Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00290
         (735 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI0000DB7854 Cluster: PREDICTED: similar to pickpocket...    33   7.3  

>UniRef50_UPI0000DB7854 Cluster: PREDICTED: similar to pickpocket 28
           CG4805-PA, isoform A, partial; n=1; Apis mellifera|Rep:
           PREDICTED: similar to pickpocket 28 CG4805-PA, isoform
           A, partial - Apis mellifera
          Length = 593

 Score = 33.1 bits (72), Expect = 7.3
 Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 1/110 (0%)
 Frame = -1

Query: 735 NTLAIHVLERYRKGYPKCSHLFKIAEYSSDDRTKRTVRIFRKYNTNTS-DTHAISISNSY 559
           N ++I +   Y K   +     K  E       K T+   R +N N     + + + N Y
Sbjct: 11  NAMSIKIYRDYLKS--ENEDKIKSIETIYKTTDKATLNYLRNHNPNIPYSINTVHLQNPY 68

Query: 558 KLKRVFV*HQLYHNQATWPTCFKLIHRIKDSGLEAIKSNIEFKMLLAPIT 409
           K       +    N    PT FK+++R KD+ L +  +   F    +PIT
Sbjct: 69  KQPFRLEGYATEENFKVRPTSFKIMYRSKDTTLRSRYNKNAFSRKESPIT 118


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 615,906,669
Number of Sequences: 1657284
Number of extensions: 10914366
Number of successful extensions: 22940
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 22277
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 22938
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 59677054775
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)