Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00300
(751 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,... 49 3e-06
Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical p... 46 4e-05
D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA... 44 9e-05
AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical ... 44 9e-05
Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical pr... 36 0.023
U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases... 35 0.071
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 33 0.22
Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical pr... 31 0.87
Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical pr... 30 2.0
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 29 2.7
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 29 2.7
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 29 2.7
U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical pr... 29 3.5
U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical pr... 29 3.5
>U41544-2|AAA83184.1| 436|Caenorhabditis elegans Dehydrogenases,
short chain protein28 protein.
Length = 436
Score = 49.2 bits (112), Expect = 3e-06
Identities = 22/51 (43%), Positives = 32/51 (62%)
Frame = +1
Query: 487 KTRRDLHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQA 639
K + V+D D D+ +GKLN QKAF GK+K++GN+ L KL + +A
Sbjct: 381 KANATVTVADSDFVDIAAGKLNAQKAFMSGKLKVKGNVMLLQKLQTVLEKA 431
>Z48638-10|CAA88566.1| 118|Caenorhabditis elegans Hypothetical
protein ZK892.2 protein.
Length = 118
Score = 45.6 bits (103), Expect = 4e-05
Identities = 17/40 (42%), Positives = 29/40 (72%)
Frame = +1
Query: 499 DLHVSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKL 618
++++ D D + +GK+ P +AF QGK+K++GN+ AMKL
Sbjct: 66 EINIKDSDFIAIAAGKMKPDQAFMQGKMKLKGNIAKAMKL 105
>D86473-1|BAA20377.1| 412|Caenorhabditis elegans 3-keto-acyl-CoA
thiolase protein.
Length = 412
Score = 44.4 bits (100), Expect = 9e-05
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP ++A+QHN+G+GGA V+ +YR GF
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGF 404
>AL023847-7|CAA19548.1| 412|Caenorhabditis elegans Hypothetical
protein Y57A10C.6 protein.
Length = 412
Score = 44.4 bits (100), Expect = 9e-05
Identities = 16/29 (55%), Positives = 24/29 (82%)
Frame = +3
Query: 168 REVPRARIALQHNLGLGGAVVITMYRKGF 254
R+VP ++A+QHN+G+GGA V+ +YR GF
Sbjct: 376 RQVPNCKVAMQHNIGIGGAGVVGLYRLGF 404
>Z92838-5|CAB07404.2| 578|Caenorhabditis elegans Hypothetical
protein T03D8.6 protein.
Length = 578
Score = 36.3 bits (80), Expect = 0.023
Identities = 17/37 (45%), Positives = 19/37 (51%)
Frame = +2
Query: 389 YGFKVRNGPDGAEGYWVINAKEGKGKVTYNGSEKPDV 499
YGFK P GYW I K G GKVT+ +P V
Sbjct: 125 YGFKAAGTPGEIAGYWHIFKKFGSGKVTWKELVQPSV 161
>U28739-13|AAK68187.1| 418|Caenorhabditis elegans Dehydrogenases,
short chain protein6 protein.
Length = 418
Score = 34.7 bits (76), Expect = 0.071
Identities = 18/43 (41%), Positives = 25/43 (58%)
Frame = +1
Query: 508 VSDEDVADLISGKLNPQKAFFQGKIKIQGNMGLAMKLTDLQRQ 636
++ E A L +GKL P A K++I G+M AMKL L R+
Sbjct: 370 LAPEHFAPLFTGKLRPTTALMTKKLQISGDMPGAMKLESLLRK 412
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 452
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 224 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTM 282
Query: 453 KAKGKSPTTALKNPT*PS 506
K+ +PTT PT P+
Sbjct: 283 KSTPTTPTTMKSTPTTPT 300
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 452
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 338 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTPTTM 396
Query: 453 KAKGKSPTTALKNPT*PS 506
K+ +PTT PT P+
Sbjct: 397 KSTPTTPTTMKSTPTTPT 414
Score = 33.1 bits (72), Expect = 0.22
Identities = 22/77 (28%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSA-GSTVSRSETVQTAPRVTGSSMRKK 455
P +PTT ++S+ T + K T TT + + ST + T+++ P + K
Sbjct: 361 PTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTMKSTPTTPTTPTTMK 420
Query: 456 AKGKSPTTALKNPT*PS 506
+ +PTT PT PS
Sbjct: 421 STPTTPTTMKSTPTTPS 437
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 452
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 237 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTMKST 295
Query: 453 KAKGKSPTTALKNPT*PS 506
+PTT PT P+
Sbjct: 296 PTTPTTPTTMKSTPTTPT 313
Score = 30.3 bits (65), Expect = 1.5
Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 452
P +PTT K+ ++ T + + P PT T + KS +T + T+++ P +
Sbjct: 351 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTPTTMKSTPTTPTTMKST 409
Query: 453 KAKGKSPTTALKNPT*PS 506
+PTT PT P+
Sbjct: 410 PTTPTTPTTMKSTPTTPT 427
Score = 29.9 bits (64), Expect = 2.0
Identities = 21/78 (26%), Positives = 35/78 (44%), Gaps = 2/78 (2%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKR--PCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRK 452
P +PTT K+ ++ T + + P PT T + KS +T + ++ T P +
Sbjct: 250 PTTPTTMKSTPTTPTTPTTMKSTPTTPTTPT-TMKSTPTTPTTMKSTPTTPTTPTTMKST 308
Query: 453 KAKGKSPTTALKNPT*PS 506
+PTT PT P+
Sbjct: 309 PTTPTTPTTMKSTPTTPT 326
>Z75546-7|CAA99895.1| 566|Caenorhabditis elegans Hypothetical
protein R05D11.8 protein.
Length = 566
Score = 31.1 bits (67), Expect = 0.87
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 2/97 (2%)
Frame = +3
Query: 372 RKSAGSTVSRSETVQTAPRVTGSSMRKKAKGKSPTTALKNPT*PSXXXXXXXXXXXXETE 551
+KSA STVS + T ++ S R ++ SP + K + P +
Sbjct: 92 KKSAESTVSSTSTASSSASSVPDSSRNRSVAVSPQKSAKGRS-PKKFATNVEKLFEHHST 150
Query: 552 PSEGVLPRKD--QDPGQHGAGYEAD*FAASSRRQDRD 656
PS+ L +K Q P +G + A+ +A+ Q D
Sbjct: 151 PSKLTLAKKQSRQSPMHNGFSHTAEEISATPHFQSFD 187
>Z22179-1|CAA80169.1| 254|Caenorhabditis elegans Hypothetical
protein F58A4.1 protein.
Length = 254
Score = 30.7 bits (66), Expect = 1.2
Identities = 24/78 (30%), Positives = 35/78 (44%), Gaps = 5/78 (6%)
Frame = +3
Query: 279 PPSPTTRKALRS--SNT*RSLKRPCKPTRT---T*SRKSAGSTVSRSETVQTAPRVTGSS 443
P SPTT S S T L +P + T T T S S ++ S S + T+ + S+
Sbjct: 60 PKSPTTTSISTSTVSTTPERLTKPYEETDTPIPTHSSPSTSTSTSTSTSTSTSTSRSTST 119
Query: 444 MRKKAKGKSPTTALKNPT 497
+ + + TTA PT
Sbjct: 120 VTPTTRSSTTTTATSTPT 137
>Z49130-1|CAA88965.2| 708|Caenorhabditis elegans Hypothetical
protein T06D8.2 protein.
Length = 708
Score = 29.9 bits (64), Expect = 2.0
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Frame = +3
Query: 264 RRTMWPPSPTTRKALRSSNT*RSLKRPCKPT--RTT*SRKSAGSTVSRSETVQTAPRVTG 437
RRT+ P P T ++ + + + + P +PT + SRK S V R ++ T
Sbjct: 329 RRTVTPKRPQTNDSVSTRRSSTTWEVPIRPTTMNSQISRKRTPSPVVRKAPSSSSSNSTS 388
Query: 438 SSMRKKA 458
SS R+++
Sbjct: 389 SSSRRRS 395
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 458
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 459 KGKSPTTALKNPT*P 503
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 458
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 459 KGKSPTTALKNPT*P 503
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 458
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 459 KGKSPTTALKNPT*P 503
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.5 bits (63), Expect = 2.7
Identities = 21/75 (28%), Positives = 34/75 (45%)
Frame = +3
Query: 279 PPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMRKKA 458
P SPT ++ S +K P K KS S + ++ + + TG +++K+
Sbjct: 1412 PASPTKKE---KSPAAEEVKSPTK------KEKSPSSPTKKEKSPSSPTKKTGDEVKEKS 1462
Query: 459 KGKSPTTALKNPT*P 503
KSPT K+P P
Sbjct: 1463 PPKSPTKKEKSPEKP 1477
>U53341-6|AAC69106.1| 790|Caenorhabditis elegans Hypothetical
protein F49E10.2a protein.
Length = 790
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 270 TMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMR 449
T P + TT + ++T + KPT +T + S +T + S T T P+ T ++
Sbjct: 594 TQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
Query: 450 KKAKGKSPTTALKNPT 497
+K + T PT
Sbjct: 654 EKPVTLTTQTWTAPPT 669
>U53341-5|AAL06020.1| 842|Caenorhabditis elegans Hypothetical
protein F49E10.2b protein.
Length = 842
Score = 29.1 bits (62), Expect = 3.5
Identities = 20/76 (26%), Positives = 34/76 (44%)
Frame = +3
Query: 270 TMWPPSPTTRKALRSSNT*RSLKRPCKPTRTT*SRKSAGSTVSRSETVQTAPRVTGSSMR 449
T P + TT + ++T + KPT +T + S +T + S T T P+ T ++
Sbjct: 594 TQKPSTTTTVPSTTPTSTTTTTTTTPKPTTSTSTSTSTTTTTTTSTTATTTPQPTTTTTS 653
Query: 450 KKAKGKSPTTALKNPT 497
+K + T PT
Sbjct: 654 EKPVTLTTQTWTAPPT 669
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,550,948
Number of Sequences: 27780
Number of extensions: 339986
Number of successful extensions: 990
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 988
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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