Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00291
(630 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9 prot... 140 4e-33
BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein. 140 4e-33
BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9 pr... 140 4e-33
AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA seq... 138 1e-32
AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9 pr... 126 6e-29
BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.16
BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleola... 36 0.16
AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein. 36 0.16
AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3 hom... 36 0.16
AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens ... 36 0.16
AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subf... 32 1.9
AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette tr... 32 1.9
AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette tr... 32 1.9
AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein. 32 1.9
AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein. 30 5.9
AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein. 30 5.9
BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43 ... 30 7.8
AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens ... 30 7.8
AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein. 30 7.8
>U14971-1|AAA85659.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 43.2 bits (97), Expect = 8e-04
Identities = 18/23 (78%), Positives = 20/23 (86%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP G GRPGRVKRKN +KGQGG
Sbjct: 162 RSPTGVGRPGRVKRKNAKKGQGG 184
>BC141920-1|AAI41921.1| 113|Homo sapiens RPS9 protein protein.
Length = 113
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 27 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 86
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 87 IVRLDSQKHIDFS 99
>BC096756-1|AAH96756.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC071940-1|AAH71940.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC068055-1|AAH68055.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC007857-1|AAH07857.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC007434-1|AAH07434.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC007410-1|AAH07410.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>BC000802-1|AAH00802.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>AB061839-1|BAB79477.1| 194|Homo sapiens ribosomal protein S9
protein.
Length = 194
Score = 140 bits (339), Expect = 4e-33
Identities = 67/73 (91%), Positives = 70/73 (95%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRHIRVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHIRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 133 bits (321), Expect = 6e-31
Identities = 61/69 (88%), Positives = 67/69 (97%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKD
Sbjct: 8 VCRKTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.8 bits (111), Expect = 2e-05
Identities = 19/23 (82%), Positives = 22/23 (95%)
Frame = +3
Query: 510 KSPFGGGRPGRVKRKNLRKGQGG 578
+SP+GGGRPGRVKRKN +KGQGG
Sbjct: 162 RSPYGGGRPGRVKRKNAKKGQGG 184
>AL080243-1|CAB62915.1| 194|Homo sapiens protein ( Human DNA
sequence from clone RP11-12M9 on chromosome 22. ).
Length = 194
Score = 138 bits (335), Expect = 1e-32
Identities = 66/73 (90%), Positives = 69/73 (94%)
Frame = +1
Query: 289 DEKQMKLDYVLGLKIEDFLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSF 468
DE +MKLDY+LGLKIEDFLERRLQTQVFK GLAKSIHHAR+LIRQRH RVRKQVVNIPSF
Sbjct: 88 DEGKMKLDYILGLKIEDFLERRLQTQVFKLGLAKSIHHARVLIRQRHFRVRKQVVNIPSF 147
Query: 469 IVRLDSGKHIDFS 507
IVRLDS KHIDFS
Sbjct: 148 IVRLDSQKHIDFS 160
Score = 125 bits (302), Expect = 1e-28
Identities = 58/69 (84%), Positives = 65/69 (94%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKD 229
V KTYVTPRR FEK+RLDQELK+I EYGLRNKREVWRVK+TLA+IRKAARELLTL++KD
Sbjct: 8 VCRKTYVTPRRSFEKSRLDQELKLIEEYGLRNKREVWRVKFTLAKIRKAARELLTLDQKD 67
Query: 230 PKRLFEGNA 256
P+RLFEGNA
Sbjct: 68 PRRLFEGNA 76
Score = 48.0 bits (109), Expect = 3e-05
Identities = 19/22 (86%), Positives = 21/22 (95%)
Frame = +3
Query: 513 SPFGGGRPGRVKRKNLRKGQGG 578
SP+GGGRPGRVKRKN +KGQGG
Sbjct: 163 SPYGGGRPGRVKRKNAKKGQGG 184
>AB007150-1|BAA25816.1| 64|Homo sapiens ribosomal protein S9
protein.
Length = 64
Score = 126 bits (304), Expect = 6e-29
Identities = 57/63 (90%), Positives = 63/63 (100%)
Frame = +2
Query: 59 KTYVTPRRPFEKARLDQELKIIGEYGLRNKREVWRVKYTLARIRKAARELLTLEEKDPKR 238
KTYVTPRRPFEK+RLDQELK+IGEYGLRNKREVWRVK+TLA+IRKAARELLTL+EKDP+R
Sbjct: 2 KTYVTPRRPFEKSRLDQELKLIGEYGLRNKREVWRVKFTLAKIRKAARELLTLDEKDPRR 61
Query: 239 LFE 247
LFE
Sbjct: 62 LFE 64
>BC011745-1|AAH11745.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 474
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>BC006487-1|AAH06487.1| 184|Homo sapiens IMP3, U3 small nucleolar
ribonucleoprotein, homolog (yeast) protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 474
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AY050497-1|AAL06639.1| 184|Homo sapiens BRMS2 protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 474
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK223121-1|BAD96841.1| 184|Homo sapiens U3 snoRNP protein 3
homolog protein.
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 474
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AK001830-1|BAA91929.1| 184|Homo sapiens protein ( Homo sapiens
cDNA FLJ10968 fis, clone PLACE1000863, moderately
similar to PUTATIVE MITOCHONDRIAL 40S RIBOSOMAL PROTEIN
YHR148W. ).
Length = 184
Score = 35.5 bits (78), Expect = 0.16
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +1
Query: 340 FLERRLQTQVFKAGLAKSIHHARILIRQRHIRVRKQVVNIPSFIV 474
F RRL T + K +A+ + A + Q H+RV VV P+F+V
Sbjct: 106 FCRRRLPTVLLKLRMAQHLQAAVAFVEQGHVRVGPDVVTDPAFLV 150
>AY219711-1|AAP21093.1| 2595|Homo sapiens ABCA12 transporter subfamily
A protein.
Length = 2595
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 248 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 90
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 89 QKDDEVSRTSLKIPTVL 39
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AY033486-1|AAK54355.1| 2277|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2277
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 248 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 90
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 680 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 738
Query: 89 QKDDEVSRTSLKIPTVL 39
KD+ ++ S +P VL
Sbjct: 739 MKDNFLTSVSYSLPIVL 755
>AF418105-1|AAN40735.1| 2347|Homo sapiens ATP-binding cassette
transporter family A member 12 protein.
Length = 2347
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 248 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 90
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 750 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 808
Query: 89 QKDDEVSRTSLKIPTVL 39
KD+ ++ S +P VL
Sbjct: 809 MKDNFLTSVSYSLPIVL 825
>AC072062-1|AAY24276.1| 2413|Homo sapiens unknown protein.
Length = 2413
Score = 31.9 bits (69), Expect = 1.9
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 7/77 (9%)
Frame = -2
Query: 248 LRTISWGPSPRG*GAHEQPYG----YERACI*RAILHACCGDRTLR*SSTLGQDVP---F 90
LRT W P P +H Q YG Y + I RAI+ G R + + Q +P F
Sbjct: 998 LRTKIWAPGPHNSPSHNQIYGRAFIYLQDSIERAIIELQTG-RNSQEIAVQVQAIPYPCF 1056
Query: 89 QKDDEVSRTSLKIPTVL 39
KD+ ++ S +P VL
Sbjct: 1057 MKDNFLTSVSYSLPIVL 1073
>AF495911-1|AAN60443.1| 6884|Homo sapiens nesprin-2 protein.
Length = 6884
Score = 30.3 bits (65), Expect = 5.9
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEK-ARLDQELKIIGEYGLRNKREV-WRVKYTLARIRKAARELLTLEE 223
+F + R FE A+L+ LK EYG + E+ + R + R+L +EE
Sbjct: 1977 LFCQALARKREQFESVAQLNNSLK---EYGFTEEEEIIMEATCLMDRYQTLLRQLSEIEE 2033
Query: 224 KDPKRLFEGNAFYVVWFVLEYWMKNR*NSIMCL 322
+D E +F + + +W+K S+M L
Sbjct: 2034 EDKLLPTEDQSFNDLAHDVIHWIKEIKESLMVL 2066
>AF435011-1|AAL33548.1| 6885|Homo sapiens NUANCE protein.
Length = 6885
Score = 30.3 bits (65), Expect = 5.9
Identities = 25/93 (26%), Positives = 42/93 (45%), Gaps = 2/93 (2%)
Frame = +2
Query: 50 VFSKTYVTPRRPFEK-ARLDQELKIIGEYGLRNKREV-WRVKYTLARIRKAARELLTLEE 223
+F + R FE A+L+ LK EYG + E+ + R + R+L +EE
Sbjct: 1978 LFCQALARKREQFESVAQLNNSLK---EYGFTEEEEIIMEATCLMDRYQTLLRQLSEIEE 2034
Query: 224 KDPKRLFEGNAFYVVWFVLEYWMKNR*NSIMCL 322
+D E +F + + +W+K S+M L
Sbjct: 2035 EDKLLPTEDQSFNDLAHDVIHWIKEIKESLMVL 2067
>BC109028-1|AAI09029.1| 783|Homo sapiens ring finger protein 43
protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 345 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 485
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AK000322-1|BAA91085.1| 783|Homo sapiens protein ( Homo sapiens
cDNA FLJ20315 fis, clone HEP07873. ).
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 345 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 485
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
>AB081837-1|BAD51435.1| 783|Homo sapiens urcc protein.
Length = 783
Score = 29.9 bits (64), Expect = 7.8
Identities = 18/50 (36%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
Frame = +3
Query: 345 GASSADAGVQSWPGEVHPSCQ---NFDPAKAYSCPQASCEHPIIYCAPGL 485
G S G + VHP+CQ ++ P+ AY P + HP+I PGL
Sbjct: 659 GPSEPTPGSRPQDATVHPACQIFPHYTPSVAY--PWSPEAHPLICGPPGL 706
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,819,089
Number of Sequences: 237096
Number of extensions: 2040469
Number of successful extensions: 5218
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4935
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5218
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6860268620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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