Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00292
(726 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation in... 68 4e-11
BC002719-1|AAH02719.1| 258|Homo sapiens eukaryotic translation ... 68 4e-11
AK023388-1|BAB14555.1| 258|Homo sapiens protein ( Homo sapiens ... 67 7e-11
AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin rece... 32 1.8
BC014001-1|AAH14001.2| 445|Homo sapiens UBX domain containing 8... 31 3.2
BC006145-1|AAH06145.2| 445|Homo sapiens UBX domain containing 8... 31 3.2
BC001069-1|AAH01069.2| 445|Homo sapiens UBX domain containing 8... 31 3.2
AB088120-1|BAC22491.1| 445|Homo sapiens ETEA protein. 31 3.2
AB020694-1|BAA74910.1| 443|Homo sapiens KIAA0887 protein protein. 31 3.2
BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein. 30 9.7
AB040947-1|BAA96038.1| 1598|Homo sapiens KIAA1514 protein protein. 30 9.7
>U97670-1|AAC78729.1| 258|Homo sapiens eukaryotic translation
initiation factor eIF3, p35 subunit protein.
Length = 258
Score = 67.7 bits (158), Expect = 4e-11
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +2
Query: 545 MTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFADLLTKK 724
+TPE++LA+KLR +KLQEESDL LA ETFGV G +D +P++++++TEF LL K
Sbjct: 108 LTPEEQLADKLRLKKLQEESDLELAKETFGVNNAVYG-IDAMNPSSRDDFTEFGKLLKDK 166
Score = 30.7 bits (66), Expect = 5.6
Identities = 22/81 (27%), Positives = 33/81 (40%), Gaps = 6/81 (7%)
Frame = +3
Query: 285 SWDADNFEPKLPTT------LAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXX 446
SWDAD F + P A ++W GEDED++V
Sbjct: 13 SWDADAFSVEDPVRKVGGGGTAGGDRWGGEDEDEDV--KDNWDDDDDEKKEEAEVKPEVK 70
Query: 447 XXXXXXIHDKIAERERQEREK 509
I +KI E+ERQ++++
Sbjct: 71 ISEKKKIAEKIKEKERQQKKR 91
>BC002719-1|AAH02719.1| 258|Homo sapiens eukaryotic translation
initiation factor 3, subunit 1 alpha, 35kDa protein.
Length = 258
Score = 67.7 bits (158), Expect = 4e-11
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +2
Query: 545 MTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFADLLTKK 724
+TPE++LA+KLR +KLQEESDL LA ETFGV G +D +P++++++TEF LL K
Sbjct: 108 LTPEEQLADKLRLKKLQEESDLELAKETFGVNNAVYG-IDAMNPSSRDDFTEFGKLLKDK 166
Score = 33.5 bits (73), Expect = 0.79
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +3
Query: 285 SWDADNFEPKLPTT------LAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXX 446
SWDAD F + P A ++WEGEDED++V
Sbjct: 13 SWDADAFSVEDPVRKVGGGGTAGGDRWEGEDEDEDV--KDNWDDDDDEKKEEAEVKPEVK 70
Query: 447 XXXXXXIHDKIAERERQEREK 509
I +KI E+ERQ++++
Sbjct: 71 ISEKKKIAEKIKEKERQQKKR 91
>AK023388-1|BAB14555.1| 258|Homo sapiens protein ( Homo sapiens
cDNA FLJ13326 fis, clone OVARC1001766, highly similar to
Homo sapiens eukaryotic translation initiation factor
eIF3, p35 ).
Length = 258
Score = 66.9 bits (156), Expect = 7e-11
Identities = 32/60 (53%), Positives = 45/60 (75%)
Frame = +2
Query: 545 MTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFADLLTKK 724
+TPE++LA+KLR +KLQEESDL LA ETFGV G +D +P++++++TEF LL K
Sbjct: 108 LTPEEQLADKLRLKKLQEESDLELAKETFGVNNTVYG-IDAMNPSSRDDFTEFGKLLKDK 166
Score = 33.5 bits (73), Expect = 0.79
Identities = 23/81 (28%), Positives = 34/81 (41%), Gaps = 6/81 (7%)
Frame = +3
Query: 285 SWDADNFEPKLPTT------LAASNKWEGEDEDDNVXXXXXXXXXXXXXXXXXXAAXXXX 446
SWDAD F + P A ++WEGEDED++V
Sbjct: 13 SWDADAFSVEDPVRKVGGGGTAGGDRWEGEDEDEDV--KDNWDDDDDEKKEEAEVKPEVK 70
Query: 447 XXXXXXIHDKIAERERQEREK 509
I +KI E+ERQ++++
Sbjct: 71 ISEKKKIAEKIKEKERQQKKR 91
>AL008583-2|CAA15430.2| 488|Homo sapiens neuronal pentraxin
receptor protein.
Length = 488
Score = 32.3 bits (70), Expect = 1.8
Identities = 16/46 (34%), Positives = 26/46 (56%)
Frame = +2
Query: 539 EEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHP 676
EE+ Q AE+LRQ LQ+E+ +R +T G +G+ ++ P
Sbjct: 110 EELLLLQSTAEQLRQTALQQEARIRADQDTIRELTGKLGRCESGLP 155
>BC014001-1|AAH14001.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 527 EKTAEEMTPEQKLAEKLRQQKLQEESDLRL 616
++ EE +QKLAE+ R+Q LQEE + +L
Sbjct: 318 KRRKEEEVQQQKLAEERRRQNLQEEKERKL 347
>BC006145-1|AAH06145.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 527 EKTAEEMTPEQKLAEKLRQQKLQEESDLRL 616
++ EE +QKLAE+ R+Q LQEE + +L
Sbjct: 318 KRRKEEEVQQQKLAEERRRQNLQEEKERKL 347
>BC001069-1|AAH01069.2| 445|Homo sapiens UBX domain containing 8
protein.
Length = 445
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 527 EKTAEEMTPEQKLAEKLRQQKLQEESDLRL 616
++ EE +QKLAE+ R+Q LQEE + +L
Sbjct: 318 KRRKEEEVQQQKLAEERRRQNLQEEKERKL 347
>AB088120-1|BAC22491.1| 445|Homo sapiens ETEA protein.
Length = 445
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 527 EKTAEEMTPEQKLAEKLRQQKLQEESDLRL 616
++ EE +QKLAE+ R+Q LQEE + +L
Sbjct: 318 KRRKEEEVQQQKLAEERRRQNLQEEKERKL 347
>AB020694-1|BAA74910.1| 443|Homo sapiens KIAA0887 protein protein.
Length = 443
Score = 31.5 bits (68), Expect = 3.2
Identities = 14/30 (46%), Positives = 21/30 (70%)
Frame = +2
Query: 527 EKTAEEMTPEQKLAEKLRQQKLQEESDLRL 616
++ EE +QKLAE+ R+Q LQEE + +L
Sbjct: 316 KRRKEEEVQQQKLAEERRRQNLQEEKERKL 345
>BC066363-1|AAH66363.1| 1805|Homo sapiens SDK2 protein protein.
Length = 1805
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 696 VYSSFVVGWKLSSLPMLPSVTPKVSMASRKSDSSCSFCWRSFSANFCSGV 547
VYSS V W L +P +P P A + ++ F W + S F +G+
Sbjct: 410 VYSSKVTEWTLQGVPTVP---PGNVHAEATNSTTIRFTWNAPSPQFINGI 456
>AB040947-1|BAA96038.1| 1598|Homo sapiens KIAA1514 protein protein.
Length = 1598
Score = 29.9 bits (64), Expect = 9.7
Identities = 16/50 (32%), Positives = 24/50 (48%)
Frame = -1
Query: 696 VYSSFVVGWKLSSLPMLPSVTPKVSMASRKSDSSCSFCWRSFSANFCSGV 547
VYSS V W L +P +P P A + ++ F W + S F +G+
Sbjct: 454 VYSSKVTEWTLQGVPTVP---PGNVHAEATNSTTIRFTWNAPSPQFINGI 500
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 88,418,738
Number of Sequences: 237096
Number of extensions: 1634287
Number of successful extensions: 4519
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4517
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8567175942
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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