Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00289
(636 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141; Eukar... 165 1e-39
UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53; Eukary... 143 3e-33
UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|R... 132 7e-30
UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|R... 119 7e-26
UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=... 114 2e-24
UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|R... 106 5e-22
UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal ... 103 5e-21
UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:... 95 1e-18
UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillar... 94 2e-18
UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6; Archae... 90 5e-17
UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1; Encepha... 86 8e-16
UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia lam... 78 2e-13
UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 73 8e-12
UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, wh... 72 1e-11
UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep... 72 1e-11
UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5; Archaea|... 69 1e-10
UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal ... 67 4e-10
UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;... 66 5e-10
UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12; Eurya... 64 2e-09
UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environment... 57 3e-07
UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n... 57 4e-07
UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lambli... 48 1e-04
UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeu... 48 2e-04
UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2; Desulf... 47 3e-04
UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis... 46 0.001
UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4; Sulfol... 45 0.001
UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyosteli... 45 0.002
UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4; Pyrobaculum... 45 0.002
UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG0012... 44 0.003
UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep: ... 44 0.003
UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiell... 43 0.007
UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep: ... 38 0.15
UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2; ... 38 0.27
UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus... 38 0.27
UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3; ... 37 0.35
UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1; ... 35 1.4
UniRef50_Q7YZ09 Cluster: Transcription factor, possible; n=3; Cr... 35 1.9
UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia MC0... 33 4.4
UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed; ... 33 4.4
UniRef50_UPI000051A765 Cluster: PREDICTED: similar to myosin IE;... 33 5.8
UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein precur... 33 5.8
UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome s... 33 7.6
UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31; Gam... 33 7.6
UniRef50_A4RT88 Cluster: Predicted protein; n=1; Ostreococcus lu... 33 7.6
UniRef50_Q8IE44 Cluster: Putative uncharacterized protein MAL13P... 33 7.6
>UniRef50_P36241 Cluster: 60S ribosomal protein L19; n=141;
Eukaryota|Rep: 60S ribosomal protein L19 - Drosophila
melanogaster (Fruit fly)
Length = 203
Score = 165 bits (400), Expect = 1e-39
Identities = 76/82 (92%), Positives = 80/82 (97%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MSSLKLQKRLAASV+RCGKKKVWLDPNEINEIANTNSRQNIRK+IKDGL+IKKPV VHSR
Sbjct: 1 MSSLKLQKRLAASVLRCGKKKVWLDPNEINEIANTNSRQNIRKLIKDGLIIKKPVVVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
RVRKNTEARRKGRHCGFGKR+
Sbjct: 61 YRVRKNTEARRKGRHCGFGKRK 82
Score = 123 bits (297), Expect = 3e-27
Identities = 59/86 (68%), Positives = 64/86 (74%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
+GTANARMP K LW +KKIDRHLYH LYMK KGNVFKNKRVLMEY
Sbjct: 82 KGTANARMPTKLLWMQRQRVLRRLLKKYRDSKKIDRHLYHDLYMKCKGNVFKNKRVLMEY 141
Query: 434 IHRKKAEKARTKMLSDQAEARRNKVR 511
IH+KKAEK R+KML+DQAEARR KVR
Sbjct: 142 IHKKKAEKQRSKMLADQAEARRQKVR 167
>UniRef50_P84098 Cluster: 60S ribosomal protein L19; n=53;
Eukaryota|Rep: 60S ribosomal protein L19 - Homo sapiens
(Human)
Length = 196
Score = 143 bits (347), Expect = 3e-33
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 6e-25
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>UniRef50_Q95L19 Cluster: Ribosomal protein L19; n=4; Eukaryota|Rep:
Ribosomal protein L19 - Sus scrofa (Pig)
Length = 153
Score = 132 bits (319), Expect = 7e-30
Identities = 60/74 (81%), Positives = 66/74 (89%)
Frame = +3
Query: 36 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTE 215
RLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT
Sbjct: 1 RLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTL 60
Query: 216 ARRKGRHCGFGKRE 257
ARRKGRH G GKR+
Sbjct: 61 ARRKGRHMGIGKRK 74
Score = 108 bits (260), Expect = 1e-22
Identities = 50/90 (55%), Positives = 63/90 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 64 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 123
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEA 493
FKNKR+LME+IH+ KA+KAR K+L+DQAEA
Sbjct: 124 FKNKRILMEHIHKLKADKARKKLLADQAEA 153
>UniRef50_Q5DEB4 Cluster: Ribosomal protein L19; n=6; Eukaryota|Rep:
Ribosomal protein L19 - Schistosoma japonicum (Blood
fluke)
Length = 287
Score = 119 bits (286), Expect = 7e-26
Identities = 54/82 (65%), Positives = 65/82 (79%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS+L+ QKRLA++V CGKKK+WLDPNE I N NSR+ IRK+ KD L+I+KPV VHSR
Sbjct: 1 MSNLRTQKRLASAVFGCGKKKIWLDPNETTTIQNANSRKMIRKLYKDNLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
+R RKN ARRKGRH G GKR+
Sbjct: 61 SRCRKNLIARRKGRHTGTGKRK 82
Score = 103 bits (246), Expect = 5e-21
Identities = 50/101 (49%), Positives = 64/101 (63%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
+GTA+ARMPQK LW A KID+HLYH LY + KGN FKNKRVL+++
Sbjct: 82 KGTADARMPQKVLWMRRMRVLRRLLKRYREAHKIDKHLYHLLYQQCKGNQFKNKRVLIDH 141
Query: 434 IHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRR 556
IH+KKAE+ R K LSDQAEA R + R ++ L R++
Sbjct: 142 IHKKKAERLRAKQLSDQAEAMRQRKRESRVNRQHRLEERKK 182
>UniRef50_Q4QJ39 Cluster: 60S ribosomal protein L19, putative; n=16;
cellular organisms|Rep: 60S ribosomal protein L19,
putative - Leishmania major
Length = 267
Score = 114 bits (274), Expect = 2e-24
Identities = 52/82 (63%), Positives = 65/82 (79%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
M SLKLQ RLA+S++ CG+ +VWLDPNE EI N NSR+++RK+IKDG +I+KPV VHSR
Sbjct: 21 MVSLKLQARLASSILGCGRARVWLDPNEAVEIQNANSRKSVRKLIKDGFIIRKPVKVHSR 80
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RK EA+ GRH G G+RE
Sbjct: 81 ARWRKMKEAKDMGRHNGVGRRE 102
Score = 84.6 bits (200), Expect = 2e-15
Identities = 40/92 (43%), Positives = 56/92 (60%)
Frame = +2
Query: 257 GTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYI 436
G+ ARMP KELW KKIDRH+Y LYM+AKGNVF+NKR L+E+I
Sbjct: 103 GSREARMPSKELWMRRLRILRRLLRKYRADKKIDRHVYRDLYMRAKGNVFRNKRNLVEHI 162
Query: 437 HRKKAEKARTKMLSDQAEARRNKVRRHASAAR 532
H+ K EK + + L++Q A+ + ++ + AR
Sbjct: 163 HKIKNEKKKERQLAEQLAAKHLRDEQNRNKAR 194
>UniRef50_Q014R4 Cluster: Ribosomal protein L19; n=2; Eukaryota|Rep:
Ribosomal protein L19 - Ostreococcus tauri
Length = 213
Score = 106 bits (254), Expect = 5e-22
Identities = 54/95 (56%), Positives = 61/95 (64%), Gaps = 2/95 (2%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
RGT AR+P K LW AKKID+H+YHS+Y+K KGNVFKNKRVLME
Sbjct: 102 RGTREARLPTKVLWLRRHRVLRRLLSKYRDAKKIDKHMYHSMYLKCKGNVFKNKRVLMEA 161
Query: 434 IHRKKAEKARTKMLSDQAEARR--NKVRRHASAAR 532
IH+ KAEKAR K L+DQ EARR NK R AR
Sbjct: 162 IHKSKAEKAREKSLADQFEARRAKNKAVRERKIAR 196
Score = 64.5 bits (150), Expect = 2e-09
Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 20/101 (19%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPV----- 176
M SLKLQKRLAAS++ CG +K+W+DPNE+ T+ + R ++G
Sbjct: 1 MVSLKLQKRLAASILNCGVRKIWMDPNEVRHAWLTSGKTTERPQAREGRTGDPKTYEGTF 60
Query: 177 ---------------AVHSRARVRKNTEARRKGRHCGFGKR 254
+HSRAR + A+R GRH G+GKR
Sbjct: 61 PTLRGFHAARAYFNFQIHSRARTAREQAAKRLGRHTGYGKR 101
>UniRef50_UPI0000DA4672 Cluster: PREDICTED: similar to ribosomal
protein L19; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein L19 - Rattus norvegicus
Length = 303
Score = 103 bits (246), Expect = 5e-21
Identities = 53/80 (66%), Positives = 60/80 (75%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L LQKRLA+SV+ CGKKKV LDPNE N+IAN NS Q IRK+I+DGL+I KPV VHS+
Sbjct: 1 MSMLSLQKRLASSVLHCGKKKVQLDPNETNKIANANSCQLIRKLIEDGLIIWKPVTVHSQ 60
Query: 192 ARVRKNTEARRKGRHCGFGK 251
A KNT KGRH GK
Sbjct: 61 AHCEKNT---LKGRHMVIGK 77
Score = 81.4 bits (192), Expect = 2e-14
Identities = 42/123 (34%), Positives = 67/123 (54%)
Frame = +2
Query: 212 RST*KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKA 391
++T KG + + +GTAN +P++ W +KKID H+ HSLY++
Sbjct: 65 KNTLKGRHMVIGKGKGTANIWVPERVTWMRRMSILHRLLRRYCESKKIDCHMCHSLYLRV 124
Query: 392 KGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRP 571
K NVFKN+ +LME IH+ KA+KA K+L+DQ + + +K + +P R+ P
Sbjct: 125 KRNVFKNQWILMEQIHKPKADKACKKLLADQGDVQSSKSKDAQKLREEQVPTRQHKFQFP 184
Query: 572 SLE 580
L+
Sbjct: 185 FLK 187
>UniRef50_Q6QI82 Cluster: LRRGT00126; n=3; Rattus norvegicus|Rep:
LRRGT00126 - Rattus norvegicus (Rat)
Length = 632
Score = 95.1 bits (226), Expect = 1e-18
Identities = 48/109 (44%), Positives = 66/109 (60%)
Frame = +2
Query: 188 PRSCPQKHRST*KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHL 367
P S +KH +G + E GTANARM +K W +KKIDR +
Sbjct: 515 PGSLREKHLGLMEGQAYGHREEEGTANARMSEKLTWMRRMRILHRLLRRYRESKKIDRRM 574
Query: 368 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRR 514
YHSL +K KGNVFKNK L+++IH+ KA++A K+L+DQ EARR+K ++
Sbjct: 575 YHSLDLKVKGNVFKNKWSLVDHIHKLKADRAPKKLLADQTEARRSKTKK 623
>UniRef50_Q98RT9 Cluster: 60S ribosomal protein L19; n=1; Guillardia
theta|Rep: 60S ribosomal protein L19 - Guillardia theta
(Cryptomonas phi)
Length = 190
Score = 94.3 bits (224), Expect = 2e-18
Identities = 40/82 (48%), Positives = 58/82 (70%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MSS+K+ K +A+ ++ CGK+K+W+DPNE I T+SR +IRK+I+DG ++KK HSR
Sbjct: 1 MSSVKMHKTIASKLLNCGKRKIWIDPNETKNILFTDSRNSIRKLIRDGFILKKKDKNHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
R+R E + GRH G GKR+
Sbjct: 61 NRIRSRKEEIKLGRHEGLGKRK 82
Score = 70.9 bits (166), Expect = 2e-11
Identities = 32/84 (38%), Positives = 49/84 (58%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
+G+ N+R K +W + K++RHLY SLY+K+KGNVFKNK++L E+
Sbjct: 82 KGSKNSRYSIKLIWIIRIRVMRNLLKRLRNSSKLNRHLYRSLYLKSKGNVFKNKKILTEF 141
Query: 434 IHRKKAEKARTKMLSDQAEARRNK 505
IH+ K E+ R + D+ + R K
Sbjct: 142 IHKAKNEQKRKEEFLDKFKLMREK 165
>UniRef50_Q9V1V3 Cluster: 50S ribosomal protein L19e; n=6;
Archaea|Rep: 50S ribosomal protein L19e - Pyrococcus
abyssi
Length = 151
Score = 89.8 bits (213), Expect = 5e-17
Identities = 35/82 (42%), Positives = 62/82 (75%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
M +LK+Q+R+AA +++CG+ ++W+DP ++++A+ +R++IR++IK+G++ KKPV SR
Sbjct: 1 MKTLKMQRRVAAELLKCGENRIWIDPERVDDVASAITREDIRRLIKEGVIKKKPVKGQSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
R R E ++KGRH G G R+
Sbjct: 61 YRARIRHEQKKKGRHRGPGSRK 82
Score = 48.4 bits (110), Expect = 1e-04
Identities = 28/86 (32%), Positives = 36/86 (41%)
Frame = +2
Query: 206 KHRST*KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 385
+H KG +G ARM +KELW KKIDR Y LY+
Sbjct: 66 RHEQKKKGRHRGPGSRKGKKTARMGKKELWIKTIRALRKELRKLKEQKKIDRRTYRMLYI 125
Query: 386 KAKGNVFKNKRVLMEYIHRKKAEKAR 463
+AKG FK+K L ++ K R
Sbjct: 126 RAKGGQFKSKHQLYMFLEEHNLLKKR 151
>UniRef50_Q8SRP5 Cluster: 60S RIBOSOMAL PROTEIN L19; n=1;
Encephalitozoon cuniculi|Rep: 60S RIBOSOMAL PROTEIN L19
- Encephalitozoon cuniculi
Length = 171
Score = 85.8 bits (203), Expect = 8e-16
Identities = 38/81 (46%), Positives = 56/81 (69%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS+ + +RLA+ ++ CGKKK+WLD NEI + ++R+ I+++IKD ++I K SR
Sbjct: 1 MSNEERVRRLASDILNCGKKKLWLDNNEIERLNGASTREQIKQLIKDNVIIMKQDKHTSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKR 254
R RK EA++KGRH G GKR
Sbjct: 61 GRCRKRLEAKKKGRHMGTGKR 81
Score = 56.4 bits (130), Expect = 5e-07
Identities = 30/99 (30%), Positives = 53/99 (53%)
Frame = +2
Query: 197 CPQKHRST*KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHS 376
C ++ + KG + GTANARMPQK++W +I + +
Sbjct: 63 CRKRLEAKKKGRHMGTGKRFGTANARMPQKKIWMKKIRAMRAMLKEMRANGEITKEDFRV 122
Query: 377 LYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEA 493
Y +AKG++FK++ + + I ++KA++ R K L++QA+A
Sbjct: 123 FYKQAKGHLFKHRFHMKDCIIKRKADEQRAKELAEQAKA 161
>UniRef50_Q7QT85 Cluster: Ribosomal protein L19; n=1; Giardia
lamblia ATCC 50803|Rep: Ribosomal protein L19 - Giardia
lamblia ATCC 50803
Length = 196
Score = 78.2 bits (184), Expect = 2e-13
Identities = 39/87 (44%), Positives = 49/87 (56%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
RGT ARMP K LW +KIDRHLY +LY KAKGN+FKNKRVL+E+
Sbjct: 82 RGTREARMPSKTLWIQRQRVLRRLLSRYRDDEKIDRHLYETLYAKAKGNMFKNKRVLLEH 141
Query: 434 IHRKKAEKARTKMLSDQAEARRNKVRR 514
I + E+ K ++ E RR K +
Sbjct: 142 IVGMQKEQELEKKKKEELEQRRKKAEQ 168
Score = 74.5 bits (175), Expect = 2e-12
Identities = 35/81 (43%), Positives = 52/81 (64%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
M++L+LQKRLAA V++CGK++V +P I +SR+ IR +I+ ++ K + SR
Sbjct: 1 MANLRLQKRLAADVLKCGKRRVRFNPAHEKYIEQASSREAIRSLIESKIIAKLDIKGSSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKR 254
R+R A+R GRH G GKR
Sbjct: 61 GRIRARHAAKRLGRHSGHGKR 81
>UniRef50_P54043 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Methanococcus jannaschii
Length = 151
Score = 72.5 bits (170), Expect = 8e-12
Identities = 31/78 (39%), Positives = 53/78 (67%)
Frame = +3
Query: 21 LKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARV 200
+ +Q+R+AA +++CG ++VW+DP +++ + S+ +IR +IK+G++ KK S ARV
Sbjct: 6 VSVQRRMAAEILKCGIERVWIDPTQLDRVKMAMSKDDIRALIKEGVIKKKQKKGISSARV 65
Query: 201 RKNTEARRKGRHCGFGKR 254
+K E R+KGR G G R
Sbjct: 66 KKLKEQRKKGRRRGPGSR 83
Score = 44.0 bits (99), Expect = 0.003
Identities = 23/68 (33%), Positives = 30/68 (44%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
RG A AR P KE W + KIDR +Y LY AKG F+++ L Y
Sbjct: 84 RGAAGARTPPKERWMATIRALRKTLKQLRDSGKIDRKVYRKLYRMAKGGAFRSRSHLFLY 143
Query: 434 IHRKKAEK 457
+ + K
Sbjct: 144 MREHELLK 151
>UniRef50_A7Q820 Cluster: Chromosome undetermined scaffold_62, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_62, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 430
Score = 72.1 bits (169), Expect = 1e-11
Identities = 27/57 (47%), Positives = 43/57 (75%)
Frame = +3
Query: 36 RLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRK 206
+ A +++CG+ KVW+DPNE+NEI+ N RQNI K++KD +I+KP +HS++ R+
Sbjct: 19 KYTAIILKCGRGKVWIDPNEVNEISMVNFRQNISKLVKDDFIIRKPTKIHSQSVHRR 75
>UniRef50_Q74N10 Cluster: Ribosomal protein L19; n=3; Archaea|Rep:
Ribosomal protein L19 - Nanoarchaeum equitans
Length = 147
Score = 72.1 bits (169), Expect = 1e-11
Identities = 30/76 (39%), Positives = 51/76 (67%)
Frame = +3
Query: 30 QKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKN 209
Q+R+AA +++ G +VW+DPN + E+A ++ +IR++IK G++ K P+ SR R R+
Sbjct: 6 QRRMAAEILKVGLDRVWIDPNHLKEVAEALTKDDIRELIKRGIIKKLPIEGQSRKRAREL 65
Query: 210 TEARRKGRHCGFGKRE 257
E ++KGR G G R+
Sbjct: 66 HEKKKKGRRRGPGSRK 81
Score = 37.9 bits (84), Expect = 0.20
Identities = 20/64 (31%), Positives = 27/64 (42%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFKNKRVLMEY 433
+G AR K W K ID Y LY K KGN+FK++ L+ Y
Sbjct: 81 KGKRTARADPKRQWINKVRAQRKLLKELKEKKIIDNKTYWDLYKKVKGNLFKSRSHLLLY 140
Query: 434 IHRK 445
+ +K
Sbjct: 141 LKQK 144
>UniRef50_Q18GG7 Cluster: Ribosomal protein L19.eR; n=5;
Archaea|Rep: Ribosomal protein L19.eR - Haloquadratum
walsbyi (strain DSM 16790)
Length = 153
Score = 68.5 bits (160), Expect = 1e-10
Identities = 30/82 (36%), Positives = 49/82 (59%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
M+ LK Q+R+AA V+ GK ++W DP+E EIA +R++IR+++ G++ + +S+
Sbjct: 1 MTDLKAQRRMAADVLSVGKSRIWFDPDEQGEIAEAITREDIRELVDQGIIRAEDAKSNSK 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
R R E R G G G R+
Sbjct: 61 GRARSRAEKRAYGHRKGPGSRK 82
>UniRef50_UPI00005A22A8 Cluster: PREDICTED: similar to ribosomal
protein L19; n=1; Canis lupus familiaris|Rep: PREDICTED:
similar to ribosomal protein L19 - Canis familiaris
Length = 169
Score = 66.9 bits (156), Expect = 4e-10
Identities = 36/100 (36%), Positives = 56/100 (56%), Gaps = 2/100 (2%)
Frame = +2
Query: 341 TAKKIDRHLYHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHA 520
+A K+ H+ HSLY KAKG VFKNK +L+E+ ++ KA+K K+L+ QAEARR+K
Sbjct: 58 SAPKVALHMCHSLYRKAKGYVFKNKWILVEHNYKLKADKVPQKLLAAQAEARRSKTEEAH 117
Query: 521 SAARNVLPPRRRNCCR--PSLEKTKPRLPLRSKHYVVNNK 634
L ++ K + +LPL + ++ +K
Sbjct: 118 KGCEERLQAKKEEIIETVQGGRKQEIKLPLFGREPIIEDK 157
>UniRef50_UPI0001552F33 Cluster: PREDICTED: hypothetical protein;
n=1; Mus musculus|Rep: PREDICTED: hypothetical protein -
Mus musculus
Length = 183
Score = 66.5 bits (155), Expect = 5e-10
Identities = 35/78 (44%), Positives = 48/78 (61%)
Frame = +3
Query: 24 KLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVR 203
+L R + +RCGK+KVWLDP+E +EI N +S Q IRK+ +DGL+I+K
Sbjct: 39 ELPMRFVSGFLRCGKRKVWLDPSETSEIDNASSCQQIRKLSEDGLIIQKSA--------- 89
Query: 204 KNTEARRKGRHCGFGKRE 257
T ARR+G H G KR+
Sbjct: 90 --TLARRRGWHMGIRKRK 105
Score = 66.1 bits (154), Expect = 7e-10
Identities = 32/55 (58%), Positives = 41/55 (74%), Gaps = 2/55 (3%)
Frame = +2
Query: 353 IDRHLYHSLYMKAKGNVFK--NKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
ID HLY SLY+K KGNV K +KR+ E+I + KA+ A+ K+LSDQAEARR K +
Sbjct: 108 IDYHLYRSLYLKVKGNVLKTIDKRIFKEHIRKLKADSAQQKLLSDQAEARRCKTK 162
>UniRef50_Q9HPB6 Cluster: 50S ribosomal protein L19e; n=12;
Euryarchaeota|Rep: 50S ribosomal protein L19e -
Halobacterium salinarium (Halobacterium halobium)
Length = 149
Score = 64.5 bits (150), Expect = 2e-09
Identities = 31/82 (37%), Positives = 48/82 (58%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L QKRLAA V+ G+ +VW DP+ +EIA+ +R++IR+++ DG + + +SR
Sbjct: 1 MSDLSAQKRLAADVLDVGENRVWFDPDAQSEIADAITREDIRELVADGTIDAEDTQGNSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
R R+ G G G R+
Sbjct: 61 GRARERDAKESYGHKKGAGSRK 82
>UniRef50_Q673R0 Cluster: Ribosomal protein L19; n=2; environmental
samples|Rep: Ribosomal protein L19 - uncultured marine
group II euryarchaeote DeepAnt-JyKC7
Length = 158
Score = 57.2 bits (132), Expect = 3e-07
Identities = 26/82 (31%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Frame = +3
Query: 30 QKRLAASVMR------CGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
QKRLAA + G +VW+DP +++++++ ++++R++I +G++ +P SR
Sbjct: 6 QKRLAAQIFSKREGRPVGVHRVWVDPQKLDDVSDAVQKEDVRRLIDEGVIKARPFVGTSR 65
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
+R RK + KGR G G R+
Sbjct: 66 SRARKAAAQKAKGRRSGQGSRK 87
>UniRef50_Q6L1A9 Cluster: Large subunit ribosomal protein L19E; n=4;
Thermoplasmatales|Rep: Large subunit ribosomal protein
L19E - Picrophilus torridus
Length = 158
Score = 56.8 bits (131), Expect = 4e-07
Identities = 26/72 (36%), Positives = 44/72 (61%)
Frame = +3
Query: 33 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 212
K++AA M+ G +VW+D N I+++ + SR+++RK+I ++ KK +S R++K
Sbjct: 7 KQIAADEMKVGVSRVWIDTNSIDQVLDATSREDVRKLIDLHIIQKKQKKGNSNYRLKKRI 66
Query: 213 EARRKGRHCGFG 248
E KGR G G
Sbjct: 67 EQLAKGRRRGEG 78
>UniRef50_Q7QT86 Cluster: GLP_72_19704_20255; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_72_19704_20255 - Giardia lamblia
ATCC 50803
Length = 183
Score = 48.4 bits (110), Expect = 1e-04
Identities = 32/85 (37%), Positives = 50/85 (58%)
Frame = -3
Query: 502 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQ 323
+AA L L+ L LL L DVL E+ L+LEH+TL L +E ++ +P++L +V +Q
Sbjct: 67 LAALLKLLLLLLLELLLLLHSNDVLQENALILEHVTLSLSIEGLIKVPIDLFVVTVPAQQ 126
Query: 322 FS*NPLSLYP*FLLWHTRIGCTSLL 248
+ + L+L P L HT + T+ L
Sbjct: 127 ATEDTLALNPESLRRHTSLPGTAAL 151
>UniRef50_A0RUF8 Cluster: Ribosomal protein L19E; n=1; Cenarchaeum
symbiosum|Rep: Ribosomal protein L19E - Cenarchaeum
symbiosum
Length = 150
Score = 47.6 bits (108), Expect = 2e-04
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Frame = +3
Query: 18 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 197
+L+ +KRLA+ V G +++ DP +++IA+ +R +IR +I + KPV+ SR R
Sbjct: 4 NLRTKKRLASRVTGAGIHRIYFDPTHLDDIADAITRNDIRSLITANTIKIKPVSGTSRGR 63
Query: 198 VR-KNTEARRKGRHCG 242
+ K + ++G G
Sbjct: 64 AQHKRRQKAKRGSKAG 79
>UniRef50_Q9YF93 Cluster: 50S ribosomal protein L19e; n=2;
Desulfurococcaceae|Rep: 50S ribosomal protein L19e -
Aeropyrum pernix
Length = 155
Score = 47.2 bits (107), Expect = 3e-04
Identities = 24/80 (30%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Frame = +3
Query: 24 KLQKRLAASVMRCGKKKVWL--DPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 197
+ Q+RLAA ++ G+ ++W+ DP EI ++ ++R +IK G++ P ++
Sbjct: 4 RFQRRLAAEILGVGESRIWISPDPELREEIEGAVTKADVRALIKRGVIKVLPEKGNAGHA 63
Query: 198 VRKNTEARRKGRHCGFGKRE 257
+ RRKGR G G+R+
Sbjct: 64 SKVRHLQRRKGRRRGMGRRK 83
Score = 39.9 bits (89), Expect = 0.050
Identities = 23/77 (29%), Positives = 31/77 (40%)
Frame = +2
Query: 206 KHRST*KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYM 385
+H KG + +G A AR+ KE W + IDR Y LYM
Sbjct: 67 RHLQRRKGRRRGMGRRKGVATARLDPKERWMHRIRKIRRYLRYLRDKQVIDRKTYRRLYM 126
Query: 386 KAKGNVFKNKRVLMEYI 436
AKG F++ L Y+
Sbjct: 127 LAKGGTFRDLASLKRYM 143
>UniRef50_Q680Q9 Cluster: Ribosomal protein L19; n=3; Arabidopsis
thaliana|Rep: Ribosomal protein L19 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 114
Score = 45.6 bits (103), Expect = 0.001
Identities = 20/38 (52%), Positives = 28/38 (73%), Gaps = 1/38 (2%)
Frame = +2
Query: 347 KKIDRHLY-HSLYMKAKGNVFKNKRVLMEYIHRKKAEK 457
KKID+ +Y H ++MK KG V+KNK VLME +H+ E+
Sbjct: 54 KKIDKLVYYHDMFMKVKGKVYKNKCVLMESMHKSSRER 91
>UniRef50_Q9UX89 Cluster: 50S ribosomal protein L19e; n=4;
Sulfolobaceae|Rep: 50S ribosomal protein L19e -
Sulfolobus solfataricus
Length = 151
Score = 45.2 bits (102), Expect = 0.001
Identities = 28/84 (33%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDG-LVIKKPVAVHS 188
M++LK QKRLAAS+ G ++ + + I ++ ++ +R IR +IKDG +++ K V + S
Sbjct: 1 MTNLKAQKRLAASIAGVGINRIKVVEDYIEDVQSSLTRDEIRNLIKDGKIIVLKKVGI-S 59
Query: 189 RARV---RKNTEARRKGRHCGFGK 251
R+ RK + +G+ G K
Sbjct: 60 GGRLKERRKKRSLKSEGKKSGSRK 83
Score = 36.3 bits (80), Expect = 0.62
Identities = 17/52 (32%), Positives = 22/52 (42%)
Frame = +2
Query: 254 RGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNVFK 409
+G AR K++W K IDRH Y LY+K KG +K
Sbjct: 83 KGKKGARANSKQMWVKRVRKIRAYLKWLRDHKVIDRHTYRELYLKTKGGNYK 134
>UniRef50_Q55DB5 Cluster: Ribosomal protein L19; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L19 -
Dictyostelium discoideum AX4
Length = 84
Score = 44.8 bits (101), Expect = 0.002
Identities = 18/44 (40%), Positives = 30/44 (68%)
Frame = +3
Query: 39 LAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKK 170
LA + G KKVWLDP ++++I+ +R+ IR++I GL+ +K
Sbjct: 8 LAIRYLGVGAKKVWLDPTQMDKISKVKTREGIRELIAQGLIKRK 51
>UniRef50_Q8ZVV8 Cluster: Ribosomal protein L19; n=4;
Pyrobaculum|Rep: Ribosomal protein L19 - Pyrobaculum
aerophilum
Length = 147
Score = 44.8 bits (101), Expect = 0.002
Identities = 22/75 (29%), Positives = 38/75 (50%)
Frame = +3
Query: 33 KRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNT 212
KRLAA ++ G ++ + P + ++ ++R +I GL+ +P SR R R
Sbjct: 5 KRLAADILGVGVSRIKISPEAAERLEEVVTKDDVRALIDQGLIWAEPERGVSRGRWRVRH 64
Query: 213 EARRKGRHCGFGKRE 257
++KGR G G R+
Sbjct: 65 IKKKKGRRRGHGSRK 79
>UniRef50_Q6QI84 Cluster: LRRG00124; n=5; Eukaryota|Rep: LRRG00124 -
Rattus norvegicus (Rat)
Length = 487
Score = 44.0 bits (99), Expect = 0.003
Identities = 34/94 (36%), Positives = 44/94 (46%)
Frame = -3
Query: 460 GLLSLLPVDVLHEHTLVLEHITLRLHVE*VV*MPVNLLGSSVLQEQFS*NPLSLYP*FLL 281
GL+ L VDVLHE+ L LE+I L ++ V+ M VNLL + + L
Sbjct: 65 GLVCLQFVDVLHENPLALEYIPFDLQIQGVIYMAVNLLRFQLSLRSRHRILILLIQVTFS 124
Query: 280 WHTRIGCTSLLPKPQ*RPFLRASVFLRTRARECT 179
+ L P PF R+ VF R RARE T
Sbjct: 125 GIQALAVPFLFPMLICLPFRRSKVFFRHRAREWT 158
>UniRef50_Q6QI83 Cluster: LRRG00125; n=1; Rattus norvegicus|Rep:
LRRG00125 - Rattus norvegicus (Rat)
Length = 123
Score = 44.0 bits (99), Expect = 0.003
Identities = 19/39 (48%), Positives = 26/39 (66%)
Frame = -2
Query: 173 RFLDDETILDHLTDVLSGVGVCDLIDFIWIQPHLLFTTS 57
R DD+ I D L D+L+GVG+ D + I +QP L FTT+
Sbjct: 5 RLPDDQPIFDQLPDLLTGVGIGDFVGLIGVQPDLRFTTA 43
>UniRef50_Q3LVV0 Cluster: Ribosomal protein L19; n=1; Bigelowiella
natans|Rep: Ribosomal protein L19 - Bigelowiella natans
(Pedinomonas minutissima) (Chlorarachnion sp.(strain
CCMP 621))
Length = 150
Score = 42.7 bits (96), Expect = 0.007
Identities = 20/80 (25%), Positives = 43/80 (53%)
Frame = +3
Query: 18 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 197
++K K A+ +++CG K+ ++P + + + N+R+ I + K ++IKK + S R
Sbjct: 2 TIKKLKNTASKLLKCGSNKIKINPIYYSFLKSENNRKKIIDLFKKRIIIKKTIKGVSSYR 61
Query: 198 VRKNTEARRKGRHCGFGKRE 257
+ ++ G G G+R+
Sbjct: 62 KKLRKAKKQSGLKRGIGRRK 81
>UniRef50_Q6QI77 Cluster: LRRG00131; n=1; Rattus norvegicus|Rep:
LRRG00131 - Rattus norvegicus (Rat)
Length = 180
Score = 38.3 bits (85), Expect = 0.15
Identities = 20/53 (37%), Positives = 31/53 (58%)
Frame = -2
Query: 257 LSLTKATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLI 99
L L A + L + VF+ S G+ ++ LDD+ I D ++D+L GVG+ D I
Sbjct: 111 LPLPYAHMPALPSSQGVFSVVSPGMDGHKILDDQRIFDQISDLLMGVGIGDFI 163
>UniRef50_Q9TZE1 Cluster: Putative uncharacterized protein; n=2;
Caenorhabditis|Rep: Putative uncharacterized protein -
Caenorhabditis elegans
Length = 659
Score = 37.5 bits (83), Expect = 0.27
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Frame = -2
Query: 323 IFLKPFVFVPIVPSVAYAHWLYLSLTKATVTT-LSTCFCVFADTSAGVYCYRFLDDETIL 147
IF++PF IV + W L A + ++T FC+FAD S + R DD+ +
Sbjct: 402 IFIEPFFVNMIVTDDTFTDWRNCFLAHAGLLLFVNTIFCLFADASPAKWT-RLQDDDVAI 460
Query: 146 DHLTDVLSGVGVCDLIDFI 90
+ + SG + D+I F+
Sbjct: 461 EEEKEEYSG-SIEDIIKFL 478
>UniRef50_A7DRM7 Cluster: Ribosomal protein L19e; n=1; Candidatus
Nitrosopumilus maritimus SCM1|Rep: Ribosomal protein
L19e - Candidatus Nitrosopumilus maritimus SCM1
Length = 151
Score = 37.5 bits (83), Expect = 0.27
Identities = 20/70 (28%), Positives = 35/70 (50%)
Frame = +3
Query: 18 SLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRAR 197
+LK +KRLA+ V G ++ D + + ++A+ +R+NIR +I + SR R
Sbjct: 4 NLKAKKRLASRVTGVGVHRIKFDADHLTDVADAITRENIRSLITANTIKIDSFTGTSRGR 63
Query: 198 VRKNTEARRK 227
+ R K
Sbjct: 64 AQTKKAQRNK 73
>UniRef50_A2YPT1 Cluster: Putative uncharacterized protein; n=3;
Oryza sativa|Rep: Putative uncharacterized protein -
Oryza sativa subsp. indica (Rice)
Length = 55
Score = 37.1 bits (82), Expect = 0.35
Identities = 20/41 (48%), Positives = 25/41 (60%)
Frame = +2
Query: 383 MKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNK 505
MK KGN+ NKR + +AEKAR + LSDQ EA+ K
Sbjct: 1 MKVKGNMLNNKRGPYGEYPQVQAEKARKRTLSDQFEAKLAK 41
>UniRef50_Q1VH29 Cluster: Putative uncharacterized protein; n=1;
Psychroflexus torquis ATCC 700755|Rep: Putative
uncharacterized protein - Psychroflexus torquis ATCC
700755
Length = 38
Score = 35.1 bits (77), Expect = 1.4
Identities = 11/28 (39%), Positives = 23/28 (82%)
Frame = +3
Query: 30 QKRLAASVMRCGKKKVWLDPNEINEIAN 113
QKR+AA ++ CG+ +VW++P ++++A+
Sbjct: 6 QKRIAARLLGCGENRVWINPLYVDQVAS 33
>UniRef50_Q7YZ09 Cluster: Transcription factor, possible; n=3;
Cryptosporidium|Rep: Transcription factor, possible -
Cryptosporidium parvum
Length = 311
Score = 34.7 bits (76), Expect = 1.9
Identities = 14/47 (29%), Positives = 23/47 (48%)
Frame = -2
Query: 317 LKPFVFVPIVPSVAYAHWLYLSLTKATVTTLSTCFCVFADTSAGVYC 177
L PF+ ++PS+ +++S+ K T L+ CFC G C
Sbjct: 220 LTPFLIFHLLPSIQAREEIFISINKTKQTGLAVCFCHHQKIEIGYVC 266
>UniRef50_A0TWY6 Cluster: LigA; n=1; Burkholderia cenocepacia
MC0-3|Rep: LigA - Burkholderia cenocepacia MC0-3
Length = 664
Score = 33.5 bits (73), Expect = 4.4
Identities = 19/58 (32%), Positives = 26/58 (44%)
Frame = +2
Query: 443 KKAEKARTKMLSDQAEARRNKVRRHASAARNVLPPRRRNCCRPSLEKTKPRLPLRSKH 616
++ E AR ++ RR V R A AAR PPRR +P P R++H
Sbjct: 185 RQPEPARLRIPEQAPRRRRRDVLRAARAARRTAPPRRVREQGSRAAPRRPARPRRARH 242
>UniRef50_Q2QMF8 Cluster: Spc97/Spc98 family protein, expressed;
n=6; Oryza sativa|Rep: Spc97/Spc98 family protein,
expressed - Oryza sativa subsp. japonica (Rice)
Length = 1139
Score = 33.5 bits (73), Expect = 4.4
Identities = 24/77 (31%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Frame = +3
Query: 27 LQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMI---KDGLVIKKPVAVHSRAR 197
LQ+ L + K W D E+N + + R + KM+ D LV+ +A H
Sbjct: 748 LQQFLVTIFDKLDKGNPWDDDFELNTLLQESIRNSADKMLLTAPDSLVVS--LAKHDTRN 805
Query: 198 VRKNTEARRKGRHCGFG 248
+ T RKGR GFG
Sbjct: 806 DEETTSISRKGRAQGFG 822
>UniRef50_UPI000051A765 Cluster: PREDICTED: similar to myosin IE;
n=1; Apis mellifera|Rep: PREDICTED: similar to myosin IE
- Apis mellifera
Length = 778
Score = 33.1 bits (72), Expect = 5.8
Identities = 23/76 (30%), Positives = 37/76 (48%), Gaps = 5/76 (6%)
Frame = +2
Query: 410 NKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVL---PPRRRNCCRPSLE 580
+K L+ ++ ++ + +TK L + NK+R AS N L P C +P+ E
Sbjct: 121 SKNSLVHKLYPQELQTNKTKTLKSRPTTAGNKIRNQASRLMNQLMKSTPHYIRCIKPN-E 179
Query: 581 KTKPR--LPLRSKHYV 622
+PR P+R KH V
Sbjct: 180 TKRPRDWDPVRVKHQV 195
>UniRef50_A5V4Q1 Cluster: Putative uncharacterized protein
precursor; n=1; Sphingomonas wittichii RW1|Rep: Putative
uncharacterized protein precursor - Sphingomonas
wittichii RW1
Length = 107
Score = 33.1 bits (72), Expect = 5.8
Identities = 15/40 (37%), Positives = 22/40 (55%)
Frame = -3
Query: 181 TATGFLMTRPSLIILRMFCLELVFAISLISFGSNHTFFLP 62
T +GF P+L+ L FCL + F + G N +FF+P
Sbjct: 25 TTSGFTNPIPTLLSLASFCLGVFFMARISQAGVNLSFFIP 64
>UniRef50_Q4RQC7 Cluster: Chromosome 17 SCAF15006, whole genome
shotgun sequence; n=1; Tetraodon nigroviridis|Rep:
Chromosome 17 SCAF15006, whole genome shotgun sequence -
Tetraodon nigroviridis (Green puffer)
Length = 340
Score = 32.7 bits (71), Expect = 7.6
Identities = 20/52 (38%), Positives = 27/52 (51%)
Frame = -2
Query: 245 KATVTTLSTCFCVFADTSAGVYCYRFLDDETILDHLTDVLSGVGVCDLIDFI 90
KA VT+L C F+D V+C F TI+DH + G +C L+ FI
Sbjct: 62 KANVTSLFICNLSFSDILVCVFCLPFTVIYTIMDHW---VFGSLLCRLVPFI 110
>UniRef50_Q8DFA7 Cluster: Flagellar motor protein MotB; n=31;
Gammaproteobacteria|Rep: Flagellar motor protein MotB -
Vibrio vulnificus
Length = 300
Score = 32.7 bits (71), Expect = 7.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -3
Query: 502 IAAGLSLVAKHLRPGLLSLLPVDVLHEHTLVLEHITLRLH 383
I G S++A+ RPG P+DV+ + T+ + TL H
Sbjct: 51 IPKGTSIIAQEFRPGRPEPTPIDVIMQQTIDITQQTLEFH 90
>UniRef50_A4RT88 Cluster: Predicted protein; n=1; Ostreococcus
lucimarinus CCE9901|Rep: Predicted protein -
Ostreococcus lucimarinus CCE9901
Length = 405
Score = 32.7 bits (71), Expect = 7.6
Identities = 14/41 (34%), Positives = 21/41 (51%)
Frame = -2
Query: 308 FVFVPIVPSVAYAHWLYLSLTKATVTTLSTCFCVFADTSAG 186
FV+ + P V +W YL+L V TC+C ++S G
Sbjct: 114 FVYTMVYPDVGSLYWFYLALLATCVPI--TCYCATEESSLG 152
>UniRef50_Q8IE44 Cluster: Putative uncharacterized protein
MAL13P1.150; n=3; Plasmodium|Rep: Putative
uncharacterized protein MAL13P1.150 - Plasmodium
falciparum (isolate 3D7)
Length = 500
Score = 32.7 bits (71), Expect = 7.6
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Frame = +2
Query: 356 DRHLYHSLYMKAKGNVF------KNKRVLMEYIHRKKAEKART-KMLSDQAEARRNKVRR 514
+ H Y M K N+F +NK ++ Y KK K R K+L Q + R+N
Sbjct: 331 NEHTYRKALMNLKKNIFTSLKRNRNKSIMDVYYEEKKKYKLRKQKLLELQTKIRKNSQIA 390
Query: 515 HASAAR 532
H+S R
Sbjct: 391 HSSIKR 396
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 616,707,008
Number of Sequences: 1657284
Number of extensions: 12236058
Number of successful extensions: 36870
Number of sequences better than 10.0: 45
Number of HSP's better than 10.0 without gapping: 35466
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36807
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47296372782
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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