Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00298
         (805 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled ...    24   6.3  
AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein...    24   6.3  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   6.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   6.3  
AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adh...    23   8.3  

>AY301275-1|AAQ67361.1|  611|Anopheles gambiae G-protein coupled
           receptor protein.
          Length = 611

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 685 VFLFFIPMLMVLRGYFSFSLT 747
           VF+F IP+L+++  Y S  +T
Sbjct: 355 VFMFIIPLLILIGTYLSTFMT 375


>AJ439353-2|CAD27924.1|  612|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 612

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +1

Query: 685 VFLFFIPMLMVLRGYFSFSLT 747
           VF+F IP+L+++  Y S  +T
Sbjct: 356 VFMFIIPLLILIGTYLSTFMT 376


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 218 LMRRMMRTPSTYL*IRAVQTTYFC 289
           L RR MRT +T+    A++ T++C
Sbjct: 243 LDRRCMRTGTTHHEADAIEQTFYC 266


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 6.3
 Identities = 10/24 (41%), Positives = 16/24 (66%)
 Frame = +2

Query: 218 LMRRMMRTPSTYL*IRAVQTTYFC 289
           L RR MRT +T+    A++ T++C
Sbjct: 243 LDRRCMRTGTTHHEADAIEQTFYC 266


>AJ439060-11|CAD27762.1| 1881|Anopheles gambiae putative cell-adhesion
            protein protein.
          Length = 1881

 Score = 23.4 bits (48), Expect = 8.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = +1

Query: 676  TMRVFLFFIPMLMVLRGYFSFSLTCR*AHG 765
            T +V L F P    +RGYF FS+    ++G
Sbjct: 1574 TGQVLLNFFPQKS-MRGYFDFSVLANDSYG 1602


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 845,161
Number of Sequences: 2352
Number of extensions: 18136
Number of successful extensions: 25
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 84823812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)