Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00295
         (754 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic t...   137   2e-32
AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p pro...   135   5e-32
AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic i...   135   5e-32
AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB...   135   5e-32
AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA...   135   5e-32
AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p pro...    31   2.2  
AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-P...    31   2.2  
BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p pro...    29   6.8  
AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-P...    29   6.8  
BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p pro...    29   9.0  
AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-P...    29   9.0  

>AF187730-1|AAG17032.1|  159|Drosophila melanogaster eukaryotic
           translation initiationfactor 5a protein.
          Length = 159

 Score =  137 bits (331), Expect = 2e-32
 Identities = 65/91 (71%), Positives = 74/91 (81%)
 Frame = +2

Query: 257 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 436
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM D+GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTDSGDLREDLKVPEGELGEQLRLD 128

Query: 437 FDSGKELLCTVLKSWR*GVRHRRQANTALDK 529
           FDSGK+LLCTVLK+         + NTALDK
Sbjct: 129 FDSGKDLLCTVLKACGEECVIAIKTNTALDK 159



 Score =  126 bits (304), Expect = 3e-29
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +3

Query: 51  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 230
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 231 VGIDIFNGKSMKISVP 278
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY071396-1|AAL49018.1|  159|Drosophila melanogaster RE47768p
           protein.
          Length = 159

 Score =  135 bits (327), Expect = 5e-32
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 257 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 436
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 437 FDSGKELLCTVLKSWR*GVRHRRQANTALDK 529
           FDSGK+LLCTVLK+         + NTALDK
Sbjct: 129 FDSGKDLLCTVLKACGEECVIAIKTNTALDK 159



 Score =  123 bits (296), Expect = 3e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +3

Query: 51  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 230
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 231 VGIDIFNGKSMKISVP 278
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AF159443-1|AAF80375.1|  159|Drosophila melanogaster eukaryotic
           initiation factor 5A protein.
          Length = 159

 Score =  135 bits (327), Expect = 5e-32
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 257 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 436
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 437 FDSGKELLCTVLKSWR*GVRHRRQANTALDK 529
           FDSGK+LLCTVLK+         + NTALDK
Sbjct: 129 FDSGKDLLCTVLKACGEECVIAIKTNTALDK 159



 Score =  126 bits (304), Expect = 3e-29
 Identities = 58/76 (76%), Positives = 65/76 (85%)
 Frame = +3

Query: 51  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 230
           M +++D HFET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-HFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 231 VGIDIFNGKSMKISVP 278
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3794|AAM68297.1|  159|Drosophila melanogaster CG3186-PB,
           isoform B protein.
          Length = 159

 Score =  135 bits (327), Expect = 5e-32
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 257 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 436
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 437 FDSGKELLCTVLKSWR*GVRHRRQANTALDK 529
           FDSGK+LLCTVLK+         + NTALDK
Sbjct: 129 FDSGKDLLCTVLKACGEECVIAIKTNTALDK 159



 Score =  123 bits (296), Expect = 3e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +3

Query: 51  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 230
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 231 VGIDIFNGKSMKISVP 278
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AE013599-3793|AAF47151.1|  159|Drosophila melanogaster CG3186-PA,
           isoform A protein.
          Length = 159

 Score =  135 bits (327), Expect = 5e-32
 Identities = 64/91 (70%), Positives = 74/91 (81%)
 Frame = +2

Query: 257 KYEDICPSTHNMDVPHVKREDYQLTDISDDGYLTLMADNGDLREDLKIPDGDLGTQLRTD 436
           KYEDICPSTHNMDVP+VKRED QL  ISDD +LTLM ++GDLREDLK+P+G+LG QLR D
Sbjct: 69  KYEDICPSTHNMDVPNVKREDLQLIAISDDSFLTLMTESGDLREDLKVPEGELGEQLRLD 128

Query: 437 FDSGKELLCTVLKSWR*GVRHRRQANTALDK 529
           FDSGK+LLCTVLK+         + NTALDK
Sbjct: 129 FDSGKDLLCTVLKACGEECVIAIKTNTALDK 159



 Score =  123 bits (296), Expect = 3e-28
 Identities = 57/76 (75%), Positives = 64/76 (84%)
 Frame = +3

Query: 51  MGDIEDTHFETGDSGASATFPMQCSALRKNGFVMLKGRPCKIVEMSTSKTGKHGHAKVHL 230
           M +++D  FET DSGAS T+PMQCSALRKNGFVMLK RPCKIVEMSTSKTGKHGHAKVH+
Sbjct: 1   MAELDD-QFETTDSGASTTYPMQCSALRKNGFVMLKSRPCKIVEMSTSKTGKHGHAKVHM 59

Query: 231 VGIDIFNGKSMKISVP 278
           VGIDIF+ K  +   P
Sbjct: 60  VGIDIFSNKKYEDICP 75


>AY121665-1|AAM51992.1|  709|Drosophila melanogaster RE10861p
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 202 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 50
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>AE014296-2303|AAF49800.1|  709|Drosophila melanogaster CG10710-PA
           protein.
          Length = 709

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
 Frame = -1

Query: 202 PVLDVDIST-ILHGRPFSITKPFLRRAEHCMGKVAEAPESPVSKCVSSMSPI 50
           P    D+S  +LH  P S T   L  + + +   A AP SP S+C SS SP+
Sbjct: 552 PAPSTDLSPELLHISPESPTSTLLLPSSNHL-VAAVAPHSPASQCSSSQSPM 602


>BT022730-1|AAY55146.1| 1019|Drosophila melanogaster RH43128p
           protein.
          Length = 1019

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 147 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 64
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>AE014134-2325|AAF53280.2| 1087|Drosophila melanogaster CG31729-PA,
           isoform A protein.
          Length = 1087

 Score = 29.1 bits (62), Expect = 6.8
 Identities = 13/28 (46%), Positives = 18/28 (64%)
 Frame = -2

Query: 147 RNRFYAGPNIAWGRWLRPRSLRSQSVCL 64
           RNR+Y      W +W RPR LR+++V L
Sbjct: 26  RNRWYLFS--CWRKWFRPRELRARTVNL 51


>BT023407-1|AAY55823.1|  475|Drosophila melanogaster IP10431p
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 269 YLHTFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWT 162
           YL+T  ++  + + ++F +  L G+GC     L W+
Sbjct: 253 YLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWS 288


>AE013599-1503|AAF58501.4|  475|Drosophila melanogaster CG12370-PA
           protein.
          Length = 475

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 10/36 (27%), Positives = 20/36 (55%)
 Frame = -3

Query: 269 YLHTFTIEDINPNQVNFSVAVLSGFGCGHFNNLAWT 162
           YL+T  ++  + + ++F +  L G+GC     L W+
Sbjct: 253 YLYTLVVQTFSSDNISFIIYALIGWGCPAVCILVWS 288


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,762,494
Number of Sequences: 53049
Number of extensions: 827141
Number of successful extensions: 2677
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2669
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3437745267
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)