D A+
Sbjct: 821 FDG---EVATYKVVKMDEKEDCIVESIR-QLGSFDLSPKKMVAITLRVPRPATIGDKFAS 876
Query: 203 *LGSRGCCRHHNVP*RIPNVTPNNVAAVADNPEGFKVFKYMKILEEAM 346
G +G C +P + + NP GF + ++ E M
Sbjct: 877 RAGQKGICSQKYPAEDLPFTESGLIPDIVFNPHGFPSRMTIAMMIETM 924
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,273,313
Number of Sequences: 53049
Number of extensions: 702881
Number of successful extensions: 1922
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 1761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1922
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3417159966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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