Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= wdS00289
(636 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19 pro... 143 4e-34
S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19 pro... 143 4e-34
BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein pr... 143 4e-34
BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19 p... 143 4e-34
BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19 p... 143 4e-34
BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19 p... 143 4e-34
BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19 p... 143 4e-34
BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19 p... 143 4e-34
AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19 v... 143 4e-34
AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19 p... 116 9e-26
U17032-1|AAA95963.1| 1499|Homo sapiens p190-B protein. 31 2.6
BC050059-1|AAH50059.1| 1502|Homo sapiens ARHGAP5 protein protein. 31 2.6
BC032723-1|AAH32723.1| 1189|Homo sapiens ARHGAP5 protein protein. 31 2.6
AF327295-1|AAK37510.1| 47|Homo sapiens T cell receptor beta ch... 30 7.9
>X63527-1|CAA45090.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>S56985-1|AAB25672.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>BX537435-1|CAD97677.1| 205|Homo sapiens hypothetical protein
protein.
Length = 205
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 10 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 69
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 70 ARCRKNTLARRKGRHMGIGKRK 91
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 81 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 140
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 141 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 176
>BC095445-1|AAH95445.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>BC066315-1|AAH66315.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>BC062709-1|AAH62709.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>BC013016-1|AAH13016.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>BC000530-1|AAH00530.1| 196|Homo sapiens ribosomal protein L19
protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>AK223082-1|BAD96802.1| 196|Homo sapiens ribosomal protein L19
variant protein.
Length = 196
Score = 143 bits (347), Expect = 4e-34
Identities = 66/82 (80%), Positives = 73/82 (89%)
Frame = +3
Query: 12 MSSLKLQKRLAASVMRCGKKKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSR 191
MS L+LQKRLA+SV+RCGKKKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSR
Sbjct: 1 MSMLRLQKRLASSVLRCGKKKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSR 60
Query: 192 ARVRKNTEARRKGRHCGFGKRE 257
AR RKNT ARRKGRH G GKR+
Sbjct: 61 ARCRKNTLARRKGRHMGIGKRK 82
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 72 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 131
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 132 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 167
>AY157980-1|AAN76335.1| 173|Homo sapiens ribosomal protein L19
protein.
Length = 173
Score = 116 bits (278), Expect = 9e-26
Identities = 53/96 (55%), Positives = 68/96 (70%)
Frame = +2
Query: 224 KGSSLWLW*ERGTANARMPQKELWXXXXXXXXXXXXXXXTAKKIDRHLYHSLYMKAKGNV 403
KG + + +GTANARMP+K W +KKIDRH+YHSLY+K KGNV
Sbjct: 53 KGRHMGIGKRKGTANARMPEKVTWMRRMRILRRLLRRYRESKKIDRHMYHSLYLKVKGNV 112
Query: 404 FKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVR 511
FKNKR+LME+IH+ KA+KAR K+L+DQAEARR+K +
Sbjct: 113 FKNKRILMEHIHKLKADKARKKLLADQAEARRSKTK 148
Score = 112 bits (270), Expect = 9e-25
Identities = 51/63 (80%), Positives = 55/63 (87%)
Frame = +3
Query: 69 KKVWLDPNEINEIANTNSRQNIRKMIKDGLVIKKPVAVHSRARVRKNTEARRKGRHCGFG 248
KKVWLDPNE NEIAN NSRQ IRK+IKDGL+I+KPV VHSRAR RKNT ARRKGRH G G
Sbjct: 1 KKVWLDPNETNEIANANSRQQIRKLIKDGLIIRKPVTVHSRARCRKNTLARRKGRHMGIG 60
Query: 249 KRE 257
KR+
Sbjct: 61 KRK 63
>U17032-1|AAA95963.1| 1499|Homo sapiens p190-B protein.
Length = 1499
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 368 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPP 547
YH+ + K N KN EYI+ + KAR + ++ +R+ N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 548 RRRNCCRPSLEK 583
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>BC050059-1|AAH50059.1| 1502|Homo sapiens ARHGAP5 protein protein.
Length = 1502
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 368 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPP 547
YH+ + K N KN EYI+ + KAR + ++ +R+ N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 548 RRRNCCRPSLEK 583
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>BC032723-1|AAH32723.1| 1189|Homo sapiens ARHGAP5 protein protein.
Length = 1189
Score = 31.5 bits (68), Expect = 2.6
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = +2
Query: 368 YHSLYMKAKGNVFKNKRVLMEYIHRKKAEKARTKMLSDQAEARRNKVRRHASAARNVLPP 547
YH+ + K N KN EYI+ + KAR + ++ +R+ N L P
Sbjct: 286 YHATW-KTVSNKLKNHPDYEEYINLEGTRKARNTFSKHIEQLKQEHIRKRREEYINTL-P 343
Query: 548 RRRNCCRPSLEK 583
R N P+LE+
Sbjct: 344 RAFNTLLPNLEE 355
>AF327295-1|AAK37510.1| 47|Homo sapiens T cell receptor beta chain
protein.
Length = 47
Score = 29.9 bits (64), Expect = 7.9
Identities = 12/30 (40%), Positives = 17/30 (56%)
Frame = -2
Query: 257 LSLTKATVTTLSTCFCVFADTSAGVYCYRF 168
L+L AT + S FC +D+ G+Y Y F
Sbjct: 4 LTLESATSSQTSVYFCAISDSGTGIYGYTF 33
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 94,808,595
Number of Sequences: 237096
Number of extensions: 2006285
Number of successful extensions: 4303
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 4100
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4284
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6972732040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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