Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00296
(348 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.028
SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.26
SB_21505| Best HMM Match : Topoisom_I (HMM E-Value=9.90001e-40) 31 0.34
SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.34
SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08) 30 0.45
SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 0.78
SB_25538| Best HMM Match : Kinesin (HMM E-Value=0) 29 1.0
SB_14298| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 1.0
SB_17585| Best HMM Match : Ribosomal_L23 (HMM E-Value=3.3) 29 1.4
SB_45734| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10) 28 2.4
SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 2.4
SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2) 28 2.4
SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14) 27 3.2
SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11) 27 3.2
SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 3.2
SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56) 27 4.2
SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19) 27 4.2
SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3) 27 4.2
SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09) 27 5.5
SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4) 26 7.3
SB_23344| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 7.3
SB_15237| Best HMM Match : NHL (HMM E-Value=0) 26 7.3
SB_47633| Best HMM Match : Ank (HMM E-Value=1.7e-28) 26 9.7
SB_11248| Best HMM Match : LMP (HMM E-Value=0.18) 26 9.7
SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.) 26 9.7
>SB_46602| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1805
Score = 34.3 bits (75), Expect = 0.028
Identities = 26/97 (26%), Positives = 45/97 (46%)
Frame = +2
Query: 26 KDYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKL 205
KD I E LE+ +R + + LAETQ+ L E K + +L + + +
Sbjct: 1212 KDLEVQISMVESLESKHTALERSKKSLEDTLAETQDSLQEETHHKLMIISKLKDVENEIV 1271
Query: 206 ARAEALGEEGMVEESVN*WERLTNSAKRKLSPSKTIV 316
+ E L EE EE+ + ++ SA+ + + K +V
Sbjct: 1272 SLQEQLEEE---EENKSALQKQLQSAQTQCAEMKKVV 1305
>SB_24812| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1384
Score = 31.1 bits (67), Expect = 0.26
Identities = 14/61 (22%), Positives = 29/61 (47%)
Frame = +2
Query: 2 DYEIASKTKDYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHEL 181
DY + +++K Y+ + + E L + I + R K ++ +E ++ K A E+
Sbjct: 721 DYSVTTESKQYYVNAENEETLRSEINELRRENEGLKAKIEAMEENINLHKIYKTEAKDEI 780
Query: 182 A 184
A
Sbjct: 781 A 781
>SB_21505| Best HMM Match : Topoisom_I (HMM E-Value=9.90001e-40)
Length = 372
Score = 30.7 bits (66), Expect = 0.34
Identities = 18/44 (40%), Positives = 26/44 (59%)
Frame = +2
Query: 86 DRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAE 217
++RTT+ + L+E E LSA+V NA L +Q+ QKL E
Sbjct: 79 EKRTTSVNKYLSELMEGLSAKVFRTFNASLTLQDQL-QKLTNPE 121
>SB_4237| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1438
Score = 30.7 bits (66), Expect = 0.34
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Frame = +2
Query: 47 DATEHLEAFIADCDRRTTAAKQRL--AETQEELSAEVTEKANAVHELAEQIGQKLARAEA 220
D E +EA + AK + AETQ E + +E+A+A E AE + K+ +AEA
Sbjct: 883 DQVEEVEAPVEKAAASVEEAKVPMEEAETQAEDTEGTSEEADASVEKAETLVVKMEQAEA 942
Query: 221 LGEE 232
EE
Sbjct: 943 SVEE 946
>SB_12729| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.3e-08)
Length = 1183
Score = 30.3 bits (65), Expect = 0.45
Identities = 14/46 (30%), Positives = 26/46 (56%)
Frame = +2
Query: 47 DATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELA 184
D +L+ A+ + AAK++L+E ++ +SA EK HE++
Sbjct: 8 DQVSYLKKEKAEVEHGLVAAKRKLSELEDAISANKREKMEKDHEIS 53
>SB_24813| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1218
Score = 29.5 bits (63), Expect = 0.78
Identities = 19/61 (31%), Positives = 30/61 (49%)
Frame = +2
Query: 65 EAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVE 244
E F+ + + A + AE +++ E+TE A HE E +G + AR +A EE
Sbjct: 238 EHFMEEKAKLLQNAAREKAELEQKYLDEITELRQAFHE-GEAVGGEYAREKAQLEESYFR 296
Query: 245 E 247
E
Sbjct: 297 E 297
>SB_25538| Best HMM Match : Kinesin (HMM E-Value=0)
Length = 711
Score = 29.1 bits (62), Expect = 1.0
Identities = 21/59 (35%), Positives = 28/59 (47%)
Frame = +2
Query: 56 EHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEE 232
E L+A +D +R T AE+ E EV E A+ ELA QKL +A +E
Sbjct: 368 ESLKASRSDNERLQTQINSIQAES-ETSKTEVKEVLQALEELAVNYDQKLQEVDAKNKE 425
>SB_14298| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 427
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 8 EIASKTKDYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAE 187
++ T Y Y A EH++ + +C R + + A T E+ + + A+ VH E
Sbjct: 130 DVTHYTVQYLYST-ALEHVDICLRNCSRNSRTPFAKFANTVREIHEQRSRTAD-VH---E 184
Query: 188 QIG-QKLARAEALGEEG 235
Q G +L + G+ G
Sbjct: 185 QTGTNRLTNGNSFGDAG 201
>SB_17585| Best HMM Match : Ribosomal_L23 (HMM E-Value=3.3)
Length = 193
Score = 28.7 bits (61), Expect = 1.4
Identities = 11/30 (36%), Positives = 20/30 (66%)
Frame = +2
Query: 227 EEGMVEESVN*WERLTNSAKRKLSPSKTIV 316
+EG E VN WE L ++A++ +SP +++
Sbjct: 112 DEGQAAEFVNEWEHLNSNAEKIMSPPWSVL 141
>SB_45734| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 232
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/50 (26%), Positives = 29/50 (58%)
Frame = +2
Query: 86 DRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEG 235
D++ +Q+ + + ++ ++ + N+ LAEQI Q++A +A+G G
Sbjct: 130 DKKQNIKQQQPDDGIQRMNVDINDP-NSASRLAEQIKQQIAEQQAMGGGG 178
>SB_44315| Best HMM Match : M (HMM E-Value=2.2e-10)
Length = 2155
Score = 27.9 bits (59), Expect = 2.4
Identities = 17/74 (22%), Positives = 36/74 (48%), Gaps = 2/74 (2%)
Frame = +2
Query: 5 YEIASKTKDYFYDI--DATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHE 178
YE AS+ + D E L+ ++ D + + K+ + T+EEL ++ + +
Sbjct: 151 YESASRDLNVTLDDLRSKNEQLQRQLSQKDNQLQSMKEDVKNTEEELKLDLEKVIQEKED 210
Query: 179 LAEQIGQKLARAEA 220
LAE ++ A+ ++
Sbjct: 211 LAESFREEKAKLDS 224
>SB_30637| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1137
Score = 27.9 bits (59), Expect = 2.4
Identities = 16/82 (19%), Positives = 38/82 (46%)
Frame = +2
Query: 47 DATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALG 226
D+ EH E F + +T ++++ + Q+E+ + E+ + E+ +K + +
Sbjct: 1017 DSVEHAEQFAKETFDKTKEGEKKMKDEQDEIERKKAEEEEKKRKEEEESKKKDEKEKEEE 1076
Query: 227 EEGMVEESVN*WERLTNSAKRK 292
+E EE + T+ ++ K
Sbjct: 1077 DEDEEEEEEKKEDAKTDDSETK 1098
>SB_29635| Best HMM Match : E-MAP-115 (HMM E-Value=1.2)
Length = 2658
Score = 27.9 bits (59), Expect = 2.4
Identities = 13/49 (26%), Positives = 25/49 (51%)
Frame = +2
Query: 77 ADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEAL 223
ADCD TAA+Q + T +++S + +K + Q G + + ++
Sbjct: 1050 ADCDVTFTAAEQEMMRTLKKVSTKGKDKRSPPRSGPSQAGSQTGESSSI 1098
>SB_34261| Best HMM Match : efhand (HMM E-Value=5.3e-14)
Length = 148
Score = 27.5 bits (58), Expect = 3.2
Identities = 18/61 (29%), Positives = 29/61 (47%)
Frame = +2
Query: 68 AFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEE 247
A I D + R A+ + + S +TE NA+H L E + + AE L G+ E+
Sbjct: 2 AKIEKLDDEQLSLAYRKADLRNKGSLNITEFKNALHTLGEDVKED-TLAELLKRAGIEED 60
Query: 248 S 250
+
Sbjct: 61 A 61
>SB_1305| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.8e-11)
Length = 1491
Score = 27.5 bits (58), Expect = 3.2
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 3/82 (3%)
Frame = +2
Query: 74 IADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEE---GMVE 244
I D + AK+ EEL V + H+L +++ Q R EAL +E +
Sbjct: 871 IQDLEGELCHAKEEGRSLSEELEKAVEGARDIEHDLNDKLEQTSKRYEALLDELTAKLET 930
Query: 245 ESVN*WERLTNSAKRKLSPSKT 310
E + ERLT + + KT
Sbjct: 931 EKMELQERLTKNNEEMQERMKT 952
>SB_43457| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 464
Score = 27.5 bits (58), Expect = 3.2
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
Frame = +2
Query: 110 QRLAETQEELSAEVTEKANAVHE-LAEQIGQKLARAEALGEEGMVEESVN*WERLTNSAK 286
++L + ++L E + E A Q QKL + EAL E V++ + +S K
Sbjct: 376 RQLHQRNQKLLDECASAFQSYQEAFAAQRKQKLEKQEALAELEQVKQEYEAVKMEVSSLK 435
Query: 287 RKLSPSKTIV 316
K + SKT++
Sbjct: 436 SKNADSKTLI 445
>SB_13311| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6406
Score = 27.5 bits (58), Expect = 3.2
Identities = 22/66 (33%), Positives = 36/66 (54%)
Frame = +2
Query: 113 RLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*WERLTNSAKRK 292
R +T+EE AE EK + E++ + L + EE M ++ + ++RLT SAKR+
Sbjct: 5850 RWIQTKEEALAE-KEKEPIPDDDYEEVHRLLEEHKVFQEE-MAKKQPS-YDRLTKSAKRR 5906
Query: 293 LSPSKT 310
+ S T
Sbjct: 5907 TNGSTT 5912
>SB_29369| Best HMM Match : GIY-YIG (HMM E-Value=0.56)
Length = 785
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 50 ATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKA 163
AT+HL+ +C+R+ A+ Q L + L T A
Sbjct: 155 ATKHLKLLTRECNRKIAASSQELLHHRTLLERSCTNNA 192
>SB_27572| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.1e-19)
Length = 3107
Score = 27.1 bits (57), Expect = 4.2
Identities = 18/80 (22%), Positives = 39/80 (48%)
Frame = +2
Query: 8 EIASKTKDYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAE 187
EI+S +++ DA E L+ + + R ++ + E + ++ + N ++ E
Sbjct: 2459 EISSLSRNLIQQRDAAEALQQEKSTLEDRIVGLRKENS-LLESSNRDLKAERNRLNTEVE 2517
Query: 188 QIGQKLARAEALGEEGMVEE 247
Q+G+K EA+ +E E+
Sbjct: 2518 QLGRKNVELEAMLDEAQEEK 2537
>SB_18427| Best HMM Match : Peptidase_C54 (HMM E-Value=1.3)
Length = 535
Score = 27.1 bits (57), Expect = 4.2
Identities = 12/38 (31%), Positives = 19/38 (50%)
Frame = +2
Query: 50 ATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKA 163
AT+HL+ +C+R+ A+ Q L + L T A
Sbjct: 154 ATKHLKLLTRECNRKIAASSQELLHHRTLLERSCTNNA 191
>SB_13109| Best HMM Match : Dynein_heavy (HMM E-Value=2.6e-09)
Length = 1703
Score = 26.6 bits (56), Expect = 5.5
Identities = 19/59 (32%), Positives = 30/59 (50%), Gaps = 6/59 (10%)
Frame = +2
Query: 65 EAFIADCDRRTTAAKQRLAETQEELSA------EVTEKANAVHELAEQIGQKLARAEAL 223
EA +A+ A ++ LAE + +L+A E+TEK + + +KL RAE L
Sbjct: 985 EASLAETMSLLNAKRRELAEVEAKLAALKSQFQEMTEKKENLEFQVDLCSKKLVRAEKL 1043
>SB_36932| Best HMM Match : HTH_8 (HMM E-Value=1.4)
Length = 721
Score = 26.2 bits (55), Expect = 7.3
Identities = 25/75 (33%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Frame = +2
Query: 86 DRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*W- 262
DR T + + QEE + T++ A + + E +KL AE G E VE +
Sbjct: 68 DRNTASVLRAKIRKQEEELRKETQRKQARNRMQELRKRKL--AEESGPEPEVEFMTPAFS 125
Query: 263 ERLTNS-AKRKLSPS 304
R+T AK K+SPS
Sbjct: 126 SRMTRKRAKDKVSPS 140
>SB_23344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 458
Score = 26.2 bits (55), Expect = 7.3
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 238 HTLFSECLSPSQFLPYLL 185
HT F +CL PS+ L +LL
Sbjct: 132 HTFFKDCLVPSRSLGFLL 149
>SB_15237| Best HMM Match : NHL (HMM E-Value=0)
Length = 997
Score = 26.2 bits (55), Expect = 7.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = +2
Query: 116 LAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEE 247
LA+ + +S EVTE + + ++ Q + AE L E+G E
Sbjct: 504 LAKIRAAMSIEVTEHKTRIRDFNKETSQVIEYAENLLEKGSTLE 547
>SB_47633| Best HMM Match : Ank (HMM E-Value=1.7e-28)
Length = 353
Score = 25.8 bits (54), Expect = 9.7
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 2/67 (2%)
Frame = +2
Query: 11 IASKTKDYFYDIDATEHLEAF-IADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELA- 184
+A K DYF+ ID + F I DR T +K + A + +A HEL
Sbjct: 280 LALKALDYFHYIDRSRRKHYFYINYLDRTTPESKDKDAASTHAQTALSAVVEGGYHELVM 339
Query: 185 EQIGQKL 205
+ QKL
Sbjct: 340 HPVFQKL 346
>SB_11248| Best HMM Match : LMP (HMM E-Value=0.18)
Length = 442
Score = 25.8 bits (54), Expect = 9.7
Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 3/44 (6%)
Frame = +2
Query: 74 IADCDRRTTAAKQRLAETQEELS---AEVTEKANAVHELAEQIG 196
IADC R + + +LAE +++L+ E+ + + + QIG
Sbjct: 168 IADCQRTLESLQAKLAEREQQLTDAQDEIGHQERKIEDSRAQIG 211
>SB_51696| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 401
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/41 (36%), Positives = 23/41 (56%), Gaps = 2/41 (4%)
Frame = +2
Query: 101 AAKQRLAETQEELSAEVTEKANAVHEL--AEQIGQKLARAE 217
A++QR+ EL A + + AVHEL QI + +A+ E
Sbjct: 284 ASQQRMHAVPSELLAFICTPSTAVHELFGVGQIAEMVAKRE 324
>SB_48387| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 941
Score = 25.8 bits (54), Expect = 9.7
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 56 EHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGE-E 232
E LE AD A + A+ EE+ +T+K +L + + + RA + E E
Sbjct: 494 EKLEKHKADLAAEVAKANKAKADNAEEIRHLLTQKEETQGKLKKVVAEFNERANDIAELE 553
Query: 233 GMVEE 247
G++++
Sbjct: 554 GLLKK 558
>SB_14816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 3760
Score = 25.8 bits (54), Expect = 9.7
Identities = 15/48 (31%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +2
Query: 110 QRLAETQEELSAE---VTEKANAVHELAEQIGQKLARAEALGEEGMVE 244
+ L +EL A+ EK +H++ + IG+ +E GEE VE
Sbjct: 872 ESLKADDDELKAKCEKAEEKLKEIHKMLDDIGKLSPSSEEEGEEEKVE 919
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,947,361
Number of Sequences: 59808
Number of extensions: 133193
Number of successful extensions: 481
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 448
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 481
length of database: 16,821,457
effective HSP length: 73
effective length of database: 12,455,473
effective search space used: 523129866
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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