Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00298
         (805 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    24   1.2  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.7  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   8.7  
AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger tran...    21   8.7  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 24.2 bits (50), Expect = 1.2
 Identities = 8/23 (34%), Positives = 13/23 (56%)
 Frame = +2

Query: 590 HSTYQADKVQARVAFICSCNRKY 658
           H +Y  DK   R+ ++C   RK+
Sbjct: 921 HISYHPDKADCRMYYMCEGERKH 943


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.8
 Identities = 11/20 (55%), Positives = 14/20 (70%)
 Frame = +2

Query: 245 STYL*IRAVQTTYFCGLIKF 304
           ST+L I A  TTYF  +I+F
Sbjct: 334 STFLGILATITTYFIVIIEF 353


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +1

Query: 385 NSHNNIKTFK 414
           NSH  IKTFK
Sbjct: 194 NSHGKIKTFK 203


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 10/42 (23%), Positives = 21/42 (50%)
 Frame = -3

Query: 458 IIYLYSCSIPFP*HHLKVLILLWEFWKVFITPCFFNLFLLNI 333
           I Y Y   I F  H L ++ + + ++   +  C F +F +++
Sbjct: 238 IYYFYYAFILFTVHLLLLVCIYYFYYMHLLFCCAFIIFTMHL 279


>AJ621748-1|CAF21851.1|  228|Tribolium castaneum zinc finger
           transcription factor protein.
          Length = 228

 Score = 21.4 bits (43), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = +1

Query: 361 QGVINTFQNSHNNIKTFK*CHGNG 432
           +G  + F  ++NNI +   C  NG
Sbjct: 23  EGCKSFFGRTYNNISSISECKNNG 46


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,446
Number of Sequences: 336
Number of extensions: 4812
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 21895259
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)