Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00292
         (726 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p pro...    67   2e-11
AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA...    67   2e-11
AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p pro...    32   0.91 
AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-P...    32   0.91 

>AY051457-1|AAK92881.1|  236|Drosophila melanogaster GH12681p
           protein.
          Length = 236

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 530 KTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFAD 709
           K    ++P +KLAEKLR QK+QE SDL+ A E FGVT    G LD F+P TKEE+ EF  
Sbjct: 83  KRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNPETKEEFKEFGA 141

Query: 710 LLTKK 724
            L+ K
Sbjct: 142 TLSWK 146



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 318 PTTLAASNKWEGEDEDDNV 374
           PT  A+ NKWEGEDED+++
Sbjct: 17  PTAAASVNKWEGEDEDEDI 35


>AE013599-980|AAF58867.1|  236|Drosophila melanogaster CG12131-PA
           protein.
          Length = 236

 Score = 67.3 bits (157), Expect = 2e-11
 Identities = 35/65 (53%), Positives = 43/65 (66%)
 Frame = +2

Query: 530 KTAEEMTPEQKLAEKLRQQKLQEESDLRLAMETFGVTEGNIGKLDNFHPTTKEEYTEFAD 709
           K    ++P +KLAEKLR QK+QE SDL+ A E FGVT    G LD F+P TKEE+ EF  
Sbjct: 83  KRLANLSPAEKLAEKLRLQKIQEASDLKHAQEAFGVT-STCGGLDAFNPETKEEFKEFGA 141

Query: 710 LLTKK 724
            L+ K
Sbjct: 142 TLSWK 146



 Score = 34.3 bits (75), Expect = 0.17
 Identities = 12/19 (63%), Positives = 16/19 (84%)
 Frame = +3

Query: 318 PTTLAASNKWEGEDEDDNV 374
           PT  A+ NKWEGEDED+++
Sbjct: 17  PTAAASVNKWEGEDEDEDI 35


>AY051941-1|AAK93365.1|  565|Drosophila melanogaster LD41932p
           protein.
          Length = 565

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +2

Query: 518 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 628
           L+ +K  EE   E+KL EK RQ+KL+E E + +L  ET
Sbjct: 42  LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 79


>AE014298-1695|AAF48098.2| 1168|Drosophila melanogaster CG32662-PA
           protein.
          Length = 1168

 Score = 31.9 bits (69), Expect = 0.91
 Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
 Frame = +2

Query: 518 LVTEKTAEEMTPEQKLAEKLRQQKLQE-ESDLRLAMET 628
           L+ +K  EE   E+KL EK RQ+KL+E E + +L  ET
Sbjct: 645 LLKKKEKEEKEREEKLKEKERQEKLKEKEREEKLKRET 682


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,746,979
Number of Sequences: 53049
Number of extensions: 510762
Number of successful extensions: 2094
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2092
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3252477558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)