Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00296
(348 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0641 - 35232858-35232892,35233066-35233290,35233785-352339... 36 0.007
07_03_0249 - 15816515-15816868,15817749-15817958,15818051-158182... 35 0.020
02_04_0540 + 23748610-23748930,23749054-23749157,23749889-237500... 30 0.43
04_04_1466 - 33799104-33799229,33799659-33799669,33800052-338002... 30 0.57
07_03_0439 + 18212584-18213065,18214164-18215010 29 1.0
03_02_0583 + 9635002-9637299 29 1.3
02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,265... 29 1.3
01_05_0491 - 22680011-22680125,22680210-22680307,22680392-226804... 29 1.3
04_04_0705 - 27406405-27406424,27406425-27409260 28 1.8
03_05_0900 + 28627221-28629536 28 1.8
03_02_0582 + 9624481-9626844 27 3.1
06_03_1373 + 29667871-29668782,29668872-29669851,29670156-296703... 27 4.0
05_06_0219 + 26479708-26479710,26481045-26481173,26481675-264818... 27 4.0
05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111 27 4.0
04_03_0283 + 13887388-13887573,13887711-13887806,13888517-138886... 27 5.3
08_02_1027 + 23749400-23750698 26 7.1
06_03_1366 + 29601921-29602646 26 7.1
04_04_1065 + 30529555-30530076 26 7.1
04_03_0939 + 20934694-20935050,20936324-20936519,20936645-20937708 26 7.1
02_05_0061 + 25506648-25509399,25509564-25509901,25510392-255105... 26 7.1
01_07_0266 - 42406026-42406146,42406682-42406841,42407131-424072... 26 7.1
01_01_0285 - 2360799-2362631 26 7.1
12_02_0431 - 19000267-19000719 26 9.3
06_03_0840 + 25293314-25293838 26 9.3
04_04_1152 - 31289365-31289457,31289559-31289637,31289716-312897... 26 9.3
01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713 26 9.3
>03_06_0641 -
35232858-35232892,35233066-35233290,35233785-35233929,
35234295-35234406,35234477-35234535,35234981-35235022,
35235372-35235434,35235636-35235697,35236298-35236451,
35236572-35236651,35237646-35237709,35237791-35237959,
35238002-35238114,35238361-35238507
Length = 489
Score = 36.3 bits (80), Expect = 0.007
Identities = 19/98 (19%), Positives = 47/98 (47%), Gaps = 4/98 (4%)
Frame = +2
Query: 38 YDIDATEHLEAFIADCDRRTTAAKQRLAETQEE----LSAEVTEKANAVHELAEQIGQKL 205
YD + E ++ I +C+R+ A +RLA+ + +S + + V +L+++I +K+
Sbjct: 99 YDRELEEMIDRLIVECERKIQRALKRLADEDAKAAIAISVSEVTQTDEVLQLSKEIKEKM 158
Query: 206 ARAEALGEEGMVEESVN*WERLTNSAKRKLSPSKTIVI 319
+ EG ++ + E + ++ T+++
Sbjct: 159 KEVDTYDFEGKTDDKIKTMEVVEELRSKRADMQATLLL 196
Score = 32.7 bits (71), Expect = 0.081
Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 6/88 (6%)
Frame = +2
Query: 5 YEIASKTKDYFYDIDATEHLEAFIADCDRRTTAA---KQRLA---ETQEELSAEVTEKAN 166
Y+ KT D ++ E L + AD K R + T A V A
Sbjct: 164 YDFEGKTDDKIKTMEVVEELRSKRADMQATLLLDAFNKDRASLPQPTPTPQMASVPAPAP 223
Query: 167 AVHELAEQIGQKLARAEALGEEGMVEES 250
E I +K+ +AE LGE+GMV+E+
Sbjct: 224 PDARTQEMINEKIKKAEELGEQGMVDEA 251
>07_03_0249 -
15816515-15816868,15817749-15817958,15818051-15818245,
15818318-15818393,15819982-15820021,15820155-15820283,
15820363-15820405
Length = 348
Score = 34.7 bits (76), Expect = 0.020
Identities = 16/71 (22%), Positives = 36/71 (50%)
Frame = +2
Query: 38 YDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAE 217
++ + + E + D DR+ ++RLA+ + + + + + E++ + L + E
Sbjct: 85 FEAELAQQCEKLVIDLDRKIRRGRERLAQDVAVPPPVIGKTSEQLSIIEEKVKKLLEQIE 144
Query: 218 ALGEEGMVEES 250
LGE G V+E+
Sbjct: 145 ELGEAGKVDEA 155
>02_04_0540 +
23748610-23748930,23749054-23749157,23749889-23750063,
23750149-23750212,23750867-23750946,23751128-23751287,
23751415-23751476,23751607-23751666,23751824-23751882,
23752194-23752275,23752691-23752740,23752847-23752980,
23753508-23753590,23754070-23754142,23754461-23754477
Length = 507
Score = 30.3 bits (65), Expect = 0.43
Identities = 12/22 (54%), Positives = 17/22 (77%)
Frame = +2
Query: 185 EQIGQKLARAEALGEEGMVEES 250
E I +KL +AE LGE GM++E+
Sbjct: 289 EMIDEKLKKAEELGENGMIDEA 310
>04_04_1466 -
33799104-33799229,33799659-33799669,33800052-33800200,
33800261-33800299,33800690-33800746,33800839-33801628,
33801705-33801980,33802051-33802117,33802211-33802285,
33802618-33802812,33802927-33803076,33803152-33803522,
33804070-33804193,33804246-33804275,33804306-33804417,
33804919-33804985,33805138-33805180,33805768-33805872
Length = 928
Score = 29.9 bits (64), Expect = 0.57
Identities = 22/84 (26%), Positives = 39/84 (46%)
Frame = +2
Query: 92 RTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*WERL 271
R +A ++ + ++E + T K ++ H + + AR+ E ESV+ E
Sbjct: 738 RDSADRREKGKHEKEDRSRQTTKGSSSHS-SRRSRSPSARSRTKKESSSHRESVSSDEPS 796
Query: 272 TNSAKRKLSPSKTIVIPCPLRPTN 343
NS +RKL K+ + P P + N
Sbjct: 797 DNSKRRKLHSCKSSMSPSPPKSRN 820
>07_03_0439 + 18212584-18213065,18214164-18215010
Length = 442
Score = 29.1 bits (62), Expect = 1.0
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 8 EIASKTKDYFYDIDATEHLEAFIADCDRRTTAAKQRLAE 124
EIA KT+D+ ID+T+ EA I D ++ + +R +E
Sbjct: 372 EIAKKTRDWASAIDSTKRSEAKIDDLIKQYDSHSRRASE 410
>03_02_0583 + 9635002-9637299
Length = 765
Score = 28.7 bits (61), Expect = 1.3
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = +2
Query: 119 AETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEG 235
AE + S ++KA V EL +Q+G + A +G+EG
Sbjct: 214 AEFRLPRSLSASKKATRVQELIDQLGLRAAANTIIGDEG 252
>02_01_0369 + 2649178-2655291,2655773-2656601,2656737-2657425,
2657523-2657649,2657731-2657812,2658172-2658196
Length = 2621
Score = 28.7 bits (61), Expect = 1.3
Identities = 24/73 (32%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Frame = +2
Query: 38 YDIDATEHLEAFIADC-DRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARA 214
+D D +E F C D + K + A E L AE+ E VHE A+ + +L +A
Sbjct: 1873 FDTDPITKVENFSKFCLDLQNEVKKSKQAT--ELLLAELNE----VHERADNLQDELVKA 1926
Query: 215 EALGEEGMVEESV 253
EA E + SV
Sbjct: 1927 EAALSESFKQNSV 1939
>01_05_0491 -
22680011-22680125,22680210-22680307,22680392-22680472,
22680564-22680677,22680757-22680823,22680947-22681017,
22681099-22681236,22681324-22681530,22681630-22681773,
22681856-22682017,22682117-22682173,22682256-22682348,
22682425-22682542,22682678-22682817,22683031-22683590,
22683703-22683805
Length = 755
Score = 28.7 bits (61), Expect = 1.3
Identities = 18/56 (32%), Positives = 28/56 (50%)
Frame = +2
Query: 50 ATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAE 217
A EH A I C R AA++RLA + + E +A + E+ + + Q + AE
Sbjct: 123 AREHAAAVICQCAWRRRAARRRLARLR--IEQERAAEACRLREMVDVLQQAVEDAE 176
>04_04_0705 - 27406405-27406424,27406425-27409260
Length = 951
Score = 28.3 bits (60), Expect = 1.8
Identities = 18/51 (35%), Positives = 27/51 (52%)
Frame = +2
Query: 89 RRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMV 241
R +AAK++L E+SA + A + A IG+K+A A EEG +
Sbjct: 116 RELSAAKEQLGIRPAEVSASSSGGAGGLS--AAMIGRKIAEASHFVEEGEI 164
>03_05_0900 + 28627221-28629536
Length = 771
Score = 28.3 bits (60), Expect = 1.8
Identities = 15/34 (44%), Positives = 20/34 (58%)
Frame = -3
Query: 268 SLPLIDTLLDHTLFSECLSPSQFLPYLLCQFMNS 167
S PL+D LL L S C PS+ LP LL +++
Sbjct: 104 SPPLLDALLPFALSSSC--PSELLPALLSALLSA 135
>03_02_0582 + 9624481-9626844
Length = 787
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 119 AETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEG 235
AE + S EK V EL +Q+G K A +G+EG
Sbjct: 240 AEFRLPRSLPTREKKKRVKELIDQLGLKRAANTIIGDEG 278
>06_03_1373 +
29667871-29668782,29668872-29669851,29670156-29670350,
29670460-29670676
Length = 767
Score = 27.1 bits (57), Expect = 4.0
Identities = 17/58 (29%), Positives = 28/58 (48%)
Frame = +2
Query: 95 TTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*WER 268
T A + R+ E +EE + E +++ + L E + A E +G VEE N +R
Sbjct: 29 TGARRVRVGEDEEEAAREESQELHLQMPLGESRPRAAAAVEEKSLDGGVEEESNAGQR 86
>05_06_0219 + 26479708-26479710,26481045-26481173,26481675-26481818,
26481936-26482081,26482185-26482341,26482489-26482547,
26482787-26482946,26483020-26483169,26483279-26483415,
26483518-26483664,26483733-26483834,26483917-26483974,
26484084-26484185,26484322-26484379,26484717-26484775,
26486488-26486525,26486688-26486814,26486900-26487067,
26487879-26488010,26488089-26488198,26488273-26488333,
26488761-26488938,26489041-26489246,26489431-26489550,
26489631-26489729,26489968-26490156,26490291-26490430,
26491149-26491316,26491438-26491605,26491764-26491931,
26492250-26492417,26492533-26492700,26492853-26493020,
26493118-26493285,26493471-26493638,26493756-26493920,
26494679-26494850,26495012-26495175,26495296-26495405,
26495481-26495596,26495686-26495766,26495849-26496034,
26496203-26496547,26496637-26496777,26496869-26496916,
26497162-26497242,26497350-26497406,26497495-26497575,
26497675-26497757,26497842-26497968
Length = 2159
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/64 (20%), Positives = 31/64 (48%)
Frame = +2
Query: 62 LEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMV 241
LE I + R K+ ++ + + E+++ +HE+ ++ + A E + +V
Sbjct: 932 LEEHIEELSSRLCLEKKLRSDLENSKATEISKLQTTLHEMERRVEEARATQERESAKKVV 991
Query: 242 EESV 253
EE++
Sbjct: 992 EEAL 995
>05_05_0360 - 24395993-24397540,24397626-24397730,24398731-24399111
Length = 677
Score = 27.1 bits (57), Expect = 4.0
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Frame = +2
Query: 74 IADCDRRTTAAKQRLAETQEELSA-EVTEKANAVHELAEQIGQKLARAEALGEEGM 238
+++ +AAK+ L + ++E A E+ E+ ELA++I + A EAL E M
Sbjct: 286 VSELSELKSAAKRYLQDYEKERKARELMEEV--CDELAKEIAEDKAEVEALKSESM 339
>04_03_0283 +
13887388-13887573,13887711-13887806,13888517-13888637,
13888734-13888840,13888949-13889166,13890219-13890396,
13890492-13890611,13891601-13891687,13892401-13892511,
13892618-13893439
Length = 681
Score = 26.6 bits (56), Expect = 5.3
Identities = 12/32 (37%), Positives = 18/32 (56%)
Frame = +2
Query: 98 TAAKQRLAETQEELSAEVTEKANAVHELAEQI 193
TAA + + ETQE L A E A+ E +++
Sbjct: 532 TAASKAIQETQEALGASAKEIGIAIREAVDRV 563
>08_02_1027 + 23749400-23750698
Length = 432
Score = 26.2 bits (55), Expect = 7.1
Identities = 12/26 (46%), Positives = 18/26 (69%)
Frame = +2
Query: 107 KQRLAETQEELSAEVTEKANAVHELA 184
+++L + QEEL E EKA A+ E+A
Sbjct: 29 QEKLNKLQEELKNEKKEKARALDEIA 54
>06_03_1366 + 29601921-29602646
Length = 241
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/51 (29%), Positives = 26/51 (50%)
Frame = +2
Query: 95 TTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEE 247
T ++ L E++ T +A AV + E++G+++ GEE VEE
Sbjct: 106 TLRSRGGLRPLSEKMRPGETPEAAAVRAVREELGERVRVRILGGEEARVEE 156
>04_04_1065 + 30529555-30530076
Length = 173
Score = 26.2 bits (55), Expect = 7.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = +2
Query: 122 ETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEE 232
E++E+ AE EK E G+K A A A GEE
Sbjct: 7 ESKEKAVAEEEEKGVISPAATETAGEKKASAAAAGEE 43
>04_03_0939 + 20934694-20935050,20936324-20936519,20936645-20937708
Length = 538
Score = 26.2 bits (55), Expect = 7.1
Identities = 21/75 (28%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +2
Query: 41 DIDATEHLEAFIADCDRRTTAAKQRLAE--TQEELSAEVTEKAN--AVHELAEQIGQKLA 208
D+D HL A ++D R A +R AE + + A V E+A ++ + +
Sbjct: 444 DLDTVSHLVARLSDGIERENAMARRCAERVAADNVGAAAAAGGRFFPVQEMANELRRSCS 503
Query: 209 RAEALGEEGMVEESV 253
+ L EE +EE V
Sbjct: 504 SSRKLAEE--LEEHV 516
>02_05_0061 + 25506648-25509399,25509564-25509901,25510392-25510593,
25510779-25510854,25512036-25512294
Length = 1208
Score = 26.2 bits (55), Expect = 7.1
Identities = 13/46 (28%), Positives = 24/46 (52%)
Frame = +2
Query: 107 KQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVE 244
K+ LA+T+ + + ++ ++ G+ ARA GEEG +E
Sbjct: 1027 KELLADTKLSVRPKTSQPQEREESRRKKAGEAEARAHGGGEEGFME 1072
>01_07_0266 -
42406026-42406146,42406682-42406841,42407131-42407252,
42407355-42407467,42407844-42407964,42408030-42408144,
42408695-42408833
Length = 296
Score = 26.2 bits (55), Expect = 7.1
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = -2
Query: 50 HQCHRNNLWSWKLF 9
H C + LWSW LF
Sbjct: 83 HYCSQGELWSWTLF 96
>01_01_0285 - 2360799-2362631
Length = 610
Score = 26.2 bits (55), Expect = 7.1
Identities = 11/33 (33%), Positives = 18/33 (54%)
Frame = +2
Query: 2 DYEIASKTKDYFYDIDATEHLEAFIADCDRRTT 100
D+E+A K+KD Y D+ E + + D T+
Sbjct: 443 DHEMAQKSKDIIYSYDSDEEKVKKMIELDNSTS 475
>12_02_0431 - 19000267-19000719
Length = 150
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/24 (50%), Positives = 13/24 (54%)
Frame = +1
Query: 100 CC*ATSGGDTRRTVSRSDGESQCC 171
CC + GG RR SDGE CC
Sbjct: 97 CCVSACGGRRRRR--GSDGEEVCC 118
>06_03_0840 + 25293314-25293838
Length = 174
Score = 25.8 bits (54), Expect = 9.3
Identities = 20/64 (31%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Frame = +2
Query: 92 RTTAAKQRLAETQE--ELSAEVTEKANAVHELAEQIGQKLARAEALGEEG--MVEESVN* 259
R +A + R+ ++ ELS+ V E A H LA ++ + AR + E + EE+
Sbjct: 79 RESARRSRVRRRRQLDELSSHVAELRAANHRLAVELNRAAARHAQMARENARLAEEARAL 138
Query: 260 WERL 271
ERL
Sbjct: 139 RERL 142
>04_04_1152 -
31289365-31289457,31289559-31289637,31289716-31289758,
31289846-31290037,31290302-31290377,31290482-31290535,
31291274-31291342,31291437-31291700
Length = 289
Score = 25.8 bits (54), Expect = 9.3
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 6/61 (9%)
Frame = +2
Query: 74 IADCDRRTTAAKQRLAETQEELSAEVTEKANAVHE------LAEQIGQKLARAEALGEEG 235
+AD DR + RLA++ L A + E A E A+++ + LA+ EA ++
Sbjct: 60 LADRDRAEADLRARLADSDARLLAALDENAKLAKERDSLASTAKKMARNLAKLEAFKKQL 119
Query: 236 M 238
M
Sbjct: 120 M 120
>01_06_0680 + 31132683-31133499,31133597-31134717,31134811-31135713
Length = 946
Score = 25.8 bits (54), Expect = 9.3
Identities = 12/26 (46%), Positives = 17/26 (65%)
Frame = +2
Query: 170 VHELAEQIGQKLARAEALGEEGMVEE 247
V ++ E+IG++ A E GEEG EE
Sbjct: 349 VEDVDEEIGEENAEEEEEGEEGADEE 374
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,964,050
Number of Sequences: 37544
Number of extensions: 123096
Number of successful extensions: 417
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 411
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 417
length of database: 14,793,348
effective HSP length: 73
effective length of database: 12,052,636
effective search space used: 506210712
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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