Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00296
(348 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing prote... 44 3e-05
At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing prote... 44 3e-05
At2g20950.4 68415.m02474 expressed protein 33 0.069
At2g20950.3 68415.m02473 expressed protein 33 0.069
At2g20950.2 68415.m02472 expressed protein 33 0.069
At2g20950.1 68415.m02471 expressed protein 33 0.069
At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing prote... 32 0.12
At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing prote... 31 0.16
At1g72100.1 68414.m08334 late embryogenesis abundant domain-cont... 30 0.49
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 29 0.64
At5g10680.1 68418.m01236 calmodulin-binding protein-related cont... 29 0.85
At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesi... 28 1.5
At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ... 27 2.6
At3g50370.1 68416.m05508 expressed protein 27 3.4
At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar... 27 4.5
At5g10660.1 68418.m01234 calmodulin-binding protein-related cont... 27 4.5
At1g50660.1 68414.m05696 expressed protein similar to liver stag... 27 4.5
At1g34420.1 68414.m04275 leucine-rich repeat family protein / pr... 27 4.5
At1g09450.1 68414.m01057 haspin-related similar to haspin (GI:92... 27 4.5
At1g79350.1 68414.m09247 DNA-binding protein, putative contains ... 26 6.0
At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR... 26 7.9
At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR... 26 7.9
At5g15880.1 68418.m01858 expressed protein 26 7.9
At4g27060.1 68417.m03891 expressed protein 26 7.9
At4g26630.1 68417.m03837 expressed protein 26 7.9
>At5g51410.2 68418.m06374 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +2
Query: 38 YDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEV--TEKANAVHELAEQIGQKLAR 211
++ + + E + D DR+ ++RLA+ E + EKA + L E++ L +
Sbjct: 85 FEAELAQFCEKLVNDLDRKVRRGRERLAQEVEPVPPPSLSAEKAEQLSVLEEKVKNLLEQ 144
Query: 212 AEALGEEGMVEESVN*WERLTNSAKRKLSPSKTIVIPCP 328
EALGEEG V+E+ E L + L+ KT+++ P
Sbjct: 145 VEALGEEGKVDEA----EALMRKVE-GLNAEKTVLLQRP 178
>At5g51410.1 68418.m06373 LUC7 N_terminus domain-containing protein
similar to cisplatin resistance-associated overexpressed
protein [Homo sapiens] GI:6899846; contains Pfam profile
PF03194: LUC7 N_terminus
Length = 334
Score = 44.0 bits (99), Expect = 3e-05
Identities = 29/99 (29%), Positives = 50/99 (50%), Gaps = 2/99 (2%)
Frame = +2
Query: 38 YDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEV--TEKANAVHELAEQIGQKLAR 211
++ + + E + D DR+ ++RLA+ E + EKA + L E++ L +
Sbjct: 85 FEAELAQFCEKLVNDLDRKVRRGRERLAQEVEPVPPPSLSAEKAEQLSVLEEKVKNLLEQ 144
Query: 212 AEALGEEGMVEESVN*WERLTNSAKRKLSPSKTIVIPCP 328
EALGEEG V+E+ E L + L+ KT+++ P
Sbjct: 145 VEALGEEGKVDEA----EALMRKVE-GLNAEKTVLLQRP 178
>At2g20950.4 68415.m02474 expressed protein
Length = 530
Score = 32.7 bits (71), Expect = 0.069
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 80 DCDRRTTAAKQRLAETQEEL---SAEVTEKANAVHELAEQIGQ 199
+CDR TA K+ + E +EEL E E V ELA ++GQ
Sbjct: 458 ECDREMTAGKKEMEEMREELRRREKETKECRERVTELAGRLGQ 500
>At2g20950.3 68415.m02473 expressed protein
Length = 505
Score = 32.7 bits (71), Expect = 0.069
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 80 DCDRRTTAAKQRLAETQEEL---SAEVTEKANAVHELAEQIGQ 199
+CDR TA K+ + E +EEL E E V ELA ++GQ
Sbjct: 433 ECDREMTAGKKEMEEMREELRRREKETKECRERVTELAGRLGQ 475
>At2g20950.2 68415.m02472 expressed protein
Length = 503
Score = 32.7 bits (71), Expect = 0.069
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 80 DCDRRTTAAKQRLAETQEEL---SAEVTEKANAVHELAEQIGQ 199
+CDR TA K+ + E +EEL E E V ELA ++GQ
Sbjct: 431 ECDREMTAGKKEMEEMREELRRREKETKECRERVTELAGRLGQ 473
>At2g20950.1 68415.m02471 expressed protein
Length = 520
Score = 32.7 bits (71), Expect = 0.069
Identities = 18/43 (41%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
Frame = +2
Query: 80 DCDRRTTAAKQRLAETQEEL---SAEVTEKANAVHELAEQIGQ 199
+CDR TA K+ + E +EEL E E V ELA ++GQ
Sbjct: 448 ECDREMTAGKKEMEEMREELRRREKETKECRERVTELAGRLGQ 490
>At5g17440.1 68418.m02046 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: Protein of unknown
function, DUF259
Length = 404
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 EQIGQKLARAEALGEEGMVEES 250
E I +KL +AE LGE+GMV+E+
Sbjct: 208 EMINEKLKKAEELGEQGMVDEA 229
>At3g03340.1 68416.m00332 LUC7 N_terminus domain-containing protein
contains Pfam domain PF03194: LUC7 N_terminus
Length = 402
Score = 31.5 bits (68), Expect = 0.16
Identities = 13/22 (59%), Positives = 18/22 (81%)
Frame = +2
Query: 185 EQIGQKLARAEALGEEGMVEES 250
E I +KL +AE LGE+GMV+E+
Sbjct: 208 EMINEKLKKAEDLGEQGMVDEA 229
>At1g72100.1 68414.m08334 late embryogenesis abundant
domain-containing protein / LEA domain-containing
protein low similarity to embryogenic gene [Betula
pendula] GI:4539485; contains Pfam profile PF02987: Late
embryogenesis abundant protein
Length = 480
Score = 29.9 bits (64), Expect = 0.49
Identities = 19/73 (26%), Positives = 34/73 (46%)
Frame = +2
Query: 104 AKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*WERLTNSA 283
AK+++ E ++ V +KA HE E+ ++ +E +S N WER+ N A
Sbjct: 237 AKEKVREKAHDVKETVAQKA---HESKERAKDRVREKAQELKETATHKSKNAWERVKNGA 293
Query: 284 KRKLSPSKTIVIP 322
+ S + + P
Sbjct: 294 REFGSATAATLSP 306
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 29.5 bits (63), Expect = 0.64
Identities = 19/60 (31%), Positives = 29/60 (48%)
Frame = +2
Query: 65 EAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVE 244
E+F+ D A + R+ LSAE+ EK+N EL + + L + E E G +E
Sbjct: 540 ESFLQGKDE-VNALQNRIESVSMSLSAEMEEKSNIRKEL-DDLSFSLKKMEETAERGSLE 597
>At5g10680.1 68418.m01236 calmodulin-binding protein-related
contains weak similarity to calmodulin-binding proteins
Length = 241
Score = 29.1 bits (62), Expect = 0.85
Identities = 18/70 (25%), Positives = 32/70 (45%)
Frame = +2
Query: 44 IDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEAL 223
+D E+ E D ++ + ++E AEV E+ + + E+ + A+ E L
Sbjct: 164 VDDEENSETVATTTDMNEAVNFEKSKQEEQE-EAEVKEEESESSRVKEETAETKAQIEEL 222
Query: 224 GEEGMVEESV 253
EEG +E V
Sbjct: 223 PEEGTKKEGV 232
>At4g05190.1 68417.m00781 kinesin-like protein A, putative kinesin
like protein A, Arabidopsis thaliana, gb:Q07970
Length = 790
Score = 28.3 bits (60), Expect = 1.5
Identities = 19/85 (22%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Frame = +2
Query: 56 EHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIG-QKLARAEALGEE 232
E+L + + ++R + + +EEL A +TE + L E++ +KL++ +A+
Sbjct: 118 ENLSSSLQSAEKRYSDKELDAKTKEEELRATITEMKENIESLQEKLSKEKLSKLDAIENH 177
Query: 233 GMVEESVN*WERLTNSAKRKLSPSK 307
++ E+L S + +L K
Sbjct: 178 RREKDCRVVAEKLQVSLREELDKVK 202
>At4g26120.1 68417.m03760 ankyrin repeat family protein / BTB/POZ
domain-containing protein contains Pfam domain, PF00023:
Ankyrin repeat and Pfam domain, PF00651: BTB/POZ domain
Length = 600
Score = 27.5 bits (58), Expect = 2.6
Identities = 14/43 (32%), Positives = 19/43 (44%)
Frame = +2
Query: 29 DYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTE 157
D+F D + HL + D + KQR E QE L +E
Sbjct: 514 DHFMDTEDLNHLASVEEDTPEKRLQKKQRYMELQETLMKTFSE 556
>At3g50370.1 68416.m05508 expressed protein
Length = 2179
Score = 27.1 bits (57), Expect = 3.4
Identities = 20/74 (27%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Frame = +2
Query: 86 DRRTTAAKQRLAETQEELS---AEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN 256
+RR AAKQ+L E +E++S AE + ++ ++E + + + + E+S
Sbjct: 560 ERRKQAAKQKLLELEEKISRRQAEAAKGCSSSSTISEDKFLDIVKEKDSADVVDWEDSER 619
Query: 257 *WERLTNSAKRKLS 298
+R+T S+ LS
Sbjct: 620 MVDRITTSSTLDLS 633
>At5g63770.1 68418.m08004 diacylglycerol kinase, putative similar to
diacylglycerol kinase, theta (diglyceride kinase, DGK-
theta, DAG kinase theta). [Homo sapiens]
SWISS-PROT:P52824
Length = 712
Score = 26.6 bits (56), Expect = 4.5
Identities = 10/26 (38%), Positives = 14/26 (53%), Gaps = 1/26 (3%)
Frame = +3
Query: 171 FMNWQSK*GRNWL-GLRHSEKRVWSR 245
F+ WQ K NW+ +K+VW R
Sbjct: 40 FLKWQKKTSLNWVKAAAREKKKVWKR 65
>At5g10660.1 68418.m01234 calmodulin-binding protein-related
contains weak similarity to calmodulin-binding proteins
Length = 407
Score = 26.6 bits (56), Expect = 4.5
Identities = 19/69 (27%), Positives = 28/69 (40%)
Frame = +2
Query: 47 DATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALG 226
D E+ E D + E ++E AEV E+ E+ + +A+ E L
Sbjct: 294 DDEENSETVATTTDMNEAVNVEESKEEEKE-EAEVKEEEGESSAAKEETTETMAQVEELP 352
Query: 227 EEGMVEESV 253
EEG E V
Sbjct: 353 EEGTKNEVV 361
>At1g50660.1 68414.m05696 expressed protein similar to liver stage
antigen-1 (GI:510184) [Plasmodium falciparum]; similar
to Myosin II heavy chain, non muscle (Swiss-Prot:P08799)
[Dictyostelium discoideum]; similar to liver stage
antigen (GI:9916) [Plasmodium falciparum]; similar to
Kinesin-like protein KLPA (Swiss-Prot:P28739)
[Emericella nidulans]
Length = 725
Score = 26.6 bits (56), Expect = 4.5
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Frame = +2
Query: 101 AAKQRLAETQEELSA-EVTEKANAVHELAEQIGQKLARAEALGEEGM-VEESVN*WERLT 274
A K+ + + ++E A E+ E+ ELA++IG+ A EAL E M + E V+ R+
Sbjct: 327 AVKRYMQDYEKERKARELIEEV--CDELAKEIGEDKAEIEALKRESMSLREEVDDERRML 384
Query: 275 NSAK 286
A+
Sbjct: 385 QMAE 388
>At1g34420.1 68414.m04275 leucine-rich repeat family protein /
protein kinase family protein contains leucine rich
repeat (LRR) domains, Pfam:PF00560; contains protein
kinase domain, Pfam:PF00069
Length = 966
Score = 26.6 bits (56), Expect = 4.5
Identities = 18/47 (38%), Positives = 25/47 (53%)
Frame = -3
Query: 322 WNYDSLARR*LSFCGVRQSLPLIDTLLDHTLFSECLSPSQFLPYLLC 182
WN R S+ GV SLP +++ +L + LS S FLP L+C
Sbjct: 59 WNLPGSERNPCSWNGVLCSLPDNSSVISLSLSNFDLSNSSFLP-LVC 104
>At1g09450.1 68414.m01057 haspin-related similar to haspin
(GI:9229937) {Mus musculus} and haploid germ
cell-specific nuclear protein kinase (GI:13561418) {Mus
musculus}
Length = 599
Score = 26.6 bits (56), Expect = 4.5
Identities = 22/78 (28%), Positives = 33/78 (42%)
Frame = +2
Query: 20 KTKDYFYDIDATEHLEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQ 199
K K+YF DIDA E LE + T +++ LS + EK +L G
Sbjct: 110 KEKEYFRDIDAFELLEESPSPNKSSTWTMGEQVVPEMPHLSTRL-EKWLISKKLNHTCGP 168
Query: 200 KLARAEALGEEGMVEESV 253
++ L + +ESV
Sbjct: 169 SSTLSKILENSAIHQESV 186
>At1g79350.1 68414.m09247 DNA-binding protein, putative contains
Pfam PF00628: PHD-finger domain; contains TIGRFAMS
TIGR01053: zinc finger domain, LSD1 subclass; contains
Pfam PF00271: Helicase conserved C-terminal domain;
similar to WSSV086 (GI:19481678)[shrimp white spot
syndrome virus]; similar to nuclear protein Np95
(GI:17939938) [Mus musculus]
Length = 1299
Score = 26.2 bits (55), Expect = 6.0
Identities = 16/62 (25%), Positives = 32/62 (51%)
Frame = +2
Query: 71 FIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEES 250
+IA+ +R AA +R ++ E + + + N + ++ +Q+G AE G GM+ +
Sbjct: 762 YIAELQKRYEAALERKSKIIEIIRS-LNLPNNPLDDIVDQLGGPEKVAEMTGRRGMLVRA 820
Query: 251 VN 256
N
Sbjct: 821 SN 822
>At5g51630.2 68418.m06402 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1175
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 155 EKANAVHELAEQIGQKLARAEALGEEG 235
+K +H L +++G+K+ R E+ G G
Sbjct: 409 DKTVEMHSLLQKLGRKIVRDESFGNPG 435
>At5g51630.1 68418.m06401 disease resistance protein (TIR-NBS-LRR
class), putative domain signature TIR-NBS-LRR exists,
suggestive of a disease resistance protein.
Length = 1229
Score = 25.8 bits (54), Expect = 7.9
Identities = 9/27 (33%), Positives = 17/27 (62%)
Frame = +2
Query: 155 EKANAVHELAEQIGQKLARAEALGEEG 235
+K +H L +++G+K+ R E+ G G
Sbjct: 473 DKTVEMHSLLQKLGRKIVRDESFGNPG 499
>At5g15880.1 68418.m01858 expressed protein
Length = 348
Score = 25.8 bits (54), Expect = 7.9
Identities = 22/77 (28%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Frame = +2
Query: 62 LEAFIADCDRRTTAAKQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEAL-GEEGM 238
+E + D +R ++R + E T +H L EQ+ K A+AE + GE +
Sbjct: 202 MEEKVQDLERSWAVIQERALKQPSPAQREKTLDKQ-LHSLIEQLAAKQAQAEGIVGEIHL 260
Query: 239 VEESVN*WERLTNSAKR 289
E + ERL N +R
Sbjct: 261 NEMEL---ERLNNLWRR 274
>At4g27060.1 68417.m03891 expressed protein
Length = 864
Score = 25.8 bits (54), Expect = 7.9
Identities = 13/23 (56%), Positives = 16/23 (69%)
Frame = -3
Query: 247 LLDHTLFSECLSPSQFLPYLLCQ 179
LLDH+L+ CLS SQ L L+ Q
Sbjct: 784 LLDHSLYDICLSWSQQLLELVLQ 806
>At4g26630.1 68417.m03837 expressed protein
Length = 763
Score = 25.8 bits (54), Expect = 7.9
Identities = 16/68 (23%), Positives = 34/68 (50%)
Frame = +2
Query: 107 KQRLAETQEELSAEVTEKANAVHELAEQIGQKLARAEALGEEGMVEESVN*WERLTNSAK 286
K++L E + L +T+ ++ ++ + L + G+ + +V+ E+ + AK
Sbjct: 420 KEKLWEFCDVLDIHITKATTKKEDIITKLFEFLEKPHVTGDV-TGDTTVSEKEKSSKGAK 478
Query: 287 RKLSPSKT 310
RK +P KT
Sbjct: 479 RKRTPKKT 486
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,287,851
Number of Sequences: 28952
Number of extensions: 95535
Number of successful extensions: 351
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 342
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 349
length of database: 12,070,560
effective HSP length: 72
effective length of database: 9,986,016
effective search space used: 429398688
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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