Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= wdS00290
         (735 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory recept...    22   4.5  
AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory recept...    22   5.9  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.8  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    21   7.8  

>AM292378-1|CAL23190.2|  387|Tribolium castaneum gustatory receptor
           candidate 57 protein.
          Length = 387

 Score = 22.2 bits (45), Expect = 4.5
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -1

Query: 357 LRIIIYFHDYKVNLDCVFFIYG 292
           L III    Y +NL  +F +YG
Sbjct: 245 LEIIIVVITYVLNLTDLFLVYG 266


>AM292369-1|CAL23181.1|  408|Tribolium castaneum gustatory receptor
           candidate 48 protein.
          Length = 408

 Score = 21.8 bits (44), Expect = 5.9
 Identities = 10/42 (23%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
 Frame = +3

Query: 18  FCFFLYV*TIAYKMFETCFLINILIFSEAM-KIVRLVIACVF 140
           FC+F+Y+ T+ Y ++ +    +I+ F   + K +     C++
Sbjct: 147 FCYFIYLFTV-YYIYYSVHEASIINFGYTLAKFMIFTSTCIY 187


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 425 CWHRSLLANHQNIISNYIKLIEVL 354
           C+   LLANH+ +    +K +E +
Sbjct: 308 CYTLMLLANHREVQEEILKEMEAV 331


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 21.4 bits (43), Expect = 7.8
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = -2

Query: 425 CWHRSLLANHQNIISNYIKLIEVL 354
           C+   LLANH+ +    +K +E +
Sbjct: 308 CYTLMLLANHREVQEEILKEMEAV 331


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,131
Number of Sequences: 336
Number of extensions: 3214
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19675845
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)